Citrus australasica cv. AZM genome v1.0

Overview
Analysis NameCitrus australasica cv. AZM genome v1.0
MethodIllumina, PacBio, Oxford Nanopore, (Assembly with SMARTdenovo, miniasm, NextDenovo)
SourceHuazhong Agriculture University
Date performed2023-12-21

 

About the assembly

For this genome, please cite Huang et al, Pangenome analysis provides insight into the evolution of the orange subfamily and a key gene for citric acid accumulation in citrus fruits.  This data was originally downloaded from the Citrus Pan-genome to Breeding Database.  This data is also on NCBI under BioProject PRJNA783181 and the assembly accession number is GCA_030449855.1.  The listed BioSample isolate designation is AZM.

Assembly metrics

Assembly size 358 Mb
Number of scaffolds 334
N50 1,859,419 bp
Predicted transcripts 47,342
Annotated genes 31,647
Assembly BUSCO score (embryophyta_odb10) 98.6%
Annotation BUSCO score (embryophyta_odb10) 97.0%