Overview
Analysis Name | BLAST: Citrus sinensis gene models CDS vs Malus x domestica v1.0 proteins |
Method | blastx (blastx 2.2.24 [Aug-08-2010]). NCBI blast |
Source | Csinensis_154_cds.fa vs Malus X domestica v1.0 peptides |
Date performed | 2011-02-04 |
C. sinensis CDS sequences were blasted against the Malus x domestica v1.0 proteins using blastx.
Properties
Additional information about this analysis:
Property Name | Value |
Analysis type | tripal_analysis_blast |
Analysis blast blastdb | 198 |
Analysis blast blastfile | /main/data/citrus/gbrowse/results/sinensis/proteins/apple |
Analysis blast blastparameters | -e 1e-6 -m 7 |
Analysis blast no parsed | all |
Analysis blast query re | ^(.*?)\|.*$ |
Analysis blast query type | mRNA |
Analysis blast query uniquename | 0 |
Analysis blast blastfile ext | out |
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