Overview
| Analysis Name | BLAST: Citrus sinensis gene models CDS vs Malus x domestica v1.0 proteins |
|---|
| Method | blastx (blastx 2.2.24 [Aug-08-2010]). NCBI blast |
|---|
| Source | Csinensis_154_cds.fa vs Malus X domestica v1.0 peptides |
|---|
| Date performed | 2011-02-04 |
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C. sinensis CDS sequences were blasted against the Malus x domestica v1.0 proteins using blastx.
Properties
Additional information about this analysis:
| Property Name | Value |
|---|
| Analysis type | tripal_analysis_blast |
| Analysis blast blastdb | 198 |
| Analysis blast blastfile | /main/data/citrus/gbrowse/results/sinensis/proteins/apple |
| Analysis blast blastparameters | -e 1e-6 -m 7 |
| Analysis blast no parsed | all |
| Analysis blast query re | ^(.*?)\|.*$ |
| Analysis blast query type | mRNA |
| Analysis blast query uniquename | 0 |
| Analysis blast blastfile ext | out |
|
