DY305229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305229 vs. ExPASy Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin carrier protein E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 3.403e-85 Identity = 145/161 (90.06%), Postives = 154/161 (95.65%), Query Frame = 2 Query: 35 MTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 517 M+SS APSRK LSKIA+NRLQKELVEWQ+NPP GFKHKVTDNLQRWIIEV GAPGTLYAN+T++LQVDFPEHYPME+PQVIFL PAPLHPHIYSNGHICLDILYDSWSPAMTVSS+CISILSMLSSST KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV Sbjct: 1 MSSSGAPSRKTLSKIATNRLQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161
BLAST of DY305229 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin carrier protein E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 5.804e-85 Identity = 144/161 (89.44%), Postives = 153/161 (95.03%), Query Frame = 2 Query: 35 MTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 517 MTSSS+PSRKALSKIA NRLQKEL EWQVNPP GFKH+VTDNLQ+W+IEV GAPGTLYANET+ LQV+FP+HYPMEAPQVIF+PPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSS KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV Sbjct: 1 MTSSSSPSRKALSKIACNRLQKELSEWQVNPPTGFKHRVTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSPEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161
BLAST of DY305229 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 308.531 bits (789), Expect = 2.439e-83 Identity = 141/161 (87.58%), Postives = 152/161 (94.41%), Query Frame = 2 Query: 35 MTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 517 MTSSSAPSRKALSKIA NRLQKEL EWQ+NPP GF+HKVTDNLQ+W I+V GAPGTLYANET++LQV+FPEHYPMEAPQV+F+ PAP HPHIYSNGHICLDILYDSWSPAMTV+SVCISILSMLSSS KQRPADNDRYVKNC+NGRSPKETRWWFHDDKV Sbjct: 1 MTSSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRHKVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLSSSPAKQRPADNDRYVKNCKNGRSPKETRWWFHDDKV 161
BLAST of DY305229 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin carrier protein E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 4.455e-77 Identity = 129/161 (80.12%), Postives = 149/161 (92.55%), Query Frame = 2 Query: 35 MTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 517 MTSSS +RK L+KIA+NRLQKE +EWQ NPP+GFKH+V+DNLQRWIIEV+G PGTLYANET++LQV+FPEHYPMEAPQVIF PAPLHPHIYSNGHICLD+LYDSWSPAM +SS+C+SILSMLSSS+VKQ+P DND Y+KNC++GRSPKETRW FHDDKV Sbjct: 1 MTSSSESTRKGLTKIATNRLQKEFMEWQTNPPSGFKHRVSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLSSSSVKQKPKDNDHYLKNCKHGRSPKETRWRFHDDKV 161
BLAST of DY305229 vs. ExPASy Swiss-Prot
Match: UBE2W_DICDI (Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum GN=ube2w PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.479e-44 Identity = 82/145 (56.55%), Postives = 104/145 (71.72%), Query Frame = 2 Query: 83 SNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 517 + RLQKEL++ + NPP DNL +W+I V+G G++Y E F+LQ F YP+++P+VIF+ P+HPHIYSNGHICL ILYD+WSPA+TVSSVC+SILSMLS T K RP D+ +YV N +SPKE RW FHDD V Sbjct: 6 AKRLQKELLDLKTNPPPCISITEGDNLDKWVIAVDGTEGSIYQGEHFKLQFKFSSGYPLDSPEVIFIGTPPIHPHIYSNGHICLSILYDNWSPALTVSSVCLSILSMLSGCTEKIRPTDDSKYVSRVLN-KSPKEVRWMFHDDTV 149
BLAST of DY305229 vs. ExPASy Swiss-Prot
Match: UBE2W_MOUSE (Probable ubiquitin-conjugating enzyme E2 W OS=Mus musculus GN=Ube2w PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 9.702e-40 Identity = 75/145 (51.72%), Postives = 103/145 (71.03%), Query Frame = 2 Query: 89 RLQKELVEWQVNPPAGF---KHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP-APLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRNGRSPKETRWWFHDD 511 RLQKEL+ Q +PP G + V +++ +WI+++ GAPGTLY E F+L F YP ++PQV+F P+HPH+YSNGHICL IL + WSPA++V SVC+SI+SMLSS K+RP DN YV+ C ++PK+T+WW+HDD Sbjct: 7 RLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPIHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRPPDNSFYVRTC--NKNPKKTKWWYHDD 149
BLAST of DY305229 vs. ExPASy Swiss-Prot
Match: UBE2W_HUMAN (Probable ubiquitin-conjugating enzyme E2 W OS=Homo sapiens GN=UBE2W PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.267e-39 Identity = 75/145 (51.72%), Postives = 103/145 (71.03%), Query Frame = 2 Query: 89 RLQKELVEWQVNPPAGF---KHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP-APLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRNGRSPKETRWWFHDD 511 RLQKEL+ Q +PP G + V +++ +WI+++ GAPGTLY E F+L F YP ++PQV+F P+HPH+YSNGHICL IL + WSPA++V SVC+SI+SMLSS K+RP DN YV+ C ++PK+T+WW+HDD Sbjct: 7 RLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRPPDNSFYVRTC--NKNPKKTKWWYHDD 149
BLAST of DY305229 vs. ExPASy Swiss-Prot
Match: UBE2W_DANRE (Probable ubiquitin-conjugating enzyme E2 W OS=Danio rerio GN=ube2w PE=2 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 3.687e-39 Identity = 76/145 (52.41%), Postives = 100/145 (68.97%), Query Frame = 2 Query: 89 RLQKELVEWQVNPPAGF---KHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP-APLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRNGRSPKETRWWFHDD 511 RLQKEL+ Q +PPAG + V + + W I++ GA GT+Y E F+L F YP E+PQV+F P+HPH+YSNGHICL IL + WSPA++V SVC+SI+SMLSS K+RP DN YVK C ++PK+T+WW+HDD Sbjct: 7 RLQKELLALQNDPPAGMTLNERSVQNTITEWFIDMEGAQGTVYEGEKFQLLFKFSSRYPFESPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRPPDNSFYVKTC--NKNPKKTKWWYHDD 149
BLAST of DY305229 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.037e-17 Identity = 50/111 (45.05%), Postives = 64/111 (57.66%), Query Frame = 2 Query: 77 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 406 +A R+QKEL + Q +PPA V D+L W + G P + Y F L V FP YP + P++ F HP+I SNG ICLDIL WSPA+TVS V +SI S+L Sbjct: 1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKI-YHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLL 110
BLAST of DY305229 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.037e-17 Identity = 50/111 (45.05%), Postives = 64/111 (57.66%), Query Frame = 2 Query: 77 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 406 +A R+QKEL + Q +PPA V D+L W + G P + Y F L V FP YP + P++ F HP+I SNG ICLDIL WSPA+TVS V +SI S+L Sbjct: 1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKI-YHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLL 110 The following BLAST results are available for this feature:
BLAST of DY305229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305229 ID=DY305229; Name=DY305229; organism=Citrus clementina; type=EST; length=748bpback to top |