DY305343

Overview
NameDY305343
Unique NameDY305343
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length802
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_BACCZ (Asparaginyl-tRNA synthetase OS=Bacillus cereus (strain ZK / E33L) GN=asnS PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.670e-56
Identity = 107/193 (55.44%), Postives = 141/193 (73.06%), Query Frame = 1
Query:    7 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 585
            ++L+H  ++MEF     DK+ + R+  V ++ F RITYT          + G  F+  VEWGIDL +EHERYL+E  F++PV V +YPK IKAFYMRLNDD KTVAA D+LVP +GELIGGSQREER DV+  RI+++G+  E Y WYL+LR++G  KH+GFGLGFER +++ TG+ NIRDVIPFPR PG ++
Sbjct:  273 YVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQ---ESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGIGELIGGSQREERMDVLVDRIKELGMNEEDYWWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRTPGSSE 462          
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_BACC1 (Asparaginyl-tRNA synthetase OS=Bacillus cereus (strain ATCC 10987) GN=asnS PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.670e-56
Identity = 107/193 (55.44%), Postives = 141/193 (73.06%), Query Frame = 1
Query:    7 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 585
            ++L+H  ++MEF     DK+ + R+  V ++ F RITYT          + G  F+  VEWGIDL +EHERYL+E  F++PV V +YPK IKAFYMRLNDD KTVAA D+LVP +GELIGGSQREER DV+  RI+++G+  E Y WYL+LR++G  KH+GFGLGFER +++ TG+ NIRDVIPFPR PG ++
Sbjct:  273 YVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQ---ESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGIGELIGGSQREERMDVLVDRIKELGMNEEDYWWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRTPGSSE 462          
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_BACAN (Asparaginyl-tRNA synthetase OS=Bacillus anthracis GN=asnS PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.670e-56
Identity = 107/193 (55.44%), Postives = 141/193 (73.06%), Query Frame = 1
Query:    7 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 585
            ++L+H  ++MEF     DK+ + R+  V ++ F RITYT          + G  F+  VEWGIDL +EHERYL+E  F++PV V +YPK IKAFYMRLNDD KTVAA D+LVP +GELIGGSQREER DV+  RI+++G+  E Y WYL+LR++G  KH+GFGLGFER +++ TG+ NIRDVIPFPR PG ++
Sbjct:  273 YVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQ---ESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGIGELIGGSQREERMDVLVDRIKELGMNEEDYWWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRTPGSSE 462          
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_XANC5 (Asparaginyl-tRNA synthetase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=asnS PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.182e-56
Identity = 105/192 (54.69%), Postives = 135/192 (70.31%), Query Frame = 1
Query:   10 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 585
            +LD   DD+ F+A+  DK+ I +L    + PFE+I YT            GK F+  VEWG+DL +EHER+LTE    +PV+V NYP+ IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER DV+ +R+   GL  E Y WY D RR+G+V H+GFGLGFER++++  G+ NIRD IP+PR PG A+
Sbjct:  275 VLDERGDDLAFLAERVDKNAITKLEAFINAPFEQIDYTEAVKLLQ---NSGKKFDFPVEWGLDLQTEHERWLTEEHIGRPVVVTNYPEHIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMAQFGLDKEHYSWYRDFRRYGSVPHAGFGLGFERLVVYVCGLSNIRDAIPYPRAPGSAE 463          
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_VIBF1 (Asparaginyl-tRNA synthetase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=asnS PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.182e-56
Identity = 107/186 (57.53%), Postives = 131/186 (70.43%), Query Frame = 1
Query:   28 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 585
            DD+EF A   DK  I RL    S+ F ++ YT            G+ FE  VEWGID++SEHERYL E  F+ PVIV NYPK IKAFYMR NDD KTVAAMDVL P +GE+IGGSQREER D++ +R+ +MG+  E   WY DLRR+GTV H+GFGLGFER++ + TG+ N+RDVIPFPR P  A+
Sbjct:  283 DDLEFFASRIDKQAITRLEQFVSSDFAQVDYTDAIQILKD---SGRDFEFDVEWGIDMSSEHERYLAEEHFKAPVIVKNYPKDIKAFYMRQNDDGKTVAAMDVLAPGIGEIIGGSQREERLDILDARMIEMGIDPEHMSWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSAN 465          
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_LEGPC (Asparaginyl-tRNA synthetase OS=Legionella pneumophila (strain Corby) GN=asnS PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.182e-56
Identity = 107/192 (55.73%), Postives = 135/192 (70.31%), Query Frame = 1
Query:   10 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 585
            +L+   DDM+F  +     CI R+  +A + FE +TYT          ++   FE  V WG+DL SEHERYL EV  +KPVIV NYP+ IK FYMRLNDD KTVAAMDVL P +GE+IGGSQREER +++  R+++  L  E Y+WY DLRR+GTV H+GFGLGFER+I + TG+ N+RDVIPFPR PG AD
Sbjct:  278 VLEERADDMDFFNQFVAPGCIERMEHIADSEFEMMTYTDAIKALEASDQK---FEFPVSWGLDLQSEHERYLAEVLCKKPVIVTNYPQEIKGFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLEILDRRMDECNLNKEHYQWYRDLRRYGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRTPGHAD 466          
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_CLOTE (Asparaginyl-tRNA synthetase OS=Clostridium tetani GN=asnS PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.182e-56
Identity = 108/194 (55.67%), Postives = 141/194 (72.68%), Query Frame = 1
Query:    4 DWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 585
            +++L++  ++M F     DK    RL  V ++ F+RITYT          K G+ F+  VEWGIDL +EHERY+TE  F KPV V +YPK IKAFYMRLN+D KTVAA D+LVP VGE+IGGSQREER DV++ R+++  L  + Y WYL+LR++G+ KHSGFGLGFER++++ TGI NIRDVIPFPR PG A+
Sbjct:  272 NYVLENAPEEMNFFNSFIDKDLFKRLDNVVNSEFKRITYTEAVDLLQ---KSGEKFQYPVEWGIDLQTEHERYITEKIFGKPVFVTDYPKDIKAFYMRLNEDNKTVAAADLLVPGVGEIIGGSQREERLDVLEERMKEFDLNEKDYWWYLELRKYGSAKHSGFGLGFERILMYMTGISNIRDVIPFPRTPGSAE 462          
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_CLOK5 (Asparaginyl-tRNA synthetase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=asnS PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.182e-56
Identity = 108/194 (55.67%), Postives = 138/194 (71.13%), Query Frame = 1
Query:    4 DWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 585
            +++L+   ++M F     DKS  +RL  V ++ F RITYT          K G  F+  VEWGIDL +EHERYLTE  F+KP+ V +YPK IKAFYMR N+D KTVAA D+LVP VGE++GGSQREER  V++ RI + GL  E Y WYL+LR++G  KHSGFGLGFER++++ TG+ NIRDVIPFPR PG A+
Sbjct:  272 NYVLEKAPEEMAFFNSFIDKSLFDRLNNVVNSEFGRITYTEAVDILQ---KSGASFQYPVEWGIDLQTEHERYLTEKVFEKPIFVTDYPKAIKAFYMRENEDGKTVAAADLLVPGVGEIVGGSQREERLSVLEKRISEFGLNKEDYWWYLELRKYGETKHSGFGLGFERILMYITGMSNIRDVIPFPRTPGSAE 462          
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_PSEA6 (Asparaginyl-tRNA synthetase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=asnS PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.849e-56
Identity = 108/186 (58.06%), Postives = 127/186 (68.28%), Query Frame = 1
Query:   28 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 585
            DDM F A+  +K  I RL  V    F R+ YT            GK FE  V WG+DL+SEHERYL E     P+I+ NYPK IKAFYMR+NDD KTVAAMDVL P +GE+IGGSQREER DV   R+ +MGL  E Y WY DLRR+GTV HSGFGLGFER++ + TG+ N+RDVI FPR PG A+
Sbjct:  282 DDMAFFAQRINKDAITRLEKVIEQDFVRMDYTDAIEILQNC---GKKFEFPVSWGVDLSSEHERYLAEEHVGAPIIMQNYPKDIKAFYMRINDDNKTVAAMDVLAPGIGEIIGGSQREERLDVFDRRLAEMGLDQEDYSWYRDLRRYGTVPHSGFGLGFERLVAYVTGMQNVRDVIAFPRTPGNAN 464          
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_PHOPR (Asparaginyl-tRNA synthetase OS=Photobacterium profundum GN=asnS PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.849e-56
Identity = 107/192 (55.73%), Postives = 134/192 (69.79%), Query Frame = 1
Query:   10 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 585
            +L+   DD+EF A+  +K  I RL    ++ F ++ YT            G+ FE  VEWGID++SEHERYL E  F+ PV+V NYPK IKAFYMR+NDD KTVAAMDVL P +GE+IGGSQREER + +  RI +MG+     EWY DLRR+GTV HSGFGLGFER++ + TG+ NIRDVIPFPR P  A+
Sbjct:  277 VLEERRDDLEFFAQRINKEAITRLEQFVTSDFAQVDYTDAIQILQD---SGRKFEFDVEWGIDMSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGSQREERLEHLDKRIAEMGIDASHIEWYRDLRRYGTVPHSGFGLGFERLVTYVTGMQNIRDVIPFPRAPRSAN 465          
The following BLAST results are available for this feature:
BLAST of DY305343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 320
Match NameE-valueIdentityDescription
SYN_BACCZ1.670e-5655.44Asparaginyl-tRNA synthetase OS=Bacillus cereus (st... [more]
SYN_BACC11.670e-5655.44Asparaginyl-tRNA synthetase OS=Bacillus cereus (st... [more]
SYN_BACAN1.670e-5655.44Asparaginyl-tRNA synthetase OS=Bacillus anthracis ... [more]
SYN_XANC52.182e-5654.69Asparaginyl-tRNA synthetase OS=Xanthomonas campest... [more]
SYN_VIBF12.182e-5657.53Asparaginyl-tRNA synthetase OS=Vibrio fischeri (st... [more]
SYN_LEGPC2.182e-5655.73Asparaginyl-tRNA synthetase OS=Legionella pneumoph... [more]
SYN_CLOTE2.182e-5655.67Asparaginyl-tRNA synthetase OS=Clostridium tetani ... [more]
SYN_CLOK52.182e-5655.67Asparaginyl-tRNA synthetase OS=Clostridium kluyver... [more]
SYN_PSEA62.849e-5658.06Asparaginyl-tRNA synthetase OS=Pseudoalteromonas a... [more]
SYN_PHOPR2.849e-5655.73Asparaginyl-tRNA synthetase OS=Photobacterium prof... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CA12RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305343 ID=DY305343; Name=DY305343; organism=Citrus clementina; type=EST; length=802bp
GGTGACTGGTTACTTGACCATTGCTTTGACGACATGGAGTTTATGGCTAA
AAATTATGATAAAAGTTGCATTAACCGTCTAAGAATGGTTGCTTCAACTC
CCTTTGAACGCATAACATACACTGAAGCAGTAGAGCTACTAGAGGTTGCT
GTGAAGGAGGGGAAACATTTTGAGAATAAAGTGGAGTGGGGGATTGATTT
GGCATCTGAGCATGAAAGATACTTAACTGAGGTCAAATTTCAGAAGCCTG
TCATTGTGTACAACTATCCAAAAGGAATCAAAGCATTTTACATGAGGCTC
AATGATGACTTGAAGACTGTGGCAGCTATGGATGTCCTTGTACCTAAGGT
AGGAGAGTTAATTGGTGGGAGCCAAAGGGAAGAGCGTTATGATGTAATCA
AGAGCAGAATAGAGGACATGGGACTCCCTCTTGAACCATACGAGTGGTAC
CTTGACCTGCGGCGCTTTGGGACAGTGAAACATAGTGGGTTTGGCTTAGG
CTTTGAACGGATGATTCTTTTTGCCACAGGCATCGACAACATTAGAGATG
TTATCCCCTTCCCAAGATATCCCGGAAGAGCAGATCTCTAATCTTGAATT
TGCAAACATGCCTTTTTGAAAAATCACTAGTTATTACATCTTTTGCTGAT
TCCAAACAATGTTAAACCAGGAAACCATAACATTGAAATTTATGTTTGCC
ATATTCTTAATGATAGAGATATTTTCTGGATTTGTCTTCTGCAAGCGTTT
ACGGCGGAATTATGATTTATTATTAGAGAATATATTAATAGAATTTTGAT
TG
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