DY305343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYNC1_ARATH (Asparaginyl-tRNA synthetase, cytoplasmic 1 OS=Arabidopsis thaliana GN=SYNC1 PE=2 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 2.309e-90 Identity = 157/195 (80.51%), Postives = 172/195 (88.21%), Query Frame = 1 Query: 4 DWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRADL 588 +WLL+ C+ DME MAKN+D CI+RL++VASTPF RITYT +GK F+N VEWGIDLASEHERYLTEV FQKP+IVYNYPKGIKAFYMRLNDD KTVAAMDVLVPKVGELIGGSQREERYDVIK RIE+MGLP+EPYEWYLDLRR+GTVKH GFGLGFERMILFATG+DNIRDVIPFPRYPG+ADL Sbjct: 378 NWLLEKCYADMELMAKNFDSGCIDRLKLVASTPFGRITYTKAIELLEEAVAKGKEFDNNVEWGIDLASEHERYLTEVLFQKPLIVYNYPKGIKAFYMRLNDDEKTVAAMDVLVPKVGELIGGSQREERYDVIKKRIEEMGLPIEPYEWYLDLRRYGTVKHCGFGLGFERMILFATGLDNIRDVIPFPRYPGKADL 572
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYNC3_ARATH (Asparaginyl-tRNA synthetase, cytoplasmic 3 OS=Arabidopsis thaliana GN=SYNC3 PE=2 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 4.983e-85 Identity = 154/196 (78.57%), Postives = 166/196 (84.69%), Query Frame = 1 Query: 7 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKH-FENKVEWGIDLASEHERYLTEVKF-QKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRADL 588 WL+D C DDME M KN D+ C RL MVA F+R+TYT +GK F+NKVEWGIDLASEHERYLTEV+F QKP+IVYNYPKGIKAFYMRLNDD KTVAAMDVLVPKVGELIGGSQREERYDVIK RIE+MGLP+EPYEWYLDLRR+GTVKH GFGLGFERMI FATGIDNIRDVIPFPRYPG+ADL Sbjct: 376 WLMDKCGDDMELMDKNVDEGCTKRLNMVAKASFKRVTYTEAIERLEKAVAQGKVVFDNKVEWGIDLASEHERYLTEVEFDQKPIIVYNYPKGIKAFYMRLNDDEKTVAAMDVLVPKVGELIGGSQREERYDVIKQRIEEMGLPMEPYEWYLDLRRYGTVKHCGFGLGFERMIQFATGIDNIRDVIPFPRYPGKADL 571
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_DESVV (Asparaginyl-tRNA synthetase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=asnS PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 7.741e-62 Identity = 116/192 (60.42%), Postives = 141/192 (73.44%), Query Frame = 1 Query: 10 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 585 +LD C D++ + D + + RLR +A PF R +YT K GK FE V +G+DL +EHERYL E F KPVIVYNYPK IKAFYMRLNDD +TVAAMDVLVP++GELIGGSQREER DV+++RI +MG LE Y WYLDLRRFG+V H+GFG+GFER+++ TGI NIRDVIPFPR PG + Sbjct: 272 ILDRCAADLDLFNRFVDTTLVERLRQIADEPFARCSYTEAIELLL---KSGKKFEYPVSFGLDLQTEHERYLAEEHFGKPVIVYNYPKEIKAFYMRLNDDGRTVAAMDVLVPRIGELIGGSQREERLDVLEARINEMGQNLEDYWWYLDLRRFGSVPHAGFGMGFERLLMLLTGITNIRDVIPFPRTPGNLE 460
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_DESVH (Asparaginyl-tRNA synthetase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=asnS PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 7.741e-62 Identity = 116/192 (60.42%), Postives = 141/192 (73.44%), Query Frame = 1 Query: 10 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 585 +LD C D++ + D + + RLR +A PF R +YT K GK FE V +G+DL +EHERYL E F KPVIVYNYPK IKAFYMRLNDD +TVAAMDVLVP++GELIGGSQREER DV+++RI +MG LE Y WYLDLRRFG+V H+GFG+GFER+++ TGI NIRDVIPFPR PG + Sbjct: 272 ILDRCAADLDLFNRFVDTTLVERLRQIADEPFARCSYTEAIELLL---KSGKKFEYPVSFGLDLQTEHERYLAEEHFGKPVIVYNYPKEIKAFYMRLNDDGRTVAAMDVLVPRIGELIGGSQREERLDVLEARINEMGQNLEDYWWYLDLRRFGSVPHAGFGMGFERLLMLLTGITNIRDVIPFPRTPGNLE 460
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_PARUW (Asparaginyl-tRNA synthetase OS=Protochlamydia amoebophila (strain UWE25) GN=asnS PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.252e-61 Identity = 115/193 (59.59%), Postives = 145/193 (75.13%), Query Frame = 1 Query: 7 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 585 ++LD+C +DMEF K+ I+RL V +T FER +YT K K FE V+WG+DL SEHER+L E F KPVI+ +YPK IKAFYMR N+D KTVAAMDVLVPKVGE+IGGSQREER V++S++++ LP E Y WYL+LR+FG+V HSGFG GFER++ F TG++NIRDVIPFPR+PG+AD Sbjct: 277 YVLDNCQEDMEFFNKHVATDLISRLEHVINTSFERASYTYAVRILE---KADKKFEYPVKWGLDLQSEHERFLAEEFFGKPVILTDYPKDIKAFYMRTNEDNKTVAAMDVLVPKVGEIIGGSQREERLSVLESKLKEFNLPAEEYWWYLELRKFGSVPHSGFGAGFERLVQFTTGMENIRDVIPFPRHPGKAD 466
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_ACTSZ (Asparaginyl-tRNA synthetase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=asnS PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.252e-61 Identity = 116/186 (62.37%), Postives = 137/186 (73.66%), Query Frame = 1 Query: 28 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 585 DD+EF +K+ DK I RL ++PF +I YT K GK FE V WGIDL+SEHERYL E F+ PV+V NYPKGIKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLR++GTV HSGFGLGFER+I++ TG+ NIRDVIPFPR P A+ Sbjct: 284 DDLEFFSKHVDKDVITRLEHFVNSPFAQIDYTDAIDVLV---KSGKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVVKNYPKGIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDKRMVEMGLKPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRSPRNAN 466
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_THEEB (Asparaginyl-tRNA synthetase OS=Thermosynechococcus elongatus (strain BP-1) GN=asnS PE=3 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.842e-61 Identity = 113/193 (58.55%), Postives = 140/193 (72.54%), Query Frame = 1 Query: 7 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 585 ++LDHC +DM F + D S + +A+ PF ++Y+ K G+ FE V WG+DL SEHERYL E Q+PVIVY+YP IKAFYMRLNDD KTVAAMD+L PK+GE+IGGSQREER+DV++ RI GL PY WYLDLRR+G+V H+GFGLGFER++ F TG+DNIRDVIPFPR PG A+ Sbjct: 272 YVLDHCPEDMAFFQERIDHSVMATAEQMATQPFAHLSYSEAIQVLE---KSGRAFEFPVAWGLDLQSEHERYLAEEYCQRPVIVYDYPAAIKAFYMRLNDDGKTVAAMDILAPKIGEIIGGSQREERFDVLQERIVTQGLDPAPYWWYLDLRRYGSVPHAGFGLGFERLVQFMTGMDNIRDVIPFPRTPGNAE 461
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_PORGI (Asparaginyl-tRNA synthetase OS=Porphyromonas gingivalis GN=asnS PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.018e-61 Identity = 109/193 (56.48%), Postives = 138/193 (71.50%), Query Frame = 1 Query: 7 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 585 W LD+C DD+ F+++++DK I+RL+ V PF R+ YT K G FE + WG DLASEHERYL EV F+ PVI+ +YPK IK+FYM+LNDD KTV MDVL PK+GE+IGGS+RE YD + +R +MG+P + WYLD RR+GT HSGFGLGFER++LF TG+ NIRDVIPFPR P A+ Sbjct: 276 WALDNCMDDISFLSEHFDKELIDRLKFVLEKPFVRLAYTEGIRILEEAVKNGVKFEFPIYWGADLASEHERYLVEVHFKTPVIMTDYPKEIKSFYMKLNDDGKTVRGMDVLFPKIGEIIGGSEREADYDKLVARANEMGVPEKDIWWYLDSRRYGTAPHSGFGLGFERLLLFVTGMSNIRDVIPFPRTPNNAE 468
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_PORG3 (Asparaginyl-tRNA synthetase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=asnS PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.018e-61 Identity = 109/193 (56.48%), Postives = 138/193 (71.50%), Query Frame = 1 Query: 7 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 585 W LD+C DD+ F+++++DK I+RL+ V PF R+ YT K G FE + WG DLASEHERYL EV F+ PVI+ +YPK IK+FYM+LNDD KTV MDVL PK+GE+IGGS+RE YD + +R +MG+P + WYLD RR+GT HSGFGLGFER++LF TG+ NIRDVIPFPR P A+ Sbjct: 276 WALDNCMDDISFLSEHFDKELIDRLKFVLEKPFVRLAYTEGIRILEEAVKNGVKFEFPIYWGADLASEHERYLVEVHFKTPVIMTDYPKEIKSFYMKLNDDGKTVRGMDVLFPKIGEIIGGSEREADYDKLVARANEMGVPEKDIWWYLDSRRYGTAPHSGFGLGFERLLLFVTGMSNIRDVIPFPRTPNNAE 468
BLAST of DY305343 vs. ExPASy Swiss-Prot
Match: SYN_COLP3 (Asparaginyl-tRNA synthetase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=asnS PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 3.252e-60 Identity = 111/185 (60.00%), Postives = 135/185 (72.97%), Query Frame = 1 Query: 28 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 582 DDM F + DK+ ++RL V +T F R+ YT GK FEN+V WG+DL SEHERYL E F PV++ NYPK IK+FYMRLNDD KTVAAMD+L P +GE+IGGSQREER DV+ SR+E+MGL + Y WY DLRR+GTV HSGFGLGFER++ +ATG+ N+RDVIPFPR P A Sbjct: 283 DDMAFFQQRVDKTVLDRLNSVINTDFVRLDYTDAITILENC---GKKFENQVSWGVDLNSEHERYLAEEHFNGPVVLQNYPKDIKSFYMRLNDDGKTVAAMDILAPGIGEIIGGSQREERLDVLDSRLEEMGLDIADYGWYRDLRRYGTVPHSGFGLGFERLVAYATGMQNVRDVIPFPRTPNNA 464 The following BLAST results are available for this feature:
BLAST of DY305343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305343 ID=DY305343; Name=DY305343; organism=Citrus clementina; type=EST; length=802bpback to top |