EH406224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH406224 vs. ExPASy Swiss-Prot
Match: PPR94_ARATH (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.149e-11 Identity = 39/134 (29.10%), Postives = 73/134 (54.48%), Query Frame = 3 Query: 9 MMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 410 ++D+M + G P++ T+ ++H L + EA ++ +M ++ G +P + TY VV C +D+A+ + +M+ + + +Y+T+I+ LC +DDA F EM + GIRP +S+L L + G Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307 HSP 2 Score: 68.1662 bits (165), Expect = 3.343e-11 Identity = 45/146 (30.82%), Postives = 77/146 (52.74%), Query Frame = 3 Query: 9 MMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 446 ++D+M + G P+ TY V++ L K G + A S+ K+M K E V Y ++ C +D A+ ++ EM +G+ P + YS+LI+ LC+ + DA + +M++ I P FS AL D ++E +V A+K+ Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME-KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFS----ALIDAFVKEGKLVEAEKL 350 HSP 3 Score: 66.6254 bits (161), Expect = 9.726e-11 Identity = 40/142 (28.17%), Postives = 74/142 (52.11%), Query Frame = 3 Query: 18 EMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA-LRDEGMEETAVVLAQ 440 +M G+ PN TY+I+L L K G+ +A VF+ + R EP + TY I++ C +V+ ++ + +GV P + Y+T+I+ C + ++A ++M + G P ++ L +A LRD E +A ++ + Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST-MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598
BLAST of EH406224 vs. ExPASy Swiss-Prot
Match: PP442_ARATH (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.149e-11 Identity = 37/120 (30.83%), Postives = 66/120 (55.00%), Query Frame = 3 Query: 3 YRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 362 Y ++ EM+K I + TY V+ + +G + AY++ K M G P V Y +++ F N++ AMR+ EMK +G+ P + Y++LI L ++D+A + EM++ G++P Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS-GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520 HSP 2 Score: 68.5514 bits (166), Expect = 2.559e-11 Identity = 37/123 (30.08%), Postives = 65/123 (52.85%), Query Frame = 3 Query: 18 EMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 386 EMR GI P+ +Y ++++ K G ++A S+F M + G P V Y +++ FC + +++ A + DEM +G+ P Y T+I+ C L +A + F EM G+ P +++ L Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE-GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
BLAST of EH406224 vs. ExPASy Swiss-Prot
Match: PP299_ARATH (Pentatricopeptide repeat-containing protein At4g01570 OS=Arabidopsis thaliana GN=At4g01570 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.149e-11 Identity = 40/132 (30.30%), Postives = 72/132 (54.55%), Query Frame = 3 Query: 39 GPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 434 GP+ TY+ ++H L G+ ++A V+ + + G EP STY I+++ C + ++D AMRI+ EM+ G +P +Y+ L++ K+ +AC+ F++M+ G+R ++ L L G E L Sbjct: 286 GPDICTYNSLIHVLCLFGKAKDALIVWDEL-KVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTL 416
BLAST of EH406224 vs. ExPASy Swiss-Prot
Match: PP105_ARATH (Pentatricopeptide repeat-containing protein At1g64580 OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.149e-11 Identity = 44/145 (30.34%), Postives = 75/145 (51.72%), Query Frame = 3 Query: 18 EMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 452 EM + + PN TY+ +++ G +A +F M K G P V TY ++ FC + +V+ M+++ EM +G++ Y+TLI+ C KL+ A K F M+D G+ P ++ L L + G E A+V+ + + K Sbjct: 279 EMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK-GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
BLAST of EH406224 vs. ExPASy Swiss-Prot
Match: PPR96_ARATH (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.500e-11 Identity = 47/154 (30.52%), Postives = 76/154 (49.35%), Query Frame = 3 Query: 6 RMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 467 ++ DEM K I P+ TY +++ R +EA +F+ M K P V TY +++ FC +V+ M ++ EM RG++ Y+TLI L D A K F++M+ G+ P +S L L G E A+V+ + + K + P Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD-CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498 HSP 2 Score: 67.781 bits (164), Expect = 4.366e-11 Identity = 38/134 (28.36%), Postives = 74/134 (55.22%), Query Frame = 3 Query: 9 MMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 410 ++D+M PN+ T++ ++H L + EA ++ RM + G +P + TY VV C +D+A+ + +M+ + + +Y+T+I++LC+ ++DA F EM + GIRP +++L + L + G Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304 HSP 3 Score: 66.6254 bits (161), Expect = 9.726e-11 Identity = 41/146 (28.08%), Postives = 78/146 (53.42%), Query Frame = 3 Query: 6 RMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA-LRDEGMEETAVVLAQ 440 ++ +M G+ P+ TY I+L L K G+ E+A VF+ + +K EP + TY I++ C +V+ ++ + +GV P + +Y+T+I+ C + ++A F+EM + G P ++ L +A LRD +A ++ + Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL-QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 595
BLAST of EH406224 vs. ExPASy Swiss-Prot
Match: PPR5_ARATH (Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.500e-11 Identity = 43/149 (28.86%), Postives = 76/149 (51.01%), Query Frame = 3 Query: 6 RMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE--PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 446 +++DEM K G+ PN+ TY++ L A ++ ++ RM G E P + +++MF + +VDMAMR+W++M +G + L++ LC K+++A K EM++ G RP F +K + + L QK+ Sbjct: 337 KLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRML---GNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQKM 482
BLAST of EH406224 vs. ExPASy Swiss-Prot
Match: PP190_ARATH (Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana GN=At2g37230 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.500e-11 Identity = 44/150 (29.33%), Postives = 73/150 (48.67%), Query Frame = 3 Query: 6 RMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDK 452 R ++M G+ P TY+++L + R E A F+ M + G P +T+ ++ FC ++D A +++ EMK + P + Y+T+I D++DD + F+EM GI P +S L L D G M E +L + K Sbjct: 241 RYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTR-GISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAK 389
BLAST of EH406224 vs. ExPASy Swiss-Prot
Match: PPR56_ARATH (Pentatricopeptide repeat-containing protein At1g22960, mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.960e-11 Identity = 41/132 (31.06%), Postives = 70/132 (53.03%), Query Frame = 3 Query: 9 MMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG----QLFSNLKQ 392 + DEM + + P+ TY ++++ KAGR E+A+ M +K G P V T+ ++ C +D A R +M+ G+ P + Y+ LI+ C +K ++ K ++EMLD I P G LF +L++ Sbjct: 572 LYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM-KKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
BLAST of EH406224 vs. ExPASy Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05665, mitochondrial OS=Arabidopsis thaliana GN=At1g05665 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.960e-11 Identity = 39/123 (31.71%), Postives = 68/123 (55.28%), Query Frame = 3 Query: 18 EMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 386 E + G+ N +Y+IV+H + + GR +EA+ + M K G P V +Y VV +C ++D ++ + MK +G+ P ++Y ++I LC KL +A + F EM+ GI P +++ L Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK-GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357
BLAST of EH406224 vs. ExPASy Swiss-Prot
Match: PPR9_ARATH (Pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.559e-11 Identity = 40/148 (27.03%), Postives = 74/148 (50.00%), Query Frame = 3 Query: 9 MMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 452 + EM + GI + +V+ L K G+ E Y+VF+ M RK G++P V+ Y +++ + + V+ A+R+ M G P + YS ++N LC ++++A YF G+ +S+L L G + A L +++ + Sbjct: 314 LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK-GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSE 460 HSP 2 Score: 67.781 bits (164), Expect = 4.366e-11 Identity = 34/117 (29.06%), Postives = 61/117 (52.14%), Query Frame = 3 Query: 6 RMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 356 R+ +EM + G +S Y+ ++ K + +EA ++FKRM + G + TV TY I++ + + A+++WD M +G+ P + L LC K+ ACK E+ +G+ Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGV 569 The following BLAST results are available for this feature:
BLAST of EH406224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406224 ID=EH406224; Name=EH406224; organism=Citrus clementina; type=EST; length=573bpback to top |