EH406265
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SYNY3 (Threonyl-tRNA synthetase OS=Synechocystis sp. (strain PCC 6803) GN=thrS PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.160e-52 Identity = 93/178 (52.25%), Postives = 135/178 (75.84%), Query Frame = 3 Query: 9 AFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRTT 539 AFYGPK+D +DAL R+WQ T+QVD+NLP+RFD+ Y+ ++ ++RP+MIHRA GSLER G+LIE YAGDFPLWL+PIQ R+L V+D L + +++++++ G+RAE+ G+RL K+IRNAEKQKIP+MAV+GAKEV+A + +R+R GELG + V + + ++++ N T Sbjct: 425 AFYGPKLDFIFQDALEREWQLGTVQVDYNLPERFDLEYIAADGSRQRPVMIHRAPFGSLERLIGILIEEYAGDFPLWLAPIQVRLLAVSDEFLPFAQSIVQQMQSLGLRAEVDTSGDRLGKMIRNAEKQKIPVMAVIGAKEVEANALNIRTRASGELGEIPVTEVLEKLQATVTNHDT 602
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_CLOTH (Threonyl-tRNA synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=thrS PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 8.209e-52 Identity = 91/177 (51.41%), Postives = 129/177 (72.88%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GAFYGPKID +ED++GR WQC TIQ+DF +P+RFD+ Y+ + EK RP+MIHR V GS+ERF +L EHYAG FP+WLSP+Q ++LP+ + Q +Y EV K L+ G+R E E++ IR A+ +K+P M V+G KE++ +TV VRSR G+LG M+++DF++RI A +N+ Sbjct: 457 GAFYGPKIDFHLEDSIGRTWQCGTIQLDFQMPERFDLTYIGPDGEKHRPVMIHRVVFGSIERFIAILTEHYAGAFPVWLSPVQVKILPILEKQHDYVAEVKKALEEKGVRVEADLRNEKIGYKIREAQLEKVPYMLVIGDKEMENRTVAVRSRKDGDLGPMRLEDFVNRIVEAIKNK 633
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_THISH (Threonyl-tRNA synthetase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=thrS PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.072e-51 Identity = 94/178 (52.81%), Postives = 132/178 (74.16%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GGAFYGPKID+KI DA+GR+WQCST+Q+DFNLP+RF++ YV ++ ++RPIMIHRA+LGS+ERFFGVLIEHYAG FPLWL+P+Q +VL +TD Q +Y EV +L+ GIRA+ E++ IR Q++P + V+G +E++ TV VR+R G +LG+M ++ R+ +R Sbjct: 459 GGAFYGPKIDIKIRDAIGREWQCSTVQLDFNLPERFEMEYVAEDNSRRRPIMIHRALLGSVERFFGVLIEHYAGSFPLWLAPVQVQVLTITDRQDDYAREVADRLRNRGIRADADLRNEKIGFKIREHTLQRVPYLLVLGDREMETNTVAVRTRSGEDLGSMDLNQLSERLAGEIASR 636
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_PELPD (Threonyl-tRNA synthetase OS=Pelobacter propionicus (strain DSM 2379) GN=thrS PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.388e-51 Identity = 96/176 (54.55%), Postives = 130/176 (73.86%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAE-ICHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATEN 530 GAFYGPKID+K++DAL R+WQC+TIQ DF LP+RFD+ YV ++ EKKRP+M+HR VLG++ERF GVLIEHYAG+FPLWLSP+QA ++ VTD + Y V++ L+ GIR + E+L IR A+ QK+P M V+G KE+++ TVT R R G L MK +DF++ + T+N Sbjct: 459 GAFYGPKIDIKLKDALDRRWQCATIQCDFTLPERFDLQYVAADGEKKRPVMVHRVVLGAIERFIGVLIEHYAGNFPLWLSPVQAMLVTVTDNHIPYAQGVLEHLREAGIRVQGDFRNEKLSFKIREAQLQKVPYMLVIGDKEMESATVTPRFRDGKNLVAMKPEDFVAFVVEETKN 634
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_THEEB (Threonyl-tRNA synthetase OS=Thermosynechococcus elongatus (strain BP-1) GN=thrS PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 5.321e-51 Identity = 93/172 (54.07%), Postives = 127/172 (73.84%), Query Frame = 3 Query: 9 AFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSA 521 AFYGPK+D EDALGR+WQ T+QVD+NLP+RFD+ YV ++ ++RP+MIHRA GSLER G+LIE YAGDFP WL+P Q R+LPV D Q Y V +L+ G+R + G+RL K IRNAE QKIP+M ++GAKEV+ +TV++R+R G++GT ++ I+++ SA Sbjct: 423 AFYGPKLDFIFEDALGREWQLGTVQVDYNLPERFDLEYVAEDNTRRRPVMIHRAPFGSLERLIGILIEEYAGDFPFWLAPEQVRLLPVGDEQRPYAERVAAQLRERGVRVSVDRSGDRLGKQIRNAETQKIPVMGIIGAKEVEHETVSIRTRAAGDVGTFALEHLIAKLTSA 594
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_CLOAB (Threonyl-tRNA synthetase OS=Clostridium acetobutylicum GN=thrS PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.949e-51 Identity = 90/177 (50.85%), Postives = 129/177 (72.88%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAE-ICHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GAFYGPKID ++D +GR WQC TIQ+DF +P+RFDI Y+ ++ EK RP+M+HR V GS+ERF G+LIEHYAG FP WL+P+Q +V+ +TD+Q+EY + + +KLK GIR E E++ IR A+ +K+P M V+G KE+ ++VRSR G+LG+M ++DFI RI + + + Sbjct: 457 GAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDINYIGADGEKHRPVMVHRVVFGSIERFIGILIEHYAGAFPTWLAPVQVKVMNITDSQVEYVDAISEKLKEAGIRVEKDVRNEKIGYKIREAQLKKVPYMIVIGDKEIKEGIISVRSRKEGDLGSMNIEDFIFRINAEVKEK 633
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_AQUAE (Threonyl-tRNA synthetase OS=Aquifex aeolicus GN=thrS PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.949e-51 Identity = 97/178 (54.49%), Postives = 131/178 (73.60%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GGAFYGPKID+KI DA+GR WQ STIQ DFNLP+RFD+ YV +++K RP MIHRA+LGS+ERF G+L+EHYAG P+WLSP Q ++P+ D EY +V + LK NGIRAE+ ER+ IR+AE +KIP++ VVG +E TV+VR++ G LG+M+++ F+ IK +N+ Sbjct: 460 GGAFYGPKIDVKIRDAIGRMWQLSTIQFDFNLPERFDMTYVGPDNKKHRPYMIHRALLGSIERFTGILLEHYAGLLPIWLSPTQVMIIPIADRHHEYAKKVYEFLKENGIRAEMDLREERMNAKIRDAELKKIPVILVVGDREAQNNTVSVRTKKEGNLGSMELNKFLDWIKEKIKNK 637
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_CLOD6 (Threonyl-tRNA synthetase OS=Clostridium difficile (strain 630) GN=thrS PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.185e-50 Identity = 93/180 (51.67%), Postives = 128/180 (71.11%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRTTM 542 GAFYGPKID ++D LGR WQC TIQ+D LP++FD Y+ + EK RP+MIHR GS+ERF G+LIEHYAG FP+WLSP Q ++LP++D ++Y NEV K+L GIR E+ E++ IR A+ +K+P M +VG KEV V+VRSR GE+G++K+D+FI+ I E+R ++ Sbjct: 457 GAFYGPKIDFHLKDCLGRTWQCGTIQLDMQLPRQFDNTYIGQDGEKHRPVMIHRVAFGSIERFIGILIEHYAGKFPVWLSPTQVKILPISDKFMDYANEVKKELFDKGIRVELDDRAEKIGFKIREAQLEKVPYMLIVGEKEVADNNVSVRSRDKGEIGSIKLDEFIASISKEIESRESI 636
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_CLOBL (Threonyl-tRNA synthetase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=thrS PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.185e-50 Identity = 89/178 (50.00%), Postives = 130/178 (73.03%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRT 536 GAFYGPKID ++D +GR WQC TIQ+DF +P+RFD+ Y+ ++ EK RP+M+HR + GS+ERF G+LIE YAG FP WL+P+Q +++ +TD+Q +Y +V + LK N IR EI E++ IR A+ QK+P M ++G KEV+A V VRSR G+LG + +++FI +IK+ +N+T Sbjct: 457 GAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQYAGAFPTWLAPVQVKLMNITDSQYDYLKKVEETLKENNIRVEIDTRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNEIKNKT 634
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_CLOBJ (Threonyl-tRNA synthetase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=thrS PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.185e-50 Identity = 89/178 (50.00%), Postives = 130/178 (73.03%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRT 536 GAFYGPKID ++D +GR WQC TIQ+DF +P+RFD+ Y+ ++ EK RP+M+HR + GS+ERF G+LIE YAG FP WL+P+Q +++ +TD+Q +Y +V + LK N IR EI E++ IR A+ QK+P M ++G KEV+A V VRSR G+LG + +++FI +IK+ +N+T Sbjct: 457 GAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQYAGAFPTWLAPVQVKLMNITDSQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNEIKNKT 634 The following BLAST results are available for this feature:
BLAST of EH406265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406265 ID=EH406265; Name=EH406265; organism=Citrus clementina; type=EST; length=737bpback to top |