EH406265
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SYNS3 (Threonyl-tRNA synthetase OS=Synechococcus sp. (strain CC9311) GN=thrS PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.598e-55 Identity = 105/178 (58.99%), Postives = 135/178 (75.84%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GGAFYGPKIDLKIEDA+GR WQCSTIQ+DFNLP+RF++ Y+ ++ K+RPIMIHRA+ GSLERFFG++ E+YAGDFP WL+P Q R+LPVTD L Y E +LK GIRA I G+RL KLIR EK KIP++AV+GAKE + ++RSR G+LG + + I+ +SA ++R Sbjct: 426 GGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFELDYIAADGSKQRPIMIHRAIFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVTDEVLGYAEEFQNQLKAAGIRASIDRSGDRLGKLIRIGEKMKIPVLAVIGAKEAEQGAASLRSRRDGDLGVITKERLIATAQSANQDR 603
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SYNS9 (Threonyl-tRNA synthetase OS=Synechococcus sp. (strain CC9902) GN=thrS PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.088e-55 Identity = 103/178 (57.87%), Postives = 133/178 (74.72%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GGAFYGPKIDLKIEDA+GR WQCSTIQ+DFNLP+RF + YV ++ K++PIMIHRA+ GSLERFFG++ E+YAGDFP WL+P Q R+LPVTD Y +V+ +LKT GIRA I G+RL K+IR E+ KIP++AV+GAKE + +++RSR G+LG VD + + A R Sbjct: 426 GGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFGLDYVAADGSKQQPIMIHRAIFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVTDDVQPYAEQVLNQLKTAGIRATIDQSGDRLGKIIRTGEQMKIPVLAVIGAKEAEQNAISLRSRRDGDLGVTSVDALLKAAQRANAER 603
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SYNSC (Threonyl-tRNA synthetase OS=Synechococcus sp. (strain CC9605) GN=thrS PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 7.933e-55 Identity = 100/178 (56.18%), Postives = 133/178 (74.72%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GGAFYGPKIDLKIEDA+GR WQCSTIQ+DFNLP+RF++ Y+ ++ K+RPIMIHRA+ GSLERFFG++ E+YAGD+P WL+P Q R+LPVTD Y +++ +L G+RA + G+RL KLIR E+ KIP++AV+GAKE + V++RSR G+LG V D +S + A R Sbjct: 426 GGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFELDYIAADGSKQRPIMIHRAIFGSLERFFGIMTENYAGDYPFWLAPEQVRLLPVTDEVQPYAEQLLDQLTKAGVRATVDRSGDRLGKLIRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVTAVSDLLSAAQMANSER 603
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SYNP6 (Threonyl-tRNA synthetase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=thrS PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.353e-54 Identity = 97/172 (56.40%), Postives = 134/172 (77.91%), Query Frame = 3 Query: 9 AFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSA 521 AFYGPK+D +DAL R+WQ T+QVD+NLP+RFD+ YV + ++RP+MIHRA GSLER G+LIE YAGDFPLWL+P Q R+LPVT+T L+YC +V +L+ G+R ++ C G+RL KLIRNAEK KIP+MAV+GA+E +++T+++R+R G+LG++ V D R+ SA Sbjct: 428 AFYGPKLDFIFQDALDREWQLGTVQVDYNLPERFDLEYVAEDGSRQRPVMIHRAPFGSLERLIGILIEEYAGDFPLWLAPEQIRLLPVTETVLDYCQQVADQLRAIGVRVQVDCSGDRLGKLIRNAEKAKIPVMAVIGAQEAESETLSIRTRATGDLGSLTVADLTKRLSSA 599
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SYNE7 (Threonyl-tRNA synthetase OS=Synechococcus elongatus (strain PCC 7942) GN=thrS PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.353e-54 Identity = 97/172 (56.40%), Postives = 134/172 (77.91%), Query Frame = 3 Query: 9 AFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSA 521 AFYGPK+D +DAL R+WQ T+QVD+NLP+RFD+ YV + ++RP+MIHRA GSLER G+LIE YAGDFPLWL+P Q R+LPVT+T L+YC +V +L+ G+R ++ C G+RL KLIRNAEK KIP+MAV+GA+E +++T+++R+R G+LG++ V D R+ SA Sbjct: 425 AFYGPKLDFIFQDALDREWQLGTVQVDYNLPERFDLEYVAEDGSRQRPVMIHRAPFGSLERLIGILIEEYAGDFPLWLAPEQIRLLPVTETVLDYCQQVADQLRAIGVRVQVDCSGDRLGKLIRNAEKAKIPVMAVIGAQEAESETLSIRTRATGDLGSLTVADLTKRLSSA 596
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SYNPW (Threonyl-tRNA synthetase OS=Synechococcus sp. (strain WH7803) GN=thrS PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.767e-54 Identity = 101/178 (56.74%), Postives = 133/178 (74.72%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GGAFYGPKIDLKIEDA+GR WQCSTIQ+DFNLP+RF + Y+ ++ K+RPIMIHRA+ GSLERFFG++ E+YAGD+PLWL+P Q R+LPVTD Y ++ +L G+RA I G+RL KLIR E+ KIP++AV+GAKE + V++RSR G+LG + V D + ++A R Sbjct: 426 GGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFKLDYIAADGSKQRPIMIHRAIFGSLERFFGIMTENYAGDYPLWLAPEQVRLLPVTDEVQPYAESLLDQLTQAGVRATIDRSGDRLGKLIRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVVAVADLLRAAQNANSQR 603
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SYNPX (Threonyl-tRNA synthetase OS=Synechococcus sp. (strain WH8102) GN=thrS PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.014e-54 Identity = 102/178 (57.30%), Postives = 131/178 (73.60%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GGAFYGPKIDLKIEDA+GR WQCSTIQ+DFNLP+RF + YV ++ K+RPIMIHRA+ GSLERFFG++ E+YAGD+P WL+P Q R+LPVTD Y ++ +L G+RA I G+RL KLIR E+ KIP++AV+GAKE + V++RSR G+LG V D + +SA R Sbjct: 426 GGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFKLDYVAADGSKQRPIMIHRAIFGSLERFFGIMTENYAGDYPFWLAPEQVRLLPVTDEVQPYAESLLDQLTQAGVRATIDRSGDRLGKLIRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVAAVADLLRAAESANSQR 603
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SULSY (Threonyl-tRNA synthetase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=thrS PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.496e-53 Identity = 99/178 (55.62%), Postives = 129/178 (72.47%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GGAFYGPKID+KI+DA+GR WQCSTIQ DFNLP+RFD+ Y+ +++K RP MIHRA+ GS+ERF GVL+EHYAG P+WLSP+Q +++P+ D LEY V +KL N IR E+ ER+ K IR+AE QKIP M VVG KE + TV VR + T+ +D+F+S+IK N+ Sbjct: 463 GGAFYGPKIDVKIKDAIGRLWQCSTIQFDFNLPERFDMYYIGEDNQKHRPYMIHRAIFGSIERFIGVLLEHYAGFLPVWLSPVQVKIIPIADKHLEYAETVKQKLLENDIRVELDDRNERMNKKIRDAELQKIPFMLVVGDKEAETGTVAVREKGKQGSQTLSIDEFVSKIKEIISNK 640
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_GEOSL (Threonyl-tRNA synthetase OS=Geobacter sulfurreducens GN=thrS PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.333e-53 Identity = 98/168 (58.33%), Postives = 128/168 (76.19%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAE-ICHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFIS 506 GAFYGPKID+K+ D+L RKWQC+TIQ DF LP+RFD+ YVD++ E+KRP+M+HR +LGS+ERF GVLIEH+AG+FPLWLSP+QA VL VTD Q Y +V + L+TNG+R + E+L IR A+ QKIP M V+G KEV++ TVT R R G L MK ++F++ Sbjct: 459 GAFYGPKIDIKLRDSLDRKWQCATIQCDFTLPERFDLTYVDADGERKRPVMVHRVILGSIERFIGVLIEHFAGNFPLWLSPVQAIVLTVTDNQQPYAAQVFETLRTNGVRVQKDFRNEKLGFKIREAQLQKIPYMLVIGDKEVESGTVTPRFRDGSNLAAMKPEEFVA 626
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_CLONN (Threonyl-tRNA synthetase OS=Clostridium novyi (strain NT) GN=thrS PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 7.425e-53 Identity = 92/178 (51.69%), Postives = 127/178 (71.35%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRT 536 GAFYGPKID + D LGR WQC TIQ+DF +P+RFD+ YV ++ EK RP+M HR + GS+ERF G+L EHYAG FP WL+P+Q +++ +TD Q+EYC E+ K L NGIR E+ E++ IR A+ QKIP M V+G KE++ +T+ VR+R G+LG M + DF++ +K E +T Sbjct: 457 GAFYGPKIDFHLRDCLGRTWQCGTIQLDFQMPERFDLSYVGADGEKHRPVMAHRVIFGSIERFIGILTEHYAGAFPTWLAPVQVKIMNITDNQVEYCKEIQKVLNENGIRVELDLRNEKIGYKIREAQLQKIPYMLVLGDKEMNEKTIAVRARKQGDLGAMNLTDFVAMVKKEIEEKT 634 The following BLAST results are available for this feature:
BLAST of EH406265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406265 ID=EH406265; Name=EH406265; organism=Citrus clementina; type=EST; length=737bpback to top |