EH406265
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_DICNV (Threonyl-tRNA synthetase OS=Dichelobacter nodosus (strain VCS1703A) GN=thrS PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.569e-47 Identity = 85/178 (47.75%), Postives = 124/178 (69.66%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRT 536 GAFYGPKI+ ++D+LGR+WQC T+Q+DF++P R Y+D + EK+ P+MIHRA+LGSLERF G+LIE YAG+ P+WLSP+QA ++P+TDT +Y V++K GIRAEI E++ IR Q++P + V G +E + T++VR+R G ELG M++ I I+ E ++ Sbjct: 459 GAFYGPKIEFTLKDSLGRRWQCGTVQLDFSMPARLGAEYIDEHGEKQTPVMIHRAILGSLERFIGILIEQYAGNMPVWLSPVQAMIMPITDTHADYVQNVMQKFIAAGIRAEIDLRNEKISYKIREHTLQRVPFLLVAGDREKQSNTLSVRTRDGKELGVMEIATIIEHIRHLIETKS 636
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_DESMR (Threonyl-tRNA synthetase OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=thrS PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.569e-47 Identity = 89/165 (53.94%), Postives = 119/165 (72.12%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDD 497 GAFYGPKID+K++DAL R+WQC+TIQ DF LP+RFD+VY D++ E+KRP+M+HR +LG++ERF GVLIEH AG P WLSP+QAR+L VTD Q E+ + + +LK GIR E+ E+L +R A+ +KIP M V G KE + + VR R G LG +D+ Sbjct: 458 GAFYGPKIDIKLKDALDRRWQCATIQCDFTLPERFDLVYTDADGERKRPVMLHRVILGAVERFLGVLIEHTAGALPTWLSPVQARILIVTDAQKEFAEQALARLKEAGIRVELDDRNEKLGFKVREAQVEKIPYMLVAGDKEKELGGLNVRLRSGENLGVKTLDE 622
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_THETN (Threonyl-tRNA synthetase OS=Thermoanaerobacter tengcongensis GN=thrS PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.661e-47 Identity = 84/170 (49.41%), Postives = 124/170 (72.94%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRI 512 GAFYGPKID ++D++GR WQC TIQ+DF +P+RF++ Y+ + EK RPIM+HR + GS+ERF G+L EH+AG FP WL+P+Q RVLP+++ EY +V ++L+ + IR E+ E++ IR A+ QKIP M +VG +EV+ V++RSR G+LG + +D+FI +I Sbjct: 466 GAFYGPKIDFHLKDSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAGAFPTWLAPVQVRVLPISEKHHEYARKVYERLQEHDIRVELDDRNEKIGYKIREAQLQKIPYMLIVGDREVEEGNVSLRSRKDGDLGPISLDNFIEKI 635
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_DESAA (Threonyl-tRNA synthetase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=thrS PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.661e-47 Identity = 92/177 (51.98%), Postives = 122/177 (68.93%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GAFYGPKID+ I+DALGR WQC TIQ+D NLP+RFD+ YV +++++ RP+MIHR + GS+ERF G+LIEHYAG FPLWLSP QA VL + D Y EV +L+ G+R EI E + K +R+A+ KIPLM VG KE AQT+ VR+ G + +D+F+ ++ E R Sbjct: 453 GAFYGPKIDIHIKDALGRTWQCGTIQLDMNLPERFDLTYVGADNQRHRPVMIHRVIYGSIERFLGILIEHYAGKFPLWLSPCQAVVLAMNDDVAGYAKEVKARLEEAGLRMEIDLRAESINKKVRDAQLSKIPLMLTVGGKEEAAQTLAVRTLDGKVKYGVTIDNFLDKVLPHIETR 629
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_CHLT3 (Threonyl-tRNA synthetase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=thrS PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 6.088e-47 Identity = 91/171 (53.22%), Postives = 126/171 (73.68%), Query Frame = 3 Query: 9 AFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEIC-HGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKS 518 +FYGPKID + DA+GRKWQ T+QVD+ +P+RFD+ YV S+ +K RP++IHRA GSLERF G+LIE++AG+FP+WLSP+Q VLP+TD +Y + V++KL GIRAEI GE++ K IR+AE +KIP M VVG KE+ A +V VR G+ GTM + + I +++ Sbjct: 481 SFYGPKIDFIVRDAIGRKWQLGTVQVDYVMPERFDLTYVGSDGQKHRPVVIHRAPFGSLERFIGILIENFAGNFPVWLSPVQVMVLPITDDFRDYAHSVLQKLLDAGIRAEIDERGEKVGKKIRDAEIKKIPYMFVVGEKEMAAASVAVRRHKEGDKGTMPLQEAIRLLQT 651
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_THET8 (Threonyl-tRNA synthetase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=thrS PE=1 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.951e-47 Identity = 91/166 (54.82%), Postives = 120/166 (72.29%), Query Frame = 3 Query: 9 AFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFI 503 AFYGPK+D ++DALGR+WQ TIQVD+NLP+RF + YV + E+ RP+M+HRA GSLERF G+LIEH+AGDFPLWL+P+QA V+PV++ Q +Y EV +LK G+RAE ER+ IR+AE QK+P + VVG +E V+VR R G LGTM + F+ Sbjct: 478 AFYGPKLDFVVKDALGREWQLGTIQVDYNLPERFGLTYVGKDGEEHRPVMLHRAPFGSLERFIGILIEHFAGDFPLWLAPVQAVVVPVSEKQEDYAREVAGRLKEAGLRAEADTRPERMQARIRDAEVQKVPYILVVGEREKAEGAVSVRRRKKGNLGTMPLAAFL 643
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_RHOOB (Threonyl-tRNA synthetase OS=Rhodococcus opacus (strain B4) GN=thrS PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.951e-47 Identity = 88/168 (52.38%), Postives = 122/168 (72.62%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFI 503 G AFYGPKI ++++DALGR WQ STIQ+DFNLP+RFD+ Y S+ KKRP+MIHRA+ GS+ERFFGVL EHYAG FP WL+P+Q +PV +T ++ +V+K+LK G+RAE+ +R+ K I N QK+P M + GA++V+A V+ R R G ++ + VDD + Sbjct: 492 GAAFYGPKISVQVQDALGRTWQMSTIQLDFNLPERFDLEYTASDGTKKRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVAETFADHLFDVVKRLKAAGVRAEVDASDDRMQKKIFNNTAQKVPFMLLAGARDVEAGAVSFRFRDGTQVNGVPVDDAV 659
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_PETMO (Threonyl-tRNA synthetase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=thrS PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.951e-47 Identity = 86/177 (48.59%), Postives = 124/177 (70.06%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICHGE-RLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GAFYGPKID + D+LGRKWQC+TIQ+DF +P+RFD+VY D N +KRP+MIHRA+ GSLERFFG+LIE++AG+FP WLSP+Q +LPV++ E + + L+ GIR + + + IRN + +K+P M V G KE+++ T+ +R+R G + + + FI IK+ +NR Sbjct: 458 GAFYGPKIDFNVTDSLGRKWQCTTIQLDFQMPERFDMVYADENDAQKRPVMIHRAIFGSLERFFGILIENFAGEFPTWLSPVQVSILPVSEKFNEEAKKFSRILEQEGIRVYVNDSDATVGYKIRNEQMKKVPYMIVFGEKEMNSDTINIRTRKGDTIENVSKERFIEEIKNEIKNR 634
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_DESAD (Threonyl-tRNA synthetase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=thrS PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.951e-47 Identity = 89/175 (50.86%), Postives = 126/175 (72.00%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATE 527 GAFYGPKID+ I+DAL R+WQC+TIQ DF LP+RFD+ YV + E+ RP+M+HR +LGS+ERF GVL+EH G P WLSP+QA++L VTD+Q E+ +V++ L+ GIRAE+ E+L +R A+ +KIP M V+G KEV A++V VR+R G + G +++ I +A + Sbjct: 455 GAFYGPKIDIIIKDALERRWQCATIQCDFTLPERFDLSYVGEDGERHRPVMLHRVILGSIERFIGVLLEHTGGALPAWLSPVQAKILTVTDSQNEFAQKVLQFLREKGIRAEVDDRNEKLGYKVREAQLEKIPYMLVIGDKEVAAESVNVRARDGEDPGLKSLEEAAELISTAID 629
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_CAMC5 (Threonyl-tRNA synthetase OS=Campylobacter curvus (strain 525.92) GN=thrS PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.951e-47 Identity = 86/172 (50.00%), Postives = 125/172 (72.67%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEIC-HGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIK 515 GGAFYGPKID+KI DAL RKWQC TIQVDFNLP+RFD+ Y+D+N+E++RP+M+HRA+LGS ERF G+LIEH AG+ P +++P Q ++P++D L+Y E+ ++L+ I +E+ E L K IR AEKQ++P++ V+G EV ++V +R R M + +F++ K Sbjct: 427 GGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFDLGYIDANNERQRPVMLHRALLGSFERFIGILIEHTAGELPFFIAPTQVVIVPISDAHLDYAKEIARELRKFNIDSEVASKNESLNKRIRTAEKQRVPMIIVLGDNEVANRSVALRDRQARTQSDMSLAEFLNLTK 598 The following BLAST results are available for this feature:
BLAST of EH406265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406265 ID=EH406265; Name=EH406265; organism=Citrus clementina; type=EST; length=737bpback to top |