EH406265
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_CAMC1 (Threonyl-tRNA synthetase OS=Campylobacter concisus (strain 13826) GN=thrS PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.038e-46 Identity = 85/172 (49.42%), Postives = 125/172 (72.67%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEIC-HGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIK 515 GGAFYGPKID+KI DAL RKWQC TIQVDFNLP+RFD+ Y+D+N+E++RP+M+HRA+LGS ERF G+L+EH AG+ P +++P Q ++P++D L+Y E+ ++L+ + +EI E L K IR AEKQ++P++ V+G EV ++V +R R M + +F++ K Sbjct: 427 GGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFDLGYIDANNERQRPVMLHRALLGSFERFIGILLEHTAGELPFFIAPTQVVIVPISDAHLDYAKEISRELRKINVDSEIASKNESLNKRIRTAEKQRVPMIVVLGDNEVANKSVALRDRQARTQSDMSLAEFVNLTK 598
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_STRAW (Threonyl-tRNA synthetase OS=Streptomyces avermitilis GN=thrS PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.356e-46 Identity = 85/179 (47.49%), Postives = 123/179 (68.72%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRT 536 G AFYGPKI ++ +DA+GR WQ ST+Q+DFNLP+RFD+ Y + K+RP+MIHRA+ GS+ERFF VL+EHYAG FP WL+P+QA +P+ D +EY + + K G+R E+ +R+ K IRNA+KQK+P M + G +++ A V+ R R G + + +D+ I++I E RT Sbjct: 478 GAAFYGPKISVQAKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGSKQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDAHVEYLQKFAAEAKKKGLRVEVDSSSDRMQKKIRNAQKQKVPFMVIAGDEDMTAGAVSFRYRDGSQENGIPLDEAIAKIAKVVEERT 656
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_KOSOT (Threonyl-tRNA synthetase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=thrS PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.356e-46 Identity = 82/177 (46.33%), Postives = 125/177 (70.62%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICHGERLPKL-IRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GAFYGPKID + D++GR+WQC+TIQ+DF +P+RF++ YV ++++ RP+MIHRA+ GSL+RFFG+LIEHYAG FP WL+P+Q +P++D ++Y EV L G+R ++ ++ IR A+ KIP M ++G KE +++T+TVR R G + MK+ +F +++K NR Sbjct: 461 GAFYGPKIDFHVTDSIGREWQCATIQLDFMMPERFELTYVGPDNKEYRPVMIHRAIYGSLDRFFGILIEHYAGAFPTWLAPVQVVAIPISDKHVDYAREVADALAAEGVRVDVDEKQKSTNYKIREAQLNKIPYMLILGDKEKESETITVRLRTGKNIYGMKLAEFSAKLKEEISNR 637
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_PELCD (Threonyl-tRNA synthetase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=thrS PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.771e-46 Identity = 90/166 (54.22%), Postives = 115/166 (69.28%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDF 500 GAFYGPKID+K++DAL R+WQC+TIQ DF LP+RFD+ YV + EK RP+M+HR +LG++ERF GVLIEHYAG+FPLWL+P+QA V+ VTD Q +Y V L+ G+R + E+L IR A+ KIP M VVG E+ TV R R G L M +DF Sbjct: 461 GAFYGPKIDIKLKDALDRRWQCATIQCDFTLPERFDLTYVGKDGEKHRPVMLHRVILGAIERFIGVLIEHYAGNFPLWLAPVQAVVINVTDNQADYAKSVSDALRAAGVRVQCDLRNEKLGFKIREAQVDKIPYMLVVGDTEMSDGTVAPRFRSGKNLEPMSPEDF 626
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_CAMLR (Threonyl-tRNA synthetase OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=thrS PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.771e-46 Identity = 89/172 (51.74%), Postives = 122/172 (70.93%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIK 515 GGAFYGPKID+KI DAL RKWQC TIQVDFNLP RF + Y D+++EKK+P+M+HRA+LGS ERF G+LIEH AG+ P +++P Q ++P++ EY E+ KKL GI +E+ E L K IR AEK +P++ V+G +EV ++V +R R E T+ +D+FI+ K Sbjct: 424 GGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYTDADNEKKQPVMLHRAILGSFERFIGILIEHCAGELPFFIAPTQVAIVPISQNHHEYAKEIAKKLLELGIDSEVYSKNESLNKKIRTAEKAHVPMILVLGDEEVANKSVALRDRRAKEQKTLTLDEFITLTK 595
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_THET2 (Threonyl-tRNA synthetase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=thrS PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.313e-46 Identity = 91/166 (54.82%), Postives = 119/166 (71.69%), Query Frame = 3 Query: 9 AFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFI 503 AFYGPK+D ++DALGR+WQ TIQVD+NLP+RF + YV + E+ RP+M+HRA GSLERF G+LIEH+AGDFPLWL+P+QA V+PV++ Q Y EV +LK G+RAE ER+ IR+AE QK+P + VVG +E V+VR R G LGTM + F+ Sbjct: 478 AFYGPKLDFVVKDALGREWQLGTIQVDYNLPERFGLTYVGKDGEEHRPVMLHRAPFGSLERFIGILIEHFAGDFPLWLAPVQAVVVPVSEKQEGYAREVAGRLKEAGLRAEADTRPERMQARIRDAEVQKVPYVLVVGEREKAEGAVSVRRRKKGNLGTMPLAAFL 643
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_ALHEH (Threonyl-tRNA synthetase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=thrS PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.946e-46 Identity = 90/172 (52.33%), Postives = 118/172 (68.60%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKS 518 GAFYGPKI+ ++D LGR WQ TIQVDF++P R YV + KK P+M+HRA+LGSLERF G+LIEHYAG P WL+P+QA VL +TD Q EY + K+ + G+R + E++ IR QK+P M VVG KEV+ TV VR+R G +LG+M VDDF+ R++S Sbjct: 458 GAFYGPKIEFTLKDCLGRTWQLGTIQVDFSMPGRLGATYVAEDGSKKVPVMLHRAILGSLERFIGILIEHYAGALPPWLAPVQAVVLNITDRQGEYARRIEKRFRERGLRVDADLRNEKIGFKIREHTLQKVPYMLVVGDKEVENNTVAVRTREGQDLGSMAVDDFLQRLES 629
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_RHOSR (Threonyl-tRNA synthetase OS=Rhodococcus sp. (strain RHA1) GN=thrS PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.154e-46 Identity = 86/168 (51.19%), Postives = 122/168 (72.62%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFI 503 G AFYGPKI ++++DALGR WQ STIQ+DFNLP+RFD+ Y ++ K+RP+MIHRA+ GS+ERFFGVL EHYAG FP WL+P+Q +PV +T ++ +V+K+LK G+RAE+ +R+ K I N QK+P M + GA++V+A V+ R R G ++ + VDD + Sbjct: 492 GAAFYGPKISVQVQDALGRTWQMSTIQLDFNLPERFDLEYTANDGTKQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVAETFADHLFDVVKRLKAAGVRAEVDASDDRMQKKIFNNTAQKVPFMLLAGARDVEAGAVSFRFRDGTQVNGVPVDDAV 659
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_FRATN (Threonyl-tRNA synthetase OS=Francisella tularensis subsp. novicida (strain U112) GN=thrS PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.154e-46 Identity = 81/166 (48.80%), Postives = 118/166 (71.08%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDF 500 GAFYGPKI+ ++DA+GR WQC TIQ+DF++PQR Y+D N EK+ P+M+HRA++GSLERF G+LIEHYAG+ PLWL+P+Q V+ +++ Q +YC EV L+ NGIRA++ E++ IR ++P + ++G E + + +T+R G +LG M VDDF Sbjct: 457 GAFYGPKIEFHLKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQVAVMGISNNQDDYCKEVFTMLEKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDF 622
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_MARAV (Threonyl-tRNA synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=thrS PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 8.791e-46 Identity = 89/177 (50.28%), Postives = 115/177 (64.97%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GAFYGPKI+ ++D LGR WQC TIQVDF++P R YV NSE+K P+M+HRAVLGS ERF G+LIE Y G FP WL+P Q VL +TD Q +YC + KKL ++G R E++ IR K+P + VVG KE++ V VR+R G +LGTM VDDF + + E + Sbjct: 458 GAFYGPKIEFSLKDCLGRVWQCGTIQVDFSMPGRLGAQYVADNSERKTPVMLHRAVLGSFERFIGILIEEYEGAFPTWLAPTQVAVLNITDKQRDYCQNLAKKLDSSGYRVNADLRNEKIGFKIREHTLNKVPYLVVVGDKEIENNAVAVRTRKGEDLGTMSVDDFEKLLAADVERK 634 The following BLAST results are available for this feature:
BLAST of EH406265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406265 ID=EH406265; Name=EH406265; organism=Citrus clementina; type=EST; length=737bpback to top |