EH406265

Overview
NameEH406265
Unique NameEH406265
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SULSO (Threonyl-tRNA synthetase OS=Sulfolobus solfataricus GN=thrS PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.500e-45
Identity = 90/187 (48.13%), Postives = 125/187 (66.84%), Query Frame = 3 
Query:    6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRTTM*SSLKFL 563
            GAFYGPKID +I D+LGR WQ STIQVDFNLP+RF + Y+D +  KKRP+M+HRA+ GS++RF  +L+EH+ G  P WLS +Q RVLP+TD   EY  +V+  ++   IRAEI + GE L K I+NA  Q +P + +VG KE    TVTVR+R   E+  +K + F+  + +    R    +++K L
Sbjct:  358 GAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYAEKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEKFLELLITEIAQRDVEQTTVKAL 544
[Close]
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SULIY (Threonyl-tRNA synthetase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=thrS PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.500e-45
Identity = 90/187 (48.13%), Postives = 125/187 (66.84%), Query Frame = 3 
Query:    6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRTTM*SSLKFL 563
            GAFYGPKID +I D+LGR WQ STIQVDFNLP+RF + Y+D +  KKRP+M+HRA+ GS++RF  +L+EH+ G  P WLS +Q RVLP+TD   EY  +V+  ++   IRAEI + GE L K I+NA  Q +P + +VG KE    TVTVR+R   E+  +K + F+  + +    R    +++K L
Sbjct:  358 GAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYAEKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEKFLELLITEIAQRDVEQTTVKAL 544
[Close]
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SULIN (Threonyl-tRNA synthetase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=thrS PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.500e-45
Identity = 90/187 (48.13%), Postives = 125/187 (66.84%), Query Frame = 3 
Query:    6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRTTM*SSLKFL 563
            GAFYGPKID +I D+LGR WQ STIQVDFNLP+RF + Y+D +  KKRP+M+HRA+ GS++RF  +L+EH+ G  P WLS +Q RVLP+TD   EY  +V+  ++   IRAEI + GE L K I+NA  Q +P + +VG KE    TVTVR+R   E+  +K + F+  + +    R    +++K L
Sbjct:  358 GAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYAEKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEKFLELLITEIAQRDVEQTTVKAL 544
[Close]
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SULIL (Threonyl-tRNA synthetase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=thrS PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.500e-45
Identity = 90/187 (48.13%), Postives = 125/187 (66.84%), Query Frame = 3 
Query:    6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRTTM*SSLKFL 563
            GAFYGPKID +I D+LGR WQ STIQVDFNLP+RF + Y+D +  KKRP+M+HRA+ GS++RF  +L+EH+ G  P WLS +Q RVLP+TD   EY  +V+  ++   IRAEI + GE L K I+NA  Q +P + +VG KE    TVTVR+R   E+  +K + F+  + +    R    +++K L
Sbjct:  358 GAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYAEKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEKFLELLITEIAQRDVEQTTVKAL 544
[Close]
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SULIK (Threonyl-tRNA synthetase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=thrS PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.500e-45
Identity = 90/187 (48.13%), Postives = 125/187 (66.84%), Query Frame = 3 
Query:    6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRTTM*SSLKFL 563
            GAFYGPKID +I D+LGR WQ STIQVDFNLP+RF + Y+D +  KKRP+M+HRA+ GS++RF  +L+EH+ G  P WLS +Q RVLP+TD   EY  +V+  ++   IRAEI + GE L K I+NA  Q +P + +VG KE    TVTVR+R   E+  +K + F+  + +    R    +++K L
Sbjct:  358 GAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYAEKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEKFLELLITEIAQRDVEQTTVKAL 544
[Close]
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SULIA (Threonyl-tRNA synthetase OS=Sulfolobus islandicus (strain M.16.27) GN=thrS PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.500e-45
Identity = 90/187 (48.13%), Postives = 125/187 (66.84%), Query Frame = 3 
Query:    6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRTTM*SSLKFL 563
            GAFYGPKID +I D+LGR WQ STIQVDFNLP+RF + Y+D +  KKRP+M+HRA+ GS++RF  +L+EH+ G  P WLS +Q RVLP+TD   EY  +V+  ++   IRAEI + GE L K I+NA  Q +P + +VG KE    TVTVR+R   E+  +K + F+  + +    R    +++K L
Sbjct:  358 GAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYAEKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEKFLELLITEIAQRDVEQTTVKAL 544
[Close]
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_VIBVY (Threonyl-tRNA synthetase OS=Vibrio vulnificus (strain YJ016) GN=thrS PE=3 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.958e-45
Identity = 88/177 (49.72%), Postives = 120/177 (67.80%), Query Frame = 3 
Query:    6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533
            GAFYGPKI+  + D LGR WQC T+Q+DFNLP R    YV  N+E+  P+MIHRA+LGSLERF G+LIE YAG FP WL+P QA ++ +TD Q +Y  E+ +KL+  GIRA+     E++   IR    +++P M V G +E++A  + VR+R G +LG  KVDDF+S I+    +R
Sbjct:  460 GAFYGPKIEFTLFDCLGRAWQCGTVQLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVIMNITDKQADYVQEIAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGNDLGKFKVDDFVSYIQDQIASR 636
[Close]
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_VIBVU (Threonyl-tRNA synthetase OS=Vibrio vulnificus GN=thrS PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.958e-45
Identity = 88/177 (49.72%), Postives = 120/177 (67.80%), Query Frame = 3 
Query:    6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533
            GAFYGPKI+  + D LGR WQC T+Q+DFNLP R    YV  N+E+  P+MIHRA+LGSLERF G+LIE YAG FP WL+P QA ++ +TD Q +Y  E+ +KL+  GIRA+     E++   IR    +++P M V G +E++A  + VR+R G +LG  KVDDF+S I+    +R
Sbjct:  460 GAFYGPKIEFTLFDCLGRAWQCGTVQLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVIMNITDKQADYVQEIAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGNDLGKFKVDDFVSYIQDQIASR 636
[Close]
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SULIM (Threonyl-tRNA synthetase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=thrS PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.958e-45
Identity = 90/187 (48.13%), Postives = 125/187 (66.84%), Query Frame = 3 
Query:    6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRTTM*SSLKFL 563
            GAFYGPKID +I D+LGR WQ STIQVDFNLP+RF + Y+D +  KKRP+M+HRA+ GS++RF  +L+EH+ G  P WLS +Q RVLP+TD   EY  +V+  ++   IRAEI + GE L K I+NA  Q +P + +VG KE    TVTVR+R   E+  +K + F+  + +    R    +++K L
Sbjct:  358 GAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYAEKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEKFLELLITEIGQRDVEQTTVKAL 544
[Close]
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_CAMJR (Threonyl-tRNA synthetase OS=Campylobacter jejuni (strain RM1221) GN=thrS PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.558e-45
Identity = 87/172 (50.58%), Postives = 120/172 (69.77%), Query Frame = 3 
Query:    3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIK 515
            GGAFYGPKID+KI DAL RKWQC TIQVDFNLP RF + Y DS++EKK+P+M+HRA+LGS ERF G+L EH AG+FP +++P    ++P+ +  + Y  E+ K+L    I +E+    E L K IR AEKQK+P++ V+G  EV  ++V +R R   E   + +D+FI  +K
Sbjct:  423 GGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQKNLSLDEFIKLVK 594
The following BLAST results are available for this feature:
BLAST of EH406265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SYT_SULSO1.500e-4548.13Threonyl-tRNA synthetase OS=Sulfolobus solfataricu... [more]
SYT_SULIY1.500e-4548.13Threonyl-tRNA synthetase OS=Sulfolobus islandicus ... [more]
SYT_SULIN1.500e-4548.13Threonyl-tRNA synthetase OS=Sulfolobus islandicus ... [more]
SYT_SULIL1.500e-4548.13Threonyl-tRNA synthetase OS=Sulfolobus islandicus ... [more]
SYT_SULIK1.500e-4548.13Threonyl-tRNA synthetase OS=Sulfolobus islandicus ... [more]
SYT_SULIA1.500e-4548.13Threonyl-tRNA synthetase OS=Sulfolobus islandicus ... [more]
SYT_VIBVY1.958e-4549.72Threonyl-tRNA synthetase OS=Vibrio vulnificus (str... [more]
SYT_VIBVU1.958e-4549.72Threonyl-tRNA synthetase OS=Vibrio vulnificus GN=t... [more]
SYT_SULIM1.958e-4548.13Threonyl-tRNA synthetase OS=Sulfolobus islandicus ... [more]
SYT_CAMJR2.558e-4550.58Threonyl-tRNA synthetase OS=Campylobacter jejuni (... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2BG09ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406265 ID=EH406265; Name=EH406265; organism=Citrus clementina; type=EST; length=737bp
GTGGTGGTGCGTTTTATGGTCCAAAGATTGATCTTAAGATTGAGGATGCT
CTTGGAAGGAAGTGGCAGTGCTCAACCATACAGGTTGATTTCAATTTACC
ACAGCGATTTGACATTGTGTATGTTGACTCAAACTCAGAAAAGAAGCGTC
CCATCATGATCCACAGAGCAGTGCTTGGATCCTTGGAACGTTTCTTTGGA
GTTCTAATAGAGCATTATGCTGGGGATTTTCCTTTGTGGCTTTCTCCAAT
CCAAGCTCGTGTTTTACCAGTTACAGACACACAGCTTGAGTACTGTAATG
AGGTGATAAAAAAACTGAAAACTAATGGTATACGAGCTGAAATTTGCCAT
GGTGAGCGCCTGCCTAAGCTCATTAGAAATGCAGAGAAACAGAAAATTCC
ATTAATGGCAGTCGTTGGAGCTAAGGAAGTTGATGCACAAACTGTTACAG
TCAGATCTAGGTTTGGTGGAGAGCTTGGGACCATGAAAGTTGATGATTTT
ATCAGCAGAATCAAGTCTGCCACTGAAAACAGAACTACAATGTAAAGTTC
TTTGAAATTCTTAGACATGATATTTTTACAGGGATTTGAATACATACGAT
TTTCATTAGATAGCGACATTTTTTTACTCGTAAATTTATCTACTTGAGAA
ACTAAATATTTCTAATTTATGGTTGTAGCCTGTGTACAATAATTTTAGTT
TCTATTTTTCCTAATAAGCAAATAAATATCTGTTTAT
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