EH406265
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_CAMJE (Threonyl-tRNA synthetase OS=Campylobacter jejuni GN=thrS PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.558e-45 Identity = 87/172 (50.58%), Postives = 120/172 (69.77%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIK 515 GGAFYGPKID+KI DAL RKWQC TIQVDFNLP RF + Y DS++EKK+P+M+HRA+LGS ERF G+L EH AG+FP +++P ++P+ + + Y E+ K+L I +E+ E L K IR AEKQK+P++ V+G EV ++V +R R E + +D+FI +K Sbjct: 423 GGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQKNLSLDEFIKLVK 594
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_CAMJD (Threonyl-tRNA synthetase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=thrS PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.558e-45 Identity = 87/172 (50.58%), Postives = 120/172 (69.77%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIK 515 GGAFYGPKID+KI DAL RKWQC TIQVDFNLP RF + Y DS++EKK+P+M+HRA+LGS ERF G+L EH AG+FP +++P ++P+ + + Y E+ K+L I +E+ E L K IR AEKQK+P++ V+G EV ++V +R R E + +D+FI +K Sbjct: 423 GGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQKNLSLDEFIKLVK 594
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_ARTCA (Threonyl-tRNA synthetase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=thrS PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.558e-45 Identity = 88/180 (48.89%), Postives = 122/180 (67.78%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRTT 539 G AFYGPKI ++ +DALGR WQ STIQ+DFNLP+RF++ + ++ ++RP+MIHRA+ GS+ERF GVL EHYAG FP WL+P+Q +PV +T EY +V+ +LK GIRAE+ +R PK IR A K KIP + + G + +A V+ R R G + + V + + RI A NRT+ Sbjct: 490 GAAFYGPKISVQAKDALGRTWQMSTIQLDFNLPERFELEFQAADGSRQRPVMIHRALFGSVERFMGVLTEHYAGAFPAWLAPVQVVGIPVAETFNEYMFDVVDQLKAAGIRAEVDTSSDRFPKKIRTASKDKIPFVLIAGGDDAEAGAVSFRFRDGSQDNGVPVAEAVKRITEAVRNRTS 669
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_DESAH (Threonyl-tRNA synthetase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=thrS PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.363e-45 Identity = 85/167 (50.90%), Postives = 120/167 (71.86%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFI 503 GAFYGPKID+ I+DALGR WQC T+Q+D LP+RFD+ Y +++EK RPIMIHR + GS+ERFFG+L+EH+AG FPLWL+P+QA VLP+ D ++ V K+L++NGIR ++ E L K IR A+ +PL+ +G KE ++ T++VR+ G + + DFI Sbjct: 453 GAFYGPKIDIHIKDALGRTWQCGTVQLDMALPERFDLTYKGADNEKHRPIMIHRVIYGSIERFFGILVEHFAGKFPLWLAPVQAVVLPINDDLADHAQTVKKELESNGIRCDVDLRTESLKKKIREAQVNYVPLIITIGEKEKESGTLSVRTLDGKVRMGLSMADFI 619
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_CAMJJ (Threonyl-tRNA synthetase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=thrS PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.363e-45 Identity = 86/172 (50.00%), Postives = 120/172 (69.77%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIK 515 GGAFYGPKID+KI DAL RKWQC T+QVDFNLP RF + Y DS++EKK+P+M+HRA+LGS ERF G+L EH AG+FP +++P ++P+ + + Y E+ K+L I +E+ E L K IR AEKQK+P++ V+G EV ++V +R R E + +D+FI +K Sbjct: 423 GGAFYGPKIDIKITDALKRKWQCGTVQVDFNLPSRFKLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVVKRSVALRDRRAKEQKNLSLDEFIKLVK 594
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_SULTO (Threonyl-tRNA synthetase OS=Sulfolobus tokodaii GN=thrS PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.698e-45 Identity = 87/177 (49.15%), Postives = 116/177 (65.54%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 GAFYGPKID I D+LGR WQ STIQVDFNLP+RF + Y+D + +KRP+MIHRA+ GS+ERF +L+EH+ G P WLSP+Q R+LP++ +Y ++ KLK N IR E+ E L K I+ A + +P M +VG KE + VTVR R E+ +K DDF+ + NR Sbjct: 353 GAFYGPKIDFDIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGSRKRPVMIHRAIYGSIERFMAILLEHFRGKLPTWLSPVQVRILPISKDVEDYALNLLSKLKENKIRVELDMSDETLSKRIKKAYDEGVPYMIIVGKKEREEGKVTVRGRNNVEIRGVKFDDFLKALLEEIRNR 529
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_LARHH (Threonyl-tRNA synthetase OS=Laribacter hongkongensis (strain HLHK9) GN=thrS PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.698e-45 Identity = 86/172 (50.00%), Postives = 114/172 (66.28%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKS 518 GAFYGPKI+ ++D LGR WQC T+Q+DFNLP R YV ++ KK P+M+HRA+LGSLERF G+LIEH+AG PLWL+P+Q VL +T+ Q EY EV + LK G R ++ E++ IR QK+P +VG KE V VR+R G +LG + + FI R+KS Sbjct: 458 GAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPVRLGAEYVSEDNAKKHPVMLHRAILGSLERFIGILIEHHAGAMPLWLAPVQMAVLNITEAQAEYATEVAETLKKQGFRVDLDLRNEKISYKIREHSLQKLPYQIIVGDKEKAGALVAVRARTGEDLGQIPLSQFIERLKS 629
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_DESVM (Threonyl-tRNA synthetase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=thrS PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.698e-45 Identity = 89/172 (51.74%), Postives = 118/172 (68.60%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKS 518 GAFYGPKID+K+ DA+GR+WQ STIQVDF LP RFD+VY+ + E+ RP+M+HRA+LGSLERF GVL EH+AG FP W+ P+QAR+L VTD Q ++ +L G+R E E+L +R A+ +KIP + VVG KEV+A V VR R G LG + + I++ Sbjct: 457 GAFYGPKIDIKVTDAIGREWQLSTIQVDFTLPDRFDLVYIGQDGERHRPVMVHRAILGSLERFIGVLTEHFAGAFPTWIVPVQARLLTVTDAQNDFAMGARDQLVAAGLRVEADTRNEKLGYKVREAQLEKIPYILVVGDKEVEAGGVNVRLRNGENLGLKTLAEVAEMIRA 628
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_STRGG (Threonyl-tRNA synthetase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=thrS PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.442e-45 Identity = 82/178 (46.07%), Postives = 121/178 (67.98%), Query Frame = 3 Query: 3 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 533 G AFYGPKI ++ +DA+GR WQ ST+Q+DFNLP+RFD+ Y + K+RP+MIHRA+ GS+ERFF VL+EHYAG FP+WL+P+QA +P+ D + Y E K + G+R ++ +R+ K IRN +K K+P M + G +++ V+ R R G + + VD+ I++I A E+R Sbjct: 478 GAAFYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGSKQRPVMIHRALFGSIERFFAVLLEHYAGAFPVWLAPVQAVGIPIGDAHIPYLQEFAAKARKQGLRVDVDASSDRMQKKIRNQQKNKVPFMIIAGDEDMANGAVSFRYRDGSQENGIPVDEAIAKIAKAVEDR 655
BLAST of EH406265 vs. ExPASy Swiss-Prot
Match: SYT_METFK (Threonyl-tRNA synthetase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=thrS PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.442e-45 Identity = 82/172 (47.67%), Postives = 120/172 (69.77%), Query Frame = 3 Query: 6 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKS 518 GAFYGPKI+ ++D+LGR WQC TIQ+DFNLP+R YVD ++ +K P+M+HRA++GS+ERF G+LIE+YAG P WL+P+QA VL ++D Q +Y + V+ +L+ NG R + E++ IR QK+P + + G +E+ V VR+R G +LG+M + FI R+KS Sbjct: 458 GAFYGPKIEFTLKDSLGRLWQCGTIQLDFNLPERLGAEYVDEDNSRKHPVMLHRAIVGSMERFLGILIENYAGAMPAWLAPVQAMVLNISDGQADYVSSVVAELRKNGFRVDSDLRNEKITYKIREHSLQKLPYLLIAGEREMQTGQVAVRTRKGEDLGSMPLSAFIERLKS 629 The following BLAST results are available for this feature:
BLAST of EH406265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406265 ID=EH406265; Name=EH406265; organism=Citrus clementina; type=EST; length=737bpback to top |