FC868536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15 Identity = 64/222 (28.83%), Postives = 104/222 (46.85%), Query Frame = 1 Query: 34 NTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHI-PGPEGVRGRNSDNTLIKEKLGWAPSMKXKDGLR--ITYF 678 NT+ + NML ++ G R AS++ +Y + V + D W P P+ Y K +E +C Y K G+E RV R N +GP GR + F +AL + ++G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW P + ++GL I YF Sbjct: 179 NTIGTLNMLGLAKRVGA-RLLLASTSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 391
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15 Identity = 64/222 (28.83%), Postives = 104/222 (46.85%), Query Frame = 1 Query: 34 NTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHI-PGPEGVRGRNSDNTLIKEKLGWAPSMKXKDGLR--ITYF 678 NT+ + NML ++ G R AS++ +Y + V + D W P P+ Y K +E +C Y K G+E RV R N +GP GR + F +AL + ++G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW P + ++GL I YF Sbjct: 179 NTIGTLNMLGLAKRVGA-RLLLASTSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 391
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: Y4AF_RHISN (Uncharacterized protein y4aF OS=Rhizobium sp. (strain NGR234) GN=NGR_a00420 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.176e-15 Identity = 66/225 (29.33%), Postives = 102/225 (45.33%), Query Frame = 1 Query: 25 MYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP-QDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDK----FEMWGDGLQTRSFTFIDECVEGVLRLTKS-DFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPI-HHIPGPEGV-RGRNSDNTLIKEKLGWAPSMKXKDGLRITY 675 +Y N ++ N++E S SGV++ + S+CIYP K + + P EP + Y + K+A +LC+ Y K +G N+YGP + A RKA + K +WG G TR F + ++C + ++ L K E +NIGS +S+ E+A IV K I P+G R S L+ +GW P + GL +Y Sbjct: 84 IYQNLIMEANVIEGSFRSGVEKLLFLGSSCIYP--KYAAQPIREEALLTGPLEPTNEWYAIAKIAGIKLCQAYRKQYGANFISAMPTNLYGPRDKFDLNSSHVVPALIRKAHEAKIKDLGCLSIWGSGTPTRDFLYSEDCSDALVFLLKHYSETEHINIGSGGEISIIELAHIVCRVVGFKGDIVFDTSKPDGTPRKLLSSERLV--SMGWRPKTSLELGLAKSY 304
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: FCL2_ARATH (Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana GN=GER2 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15 Identity = 61/225 (27.11%), Postives = 102/225 (45.33%), Query Frame = 1 Query: 34 NTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP-QDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRK----ALTSTDKFEMWGDGLQTRSFTFIDECVEG-VLRLTKSDFREPVNIGSDEMVSMNEMAEI---VLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKXKDGLRITYFW 681 N I N++ ++ GVK+ + S+CIYP+F S + P EP + Y + K+A ++C+ Y + G N+YG + A R+ + D+ +WG G R F +D+ + V + + E VN+GS V++ E+AE+ V+ F+ K + P+G + D++ + LGW P + KDGL TY W Sbjct: 99 NLQIQTNVIHSAYTHGVKKLLFLGSSCIYPKFAPQPIPESALLTG--PLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTNLYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLMDQYSGFEHVNVGSGVEVTIKELAELVKEVVGFKGKL--VWDTTKPDGTPRKLMDSSKL-ASLGWTPKISLKDGLSQTYEW 318
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: FCL1_ORYSJ (Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica GN=Os06g0652400 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.240e-15 Identity = 62/228 (27.19%), Postives = 109/228 (47.81%), Query Frame = 1 Query: 34 NTMISFNMLEAS-RISGVKRFFYASSACIYPEF--KQLETNVSLKESDAWPAEPQDA-YGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRK----ALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS-DFREPVNIGSDEMVSMNEMAEIV---LSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKXKDGLRITYFW 681 N I N+++A+ + V++ + S+CIYP+F + + N L + P EP + Y + K+A ++C+ Y G + N+YGP + A R+ ++ + +WG G R F +D+ + V+ L E VN+GS V++ E+AE+V + F+ K + P+G + D++ I+E +GW P + K+GL TY W Sbjct: 98 NLQIQTNVVDAALKCGSVRKLLFLGSSCIYPKFAPQPIPENSLL----SGPLEPTNEWYAVAKIAGIKMCQAYRIQHGFDAISAMPTNLYGPQDNFHPENSHVLPALIRRFHEAKASNAAEVVVWGTGSPLREFLHVDDLADAVIFLMDHYSGLEHVNVGSGSEVTIKELAELVKEVVGFQGKL--VWDSSKPDGTPRKLMDSSKIQE-MGWKPKVPLKEGLVETYKW 318
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 60/218 (27.52%), Postives = 101/218 (46.33%), Query Frame = 1 Query: 34 NTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHI-PGPEGVRGRNSDNTLIKEKLGWAPSMKXKDGLRIT 672 NT+ + NML ++ G R AS++ +Y + V + + W P P+ Y K +E +C Y K G+E RV R N +GP GR + F +AL ++ ++G G QTR+F ++ + V G++ L S+ PVN+G+ + S+ + A ++ I + + + R D K LGW P + ++GL T Sbjct: 180 NTIGTLNMLGLAKRVGA-RLLLASTSEVYGD-----PEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGR--VVSNFILQALQG-EQLTVYGSGEQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDDPQRRKPDIRKAKLLLGWEPVVPLEEGLNKT 388
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: GALE_METJA (Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii GN=MJ0211 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13 Identity = 62/221 (28.05%), Postives = 102/221 (46.15%), Query Frame = 1 Query: 34 NTMISFNMLEASRISGVKRFFYASSA-CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIV---LSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKXKDGLRITYFWI 684 N + + N+LE R + + +ASS +Y E L + + P P YGL K EE K Y + +GIE + R+ N+YG K G + F K L + ++GDG QTR F ++ + + L + + E VNIG+ + S+NE+ +I+ + F + + + EG R + E LGW P + K+G++ W+ Sbjct: 91 NVLGTINILEMMRKYDIDKIVFASSGGAVYGEPNYLPVD------ENHPINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNVYGERQDPK-GEAGVISIFIDKMLKNQSPI-IFGDGNQTRDFVYVGDVAKANL-MALNWKNEIVNIGTGKETSVNELFDIIKHEIGFRGEAI---YDKPREGEVYRIYLDIKKAESLGWKPEIDLKEGIKRVVNWM 299
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: FCL_ECOLI (GDP-L-fucose synthetase OS=Escherichia coli (strain K12) GN=fcl PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12 Identity = 57/235 (24.26%), Postives = 100/235 (42.55%), Query Frame = 1 Query: 25 MYNNTMISFNMLEASRISGVKRFFYASSACIYPEF-KQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDK----FEMWGDGLQTRSFTFIDECVEG---VLRLTKSDFRE-------PVNIGSDEMVSMNEMAEIVLSFED-KKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKXKDGLRITYFW 681 +Y N MI N++ A+ + V + + S+CIYP+ KQ L + P + Y + K+A +LC+ Y + +G + R N+YGP + A R+ +T + +WG G R F +D+ V+ L + E +N+G+ ++ E+A+ + K + P+G + D T + +LGW + + GL TY W Sbjct: 80 IYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPT--NEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRL-HQLGWYHEISLEAGLASTYQW 311
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12 Identity = 56/219 (25.57%), Postives = 105/219 (47.95%), Query Frame = 1 Query: 31 NNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF-REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-VRGRNSDNTLIKEKLGWAPSMKXKDGLRITYFW 681 +N M + N+ E +R +++ YASS+ +Y +++ + D +P Y K ++E + Y +GI+ RF +YG +G + A F + L + E++ G R FT+I + V+G+LR K DF E N+G+ + V + E++ + +KK +P +G V +D + ++ LG+ P + ++GL+ W Sbjct: 107 SNEMGTLNIFEFARRFDIEKVVYASSSSVYGGNRKIPFS-----EDDRVDKPISLYASTKRSNELMAHVYHHLYGIKMIGLRFFTVYGEYGR----PDMAYFKFAKNILLGKE-IEVYNYGNMERDFTYISDVVDGILRAIKKDFDYEIFNLGNSKPVKLMYFIELIEKYLNKKAKKKFLPMQDGDVLRTYADLSKSEKLLGYKPKVTIEEGLKRFCNW 315 The following BLAST results are available for this feature:
BLAST of FC868536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868536 ID=FC868536; Name=FC868536; organism=Citrus clementina; type=EST; length=686bpback to top |