FC868536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: GME1_ORYSJ (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica GN=GME-1 PE=1 SV=1) HSP 1 Score: 459.529 bits (1181), Expect = 7.317e-129 Identity = 217/228 (95.18%), Postives = 225/228 (98.68%), Query Frame = 1 Query: 1 IQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKXKDGLRITYFWI 684 IQSNHSVIMYNNTMISFNMLEA+RI+GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA+EELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKA TSTD+FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEI+LSFED++LPIHHIPGPEGVRGRNSDNTLIKEKLGWAP+MK KDGLR TYFWI Sbjct: 110 IQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWI 337
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: GME1_ORYSI (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. indica GN=OsI_032456 PE=2 SV=1) HSP 1 Score: 459.529 bits (1181), Expect = 7.317e-129 Identity = 217/228 (95.18%), Postives = 225/228 (98.68%), Query Frame = 1 Query: 1 IQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKXKDGLRITYFWI 684 IQSNHSVIMYNNTMISFNMLEA+RI+GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA+EELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKA TSTD+FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEI+LSFED++LPIHHIPGPEGVRGRNSDNTLIKEKLGWAP+MK KDGLR TYFWI Sbjct: 110 IQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWI 337
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: GME2_ORYSJ (GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp. japonica GN=GME-2 PE=2 SV=2) HSP 1 Score: 457.218 bits (1175), Expect = 3.631e-128 Identity = 217/228 (95.18%), Postives = 226/228 (99.12%), Query Frame = 1 Query: 1 IQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKXKDGLRITYFWI 684 IQSNHSVIMYNNTMISFNMLEA+RI+GVKRFFYASSACIYPEFKQL+T VSLKESDAWPAEPQDAYGLEKLA+EELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTD+FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFE+K+LPIHHIPGPEGVRGRNSDNTLIKEKLGWAP+M+ KDGLRITYFWI Sbjct: 103 IQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLDTVVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWI 330
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: GME_ARATH (GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana GN=At5g28840 PE=1 SV=1) HSP 1 Score: 448.743 bits (1153), Expect = 1.292e-125 Identity = 212/229 (92.58%), Postives = 224/229 (97.82%), Query Frame = 1 Query: 1 IQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLET-NVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKXKDGLRITYFWI 684 IQSNHSVIMYNNTMISFNM+EA+RI+G+KRFFYASSACIYPEFKQLET NVSLKESDAWPAEPQDAYGLEKLA+EELCKHY KDFGIECR+GRFHNIYGPFGTWKGGREKAPAAFCRKA TSTD+FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAE+VLSFE+KKLPIHHIPGPEGVRGRNSDN LIKEKLGWAP+M+ K+GLRITYFWI Sbjct: 108 IQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWI 336
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: YTCB_BACSU (Uncharacterized UDP-glucose epimerase ytcB OS=Bacillus subtilis GN=ytcB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 63/209 (30.14%), Postives = 100/209 (47.85%), Query Frame = 1 Query: 55 MLEASRISGVKRFFYASSACIYPEFK-QLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCR--KALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRN-SDNTLIKEKLGWAPSMKXKDGL 663 +LEA R ++ F +AS++ +Y E + ++ N SL P YG+ KL E+LC Y + FGI + RF +YGP R++ AF R K ++GDG Q+R FT+I +CV+G+ + E VNIG E S+ ++ ++ +K +H G +D + K+ L + P+ KDGL Sbjct: 109 LLEACREHSIQTFVFASTSSVYGEKQGKVSENTSLS--------PLSPYGVTKLTGEKLCHVYKQSFGIPIVILRFFTVYGP-------RQRPDMAFHRLIKQHLQQKPLTIFGDGQQSRDFTYISDCVKGITAVLGKPHLIGETVNIGGAERASVLKVVSLIEDISGRKATLHFSDKIAGEPSNTWADISKAKQLLHYDPATSLKDGL 302
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: FCL1_ARATH (GDP-L-fucose synthase 1 OS=Arabidopsis thaliana GN=GER1 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16 Identity = 63/230 (27.39%), Postives = 104/230 (45.22%), Query Frame = 1 Query: 34 NTMISFNMLEASRISGVKRFFYASSACIYPEF------KQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRK----ALTSTDKFEMWGDGLQTRSFTFIDECVEG-VLRLTKSDFREPVNIGSDEMVSMNEMAEI---VLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKXKDGLRITYFW 681 N I N++ ++ GVK+ + S+CIYP+F + SL+ ++ W Y + K+A + C+ Y G + G N+YGP + A R+ + ++ +WG G R F +D+ + V L + E VNIGS + V++ E+AE+ V+ FE K P+G + D++ + LGW P + +DGL TY W Sbjct: 85 NLQIQTNVIHSAYEHGVKKLLFLGSSCIYPKFAPQPIPESALLTASLEPTNEW-------YAIAKIAGIKTCQAYRIQHGWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLDRYSGLEHVNIGSGQEVTIRELAELVKEVVGFEGKL--GWDCTKPDGTPRKLMDSSKL-ASLGWTPKVSLRDGLSQTYDW 304
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: UXS1_DANRE (UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.751e-16 Identity = 65/222 (29.28%), Postives = 105/222 (47.30%), Query Frame = 1 Query: 34 NTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGWAPSMKXKDGLR--ITYF 678 NT+ + NML ++ G R AS++ +Y + V + D W P P+ Y K +E +C Y K G+E RV R N +G GR + F +AL + ++G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ S + I +P + + R D K LGW P + ++GL I YF Sbjct: 177 NTIGTLNMLGLAKRVGA-RLLLASTSEVYGD-----PEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHMNDGR--VVSNFILQALQG-EALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLGWEPVVPLEEGLNKTIQYF 389
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: FCL2_ORYSJ (Putative GDP-L-fucose synthase 2 OS=Oryza sativa subsp. japonica GN=Os06g0652300 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16 Identity = 64/221 (28.96%), Postives = 106/221 (47.96%), Query Frame = 1 Query: 34 NTMISFNMLEASRISG-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAA----FCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL-TKSDFREPVNIGSDEMVSMNEMAEIVLSFED-KKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKXKDGLRITY 675 N I+ N+++A+R G V++ +S+ IYP T S + PAE + Y + K+A ++C+ ++G++ +N+YGP + A F R L + +WG G R FT +D+ E V+ L + E VN+GS E V++ E+AE V + + PEGV R D+ ++ KLGW P + +DG++ Y Sbjct: 114 NLRITVNVVDAARRCGSVRKLLVLASSTIYPADAPQPTPESALLTGP-PAEGSEWYAIPKIAGIKMCQAVRAEYGLDAIAAAPNNLYGPRHPFPPEHSHVIPALIRRFHRAKLEGAGEVAVWGSGAAAREFTHVDDLAEAVVVLMERYSGEEHVNVGSGEEVTVRELAEAVRGVVGYEGVVAWDAARPEGVARRVVDSGRMR-KLGWEPRVALRDGIQDLY 332
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15 Identity = 64/222 (28.83%), Postives = 104/222 (46.85%), Query Frame = 1 Query: 34 NTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHI-PGPEGVRGRNSDNTLIKEKLGWAPSMKXKDGLR--ITYF 678 NT+ + NML ++ G R AS++ +Y + V + D W P P+ Y K +E +C Y K G+E RV R N +GP GR + F +AL + ++G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW P + ++GL I YF Sbjct: 179 NTIGTLNMLGLAKRVGA-RLLLASTSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 391
BLAST of FC868536 vs. ExPASy Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15 Identity = 64/222 (28.83%), Postives = 104/222 (46.85%), Query Frame = 1 Query: 34 NTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHI-PGPEGVRGRNSDNTLIKEKLGWAPSMKXKDGLR--ITYF 678 NT+ + NML ++ G R AS++ +Y + V + D W P P+ Y K +E +C Y K G+E RV R N +GP GR + F +AL + ++G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW P + ++GL I YF Sbjct: 179 NTIGTLNMLGLAKRVGA-RLLLASTSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGR--VVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 391 The following BLAST results are available for this feature:
BLAST of FC868536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868536 ID=FC868536; Name=FC868536; organism=Citrus clementina; type=EST; length=686bpback to top |