FC868889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 3.008e-36 Identity = 80/175 (45.71%), Postives = 103/175 (58.86%), Query Frame = 1 Query: 97 NGFA-WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERI------KELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANNS 600 N FA W V+ +CE F W+L KW P++ TY RL R +L +DIFV+T DP EPP++T NTVLS+LAVDYP +++CYVSDDG + L+F SL E S+FA+ WVPFCKKY+I RAP YF + D F +D MK EYE I A + + Sbjct: 283 NAFALWLVSVICEIWFALSWILDQFPKWFPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLAETSEFARKWVPFCKKYSIEPRAPEWYFAAKIDYLKDKVQTSFVKDRRAMKREYEEFKIRINALVSKA 457
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.008e-36 Identity = 76/165 (46.06%), Postives = 100/165 (60.61%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERI------KELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEA 585 W ++ +CE F W+L KW+PI+ TY RL R +L P+DIFV+T DP EPP++T NTVLS+LAVDYP +++CYVSDDG + L F +L E S+FA+ WVPFCKKY+I RAP YF ++ D F +D MK EYE + A Sbjct: 298 WLLSVICEIWFALSWILDQFPKWSPINRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVQASFVKDRRAMKREYEEFKVRVNA 462
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.008e-36 Identity = 76/165 (46.06%), Postives = 100/165 (60.61%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERI------KELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEA 585 W ++ +CE F W+L KW+PI+ TY RL R +L P+DIFV+T DP EPP++T NTVLS+LAVDYP +++CYVSDDG + L F +L E S+FA+ WVPFCKKY+I RAP YF ++ D F +D MK EYE + A Sbjct: 298 WLLSVICEIWFALSWILDQFPKWSPINRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVQASFVKDRRAMKREYEEFKVRVNA 462
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.752e-36 Identity = 77/165 (46.67%), Postives = 99/165 (60.00%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERI------KELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEA 585 W + +CE F F W+L KW PI+ TY RL R +L P+D+FV+T DP EPP++T NTVLS+L+VDYP ++ACYVSDDG + L F SL E ++FAK WVPFCKK+NI RAP YF ++ D F ++ MK EYE I A Sbjct: 304 WLTSVICEIWFAFSWLLDQFPKWYPINRETYLDRLAIRYDRDGEPSQLVPVDVFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVACYVSDDGSAMLTFESLSETAEFAKKWVPFCKKFNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINA 468
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.547e-35 Identity = 76/165 (46.06%), Postives = 98/165 (59.39%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERI------KELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEA 585 W ++ +CE F W+L KW PI TY RL R +L P+D FV+T DP EPP++T NTVLS+LAVDYP +++CYVSDDG + L F +L E S+FAK WVPFCKKY+I RAP YF ++ D + F ++ MK EYE I A Sbjct: 308 WLISVICEIWFAMSWILDQFPKWFPIERETYLDRLTLRFDKEGQTSQLAPIDFFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKYSIEPRAPEWYFQQKIDYLKDKVAPYFVRERRAMKREYEEFKVRINA 472
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.326e-35 Identity = 74/165 (44.85%), Postives = 98/165 (59.39%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERI------KELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEA 585 W ++ +CE F W+L KW PI TY RL R +L P+D FV+T DP EPP++T NTVLS+L+VDYP +++CYVSDDG + L F +L E S+FAK WVPFCKK+NI RAP YF ++ D + F ++ MK +YE I A Sbjct: 308 WLISVICEIWFAMSWILDQFPKWLPIERETYLDRLSLRFDKEGQPSQLAPVDFFVSTVDPSKEPPLVTANTVLSILSVDYPVEKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKFNIEPRAPEWYFQQKIDYLKDKVAASFVRERRAMKRDYEEFKVRINA 472
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.344e-35 Identity = 75/164 (45.73%), Postives = 98/164 (59.76%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKE-----LPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEA 585 W + +CE F F W+L KW PI+ TY RL R + L P+D FV+T DP EPP++T NTVLS+LAVDYP +++CYVSDDG + L F SL E ++FA+ WVPFCKKY+I RAP YF ++ D F ++ MK +YE I A Sbjct: 218 WMTSVICEIWFGFSWILDQFPKWCPINRETYVDRLIARYGDGEDSGLAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKKYSIEPRAPEFYFSQKIDYLKDKIHPSFVKERRAMKRDYEEYKVRINA 381
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 4.344e-35 Identity = 75/164 (45.73%), Postives = 98/164 (59.76%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKE-----LPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEA 585 W + +CE F F W+L KW PI+ TY RL R + L P+D FV+T DP EPP++T NTVLS+LAVDYP +++CYVSDDG + L F SL E ++FA+ WVPFCKKY+I RAP YF ++ D F ++ MK +YE I A Sbjct: 218 WMTSVICEIWFGFSWILDQFPKWCPINRETYVDRLIARYGDGEDSGLAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKKYSIEPRAPEFYFSQKIDYLKDKIHPSFVKERRAMKRDYEEYKVRINA 381
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.344e-35 Identity = 75/165 (45.45%), Postives = 99/165 (60.00%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERI------KELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEA 585 W V+ +CE F W+L KW PI+ TY RL R +L P+D+FV+T DP EPP++T NTVLS+LAVDYP +++CYVSDDG + L F +L E ++FA+ WVPFCKK+NI RAP YF ++ D F ++ MK EYE I A Sbjct: 301 WLVSVICEIWFALSWLLDQFPKWYPINRETYLDRLALRYDREGEPSQLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINA 465
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.344e-35 Identity = 75/165 (45.45%), Postives = 99/165 (60.00%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERI------KELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEA 585 W V+ +CE F W+L KW PI+ TY RL R +L P+D+FV+T DP EPP++T NTVLS+LAVDYP +++CYVSDDG + L F +L E ++FA+ WVPFCKK+NI RAP YF ++ D F ++ MK EYE I A Sbjct: 301 WLVSVICEIWFALSWLLDQFPKWYPINRETYLDRLALRYDREGEPSQLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINA 465 The following BLAST results are available for this feature:
BLAST of FC868889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868889 ID=FC868889; Name=FC868889; organism=Citrus clementina; type=EST; length=659bpback to top |