FC868889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 5.261e-65 Identity = 118/221 (53.39%), Postives = 145/221 (65.61%), Query Frame = 1 Query: 7 CQKTTH-----RFLDVTIXXXXXXXXXXXXXXXKHNGFAWFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANNSTSFDLTGELEVFFTQCQN 654 C++ +H R +D+TI W VAFLCE+CFTFVW+L T KW+P Y TYP+RL ER+ ELPP+D+FVTTADP EPP++ VNTVLSLLAV+YPA++LACYVSDDGCSPL ++SL EASKFAK+WVPFCKKYN+RVRAPF YF + P A EF +DWE K EYE+L +E A +S D + E F N Sbjct: 12 CERISHKSYFLRAVDLTILGLLLSLLLYRILHVNQKDTVWIVAFLCETCFTFVWLLITNIKWSPADYKTYPERLDERVHELPPVDMFVTTADPVREPPLIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFMYF---RNSPEAAEGSEFSKDWEMTKREYEKLSQKVEDATGSSHWLDAEDDFEAFLNTKSN 229
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 6.431e-63 Identity = 115/204 (56.37%), Postives = 138/204 (67.65%), Query Frame = 1 Query: 25 RFLDVTIXXXXXXXXXXXXXXXKHNGFAWFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANNSTSFDLTGELEVF 636 R +D+TI NG W VAFLCESCF+FVW+L+T TKW+P YP RL ER+ +LP +D+FV TADP EPPI+ VNTVLSLLAV+YPA++LACYVSDDGCSPL ++SL EASKFAK+WVPFCKKYN++VRAPFRYFL EF +DWE K EYE+LC +E A +S ELE F Sbjct: 23 RAVDLTILGLLFSLLLHRILYMSQNGIIWLVAFLCESCFSFVWLLSTCTKWSPAETKPYPDRLDERVYDLPSVDMFVPTADPVREPPIMVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNLKVRAPFRYFLNPF---AATEGSEFSRDWEMTKREYEKLCRKVEDATGDSHLLGTDNELEAF 223
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 1.871e-62 Identity = 116/215 (53.95%), Postives = 145/215 (67.44%), Query Frame = 1 Query: 7 CQKTTH-----RFLDVTIXXXXXXXXXXXXXXXKHNGFAWFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANNSTSFDLTGELEVF 636 C+K ++ R +D+TI N W VAFLCES F+F+W+L T KW+P SY +YP+RL ER+ +LP +D+FVTTADP EPPIL NT+LSLLAV+YPA++LACYVSDDGCSPL ++SL EASKFAK+WVPFCKKYNI+VRAPFRYFL + P S EF +DWE K EYE+L +E A +S D + E F Sbjct: 12 CEKISYKNYFLRVVDLTILGFLFSLLLYRILLMNQNNSVWVVAFLCESFFSFIWLLITSIKWSPASYKSYPERLDERVHDLPSVDMFVTTADPVREPPILVANTLLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNIKVRAPFRYFL---NPPAATESSEFSKDWEITKREYEKLSRRVEDATGDSHWLDAEDDFEDF 223
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2) HSP 1 Score: 226.868 bits (577), Expect = 7.358e-59 Identity = 110/217 (50.69%), Postives = 141/217 (64.98%), Query Frame = 1 Query: 7 CQKTTH-----RFLDVTIXXXXXXXXXXXXXXXKHNGFAWFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWE--FQQDWEKMKEEYERLCGNIEAAANNSTSFDLTGELEVF 636 C++ +H R +D+TI N W VAFLCESCF+F+W++ T KW+P YP RL ER+ +LP +D+FV TADP EPPI+ VNTVLSLLAV+YPA++LACYVSDDGCSPL ++SL EASKF K+W PFCKKYN+RVRAPFRYFL P ++ + F +DW+ MK EY +LC +E A +S D + E F Sbjct: 12 CERISHKSYILRIVDLTILVLLFSLLWYRILHMCENNTIWLVAFLCESCFSFMWLIITCIKWSPAEDKPYPNRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYFLN-----PLVATDDSVFSKDWKMMKREYVKLCRKVEDATGDSHWLDADDDFEAF 223
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 1.299e-55 Identity = 102/176 (57.95%), Postives = 125/176 (71.02%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANNSTSFDLTGELEVF 636 W VAF CESCF V +L T KW+P +P RL ER+ +LP +D+FV TADP EPPI+ V+TVLSLLAV+YPA++LACYVSDDGCSPL ++SL EASKFAK+WVPFCKKYN RVRAP RYFL+ +EF +DWEK K EYE+L +E A +S D+ + E F Sbjct: 51 WLVAFFCESCFFLVCLLITCLKWSPADTKPFPDRLDERVHDLPSVDMFVPTADPVREPPIMVVDTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNTRVRAPSRYFLKPIS--VATEDYEFNRDWEKTKREYEKLRRKVEDATGDSHMLDVEDDFEAF 224
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 1.875e-54 Identity = 106/217 (48.85%), Postives = 136/217 (62.67%), Query Frame = 1 Query: 7 CQKTTH-----RFLDVTIXXXXXXXXXXXXXXXKHNGFAWFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWE--FQQDWEKMKEEYERLCGNIEAAANNSTSFDLTGELEVF 636 C++ +H R +D+TI N W +AF CESCF+ VW++ T KW+P Y L ER+ +LP LD+FV TAD E PI+TVNTVLSLLAV+YPA++LACYVSDDGCSPL ++SL EASKF K+W PFCKKYN+RVRAPFRYFL P ++ + F +DW+ MK EY +LC +E A +S D + E F Sbjct: 12 CERISHKSYVLRAVDLTILGLLYSLLLYRILHISENDNVWLLAFFCESCFSLVWLIFTCLKWSPAEDIPYINTLNERVHDLPSLDMFVPTADTVRESPIITVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYFLN-----PLVATDDSVFSKDWKMMKREYVKLCRKVEDATGDSHWLDADDDFEAF 223
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 1.817e-49 Identity = 95/175 (54.29%), Postives = 123/175 (70.29%), Query Frame = 1 Query: 118 AFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPA--HRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANNSTSFDLTGELEVF 636 A CE+ FTF+W+L KW+P+ ++T+P+ L ERI ELP +D+FVTTADP LEPP++TVNTVLSLLA+DYPA +LACYVSDDGCSPL Y+L EA++FA+ WVPFC+++ + VRAPFRYF + P + +F +DW MK EYE+L IE A S GE F Sbjct: 53 ALACEAWFTFMWLLNVNAKWSPVRFDTFPENLAERIDELPAVDMFVTTADPVLEPPLVTVNTVLSLLALDYPAAGEKLACYVSDDGCSPLTCYALREAARFARTWVPFCRRHGVAVRAPFRYFSSTPEFGP--ADGKFLEDWTFMKSEYEKLVHRIEDADEPSLLRHGGGEFAEF 225
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 4.485e-40 Identity = 85/175 (48.57%), Postives = 111/175 (63.43%), Query Frame = 1 Query: 97 NGFAWFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYP--AHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESD-EPPCASSWEFQQDWEKMKEEYERLCGNIE 582 +G W VA +CE+ F + L KW+P+ + T P+ L + ELP +D+ VTTADP LEPP++TVNTVLSLLA+DYP RLACYVSDDGCSPL ++L EA+ FA WVPFC++Y + VRAPFRYF S E + +F DW MK+EY++L I+ Sbjct: 79 DGGVWRVALVCEAWFAALCALNVSAKWSPVRFVTRPENLVAEGRTPSTTAAEYGELPAVDMLVTTADPALEPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYFSSSSSPESGGPADRKFLDDWTFMKDEYDKLVRRIK 253
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 9.991e-40 Identity = 87/183 (47.54%), Postives = 114/183 (62.30%), Query Frame = 1 Query: 91 KHNGFA------WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYP--AHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESD-EPPCASSWEFQQDWEKMKEEYERLCGNIE 582 +H+G A W VA +CE+ F + L KW+P+ + T P+ L + ELP +D+ VTTADP LEPP++TVNTVLSLLA+DYP RLACYVSDDGCSPL ++L EA+ FA WVPFC++Y + VRAPFRYF S E + +F DW MK+EY++L I+ Sbjct: 71 RHHGGAGGDAGVWRVALVCEAWFAALCALNVSAKWSPVRFVTRPENLVAEGRTPSTTAAEYGELPAVDMLVTTADPALEPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYFSSSSSPESGGPADRKFLDDWTFMKDEYDKLVRRIK 253
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.061e-37 Identity = 77/165 (46.67%), Postives = 100/165 (60.61%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEA 585 W ++ +CE F W+L KW PI+ TY RL R + +L P+D+FV+T DP EPPI+T NT+LS+LAVDYP ++++CYVSDDG S L F +L E S+FA+ WVPFCKKYN+ RAP YF + D F +D MK EYE I A Sbjct: 244 WLISVICEIWFALSWILDQFPKWFPINRETYLDRLSMRFERDGEKNKLAPVDVFVSTVDPLKEPPIITANTILSILAVDYPVNKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYNVEPRAPEFYFSEKIDYLKDKVQTTFVKDRRAMKREYEEFKVRINA 408 The following BLAST results are available for this feature:
BLAST of FC868889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868889 ID=FC868889; Name=FC868889; organism=Citrus clementina; type=EST; length=659bpback to top |