FC868889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.803e-34 Identity = 75/165 (45.45%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKE------LPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEA 585 W + +CE F W+L KW PI TY RL R + L +D+FV+T DP EPP++T NTVLS+LAVDYP +++CYVSDDG S L F SL E ++FA+ WVPFCKK++I RAP YF ++ D F Q+ MK EYE I A Sbjct: 296 WLTSIICEIWFAVSWILDQFPKWYPIDRETYLDRLSLRYEREGEPSLLSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYFSQKVDYLKDKVHPNFVQERRAMKREYEEFKVRINA 460
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.272e-34 Identity = 74/170 (43.53%), Postives = 98/170 (57.65%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANNS 600 W + +CE F W+L KW PI TY RL R + EL P+D+FV+T DP EPP++T NTVLS+LAVDYP ++ACYVSDDG + L F +L ++FA+ WVPFCKK++I RAP YF ++ D F + MK +YE I A + S Sbjct: 311 WLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSELAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSYTAEFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKHKVDPAFVMERRAMKRDYEEFKVKINALVSVS 480
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.272e-34 Identity = 74/157 (47.13%), Postives = 95/157 (60.51%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERI------KELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYE 561 W ++ +CE F W+L KW PI+ TY RL R +L +DIFV+T DP EPP++T NTVLS+LAVDYP +++CYVSDDG + L F +L E S+FA+ WVPF KKYNI RAP YF ++ D F +D MK EYE Sbjct: 305 WLLSVICEIWFALSWILDQFPKWFPINRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFVKKYNIEPRAPEWYFSQKIDYLKDKVHPSFVKDRRAMKREYE 461
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.272e-34 Identity = 72/157 (45.86%), Postives = 96/157 (61.15%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYE 561 W + +CE F WVL KW+PI+ TY RL R + +L +D FV+T DP EPP++T NTVLS+LA+DYP +++CYVSDDG + L+F SLVE + FA+ WVPFCKKY+I RAP YF + D F ++ MK +YE Sbjct: 213 WLTSVICEIWFAVSWVLDQFPKWSPINRETYIDRLSARFEREGEQSQLAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCYVSDDGAAMLSFESLVETADFARKWVPFCKKYSIEPRAPEFYFSLKIDYLRDKVQPSFVKERRAMKRDYE 369
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.066e-33 Identity = 69/162 (42.59%), Postives = 98/162 (60.49%), Query Frame = 1 Query: 106 AWFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKE-LPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAA 588 AW E F WV+T +W P+ T+ RL ER KE LP +D+FV TADP+ EPP L ++T+LS++A +YP+ +++ Y+SDDG S L FY+L EAS FAK W+PFC++YNI R+P YF S ++W +K YE + I++A Sbjct: 54 AWLGMAAAELWFAVYWVITQSVRWCPVRRRTFKNRLAERYKENLPGVDVFVCTADPHAEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASMFAKKWLPFCRRYNIEPRSPAAYFSESEGHHNLCS----PKEWSFIKNLYEEMRERIDSA 211
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.066e-33 Identity = 73/189 (38.62%), Postives = 114/189 (60.32%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERI-----------KELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYE----RLCGNIEAAANNSTSFDLTGELE 630 W ++ +CE F F W+L K PI+ +T + L+++ +LP +D+FV+TADP EPP++T NT+LS+LAVDYP +++CY+SDDG + L+F ++ EA+ FA LWVPFC+K+NI R P YF + D S +F +D K+K EY+ R+ G ++ S +F+ E++ Sbjct: 301 WLMSIICELWFGFSWILDQIPKLCPINRSTDLEVLRDKFDMPSPSNPTGRSDLPGIDLFVSTADPEKEPPLVTANTILSILAVDYPVEKVSCYLSDDGGALLSFEAMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRIDFVKDRRKIKREYDEFKVRINGLPDSIRRRSDAFNAREEMK 489
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.545e-32 Identity = 70/167 (41.92%), Postives = 96/167 (57.49%), Query Frame = 1 Query: 103 FAWFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKE--LPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANN 597 +AW E F F WVLT +W P+ T+ RL + E LP +DIFV TADP EPP+L ++TVLS++A DY +L Y+SDD S L FY L EAS+FAK W+PFCKKY + R+P YF + + P ++W MKE Y+ + + + N+ Sbjct: 66 WAWLGMLAAELWFGFYWVLTLSVRWCPVYRRTFKDRLAQSYSEDELPSVDIFVCTADPTAEPPMLVISTVLSVMAYDYLPEKLNIYLSDDAGSVLTFYVLCEASEFAKHWIPFCKKYKVEPRSPAAYFAKVASPPDGCG----PKEWFTMKELYKDMTDRVNSVVNS 228
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.107e-30 Identity = 68/162 (41.98%), Postives = 95/162 (58.64%), Query Frame = 1 Query: 106 AWFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKE-LPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAA 588 AW E F WV+ +W P T+ RL ER ++ LP +DIFV TADP EPP L ++T+LS++A +YP+ +++ Y+SDDG S L FY+L EAS FAK W+PFCK+YNI R+P YF E + ++W +K YE + I+ A Sbjct: 59 AWLGMAAAELWFAVYWVIAQSVRWRPFRRRTFRDRLAERYEQNLPGVDIFVCTADPQSEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASIFAKKWLPFCKRYNIEPRSPAAYF----SESKVHHNLCIPKEWALIKNLYEEMRERIDTA 216
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.107e-30 Identity = 74/197 (37.56%), Postives = 110/197 (55.84%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK-----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYE----RLCGNIEAAANNSTSFDLTGELEVFFTQCQN 654 W ++ +CE F W+L K PI+ T L+E+ + +LP LD+FV+TADP EPP++T NT+LS+LA DYP +LACYVSDDG + L F ++ EA+ FA +WVPFC+K+NI R P YF + D +F +D ++K EY+ R+ ++ S ++ E++ Q QN Sbjct: 323 WGMSVVCELWFALSWLLDQLPKLCPINRATDLNVLKEKFETPTPSNPTGKSDLPGLDMFVSTADPEKEPPLVTSNTILSILAADYPVEKLACYVSDDGGALLTFEAMAEAASFANMWVPFCRKHNIEPRNPDSYFSLKRDPYKNKVKADFVKDRRRVKREYDEFKVRINSLPDSIRRRSDAYHAREEIKAMKLQRQN 519
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.221e-30 Identity = 64/175 (36.57%), Postives = 100/175 (57.14%), Query Frame = 1 Query: 124 LCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANNSTSFDLTGELEVFFTQC 648 L + F+W TT + PI YP++ + ++ P LD+F+ TADPY EPP++ VNT LS++A +YP+H+++ YVSDDG S L ++L+EA+KF+K W+PFCK N++ R+P YF + S + E +K YE + +E +G++E F C Sbjct: 59 LSDIVLAFMWATTTSLRLNPIHRTEYPEKYAAKPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSHKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKNNNVQDRSPEVYF--------SSKSHSSSDEAENLKMMYEDMKSRVEHVVE-------SGKVETAFIAC 218 The following BLAST results are available for this feature:
BLAST of FC868889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868889 ID=FC868889; Name=FC868889; organism=Citrus clementina; type=EST; length=659bpback to top |