FC868889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.495e-30 Identity = 64/175 (36.57%), Postives = 100/175 (57.14%), Query Frame = 1 Query: 124 LCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANNSTSFDLTGELEVFFTQC 648 L + F+W TT + P+ P++ + ++ P LD+F+ TADPY EPP++ VNT LS++A +YP+ +++ YVSDDG S L F++L+EA+KF+K W+PFCKK N++ R+P YF ES + E +K YE + +E +G++E F C Sbjct: 62 LSDIVLAFMWATTTSLRLNPVHRTECPEKYAAKPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTFFALIEAAKFSKQWLPFCKKNNVQDRSPEVYFSSESHSR--------SDEAENLKMMYEDMKSRVEHVVE-------SGKVETAFITC 221
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 7.176e-30 Identity = 70/190 (36.84%), Postives = 110/190 (57.89%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK-----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYE----RLCGNIEAAANNSTSFDLTGELEV 633 W ++ +CE F F W+L K P++ +T L+E+ + +LP LD+FV+TADP EP + T T+LS+LAVDYP +LACYVSDDG + L F ++ EA+ FA +WVPFCKK++I R P YF + D +F +D ++K E++ R+ G ++ S +F+ ++++ Sbjct: 326 WGMSIVCELWFAFSWLLDMLPKVNPVNRSTDLAVLKEKFETPSPSNPHGRSDLPGLDVFVSTADPEKEPVLTTATTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFANVWVPFCKKHDIEPRNPDSYFSVKGDPTKGKRRNDFVKDRRRVKREFDEFKVRINGLPDSIRRRSDAFNAREDMKM 515
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.224e-29 Identity = 70/189 (37.04%), Postives = 107/189 (56.61%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKE-----------LPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYE----RLCGNIEAAANNSTSFDLTGELE 630 W ++ +CE F F W+L K PI+ T L ++ ++ LP +D+FV+TADP EPP++T NT+LS+LAVDYP +L+ Y+SDDG + L F ++ EA +FA+ WVPFC+K++I R P YF + D +F +D +K EY+ R+ G E + F++ EL+ Sbjct: 212 WGLSIVCEIWFAFSWILDILPKLNPINRATDLAALHDKFEQPSPSNPTGRSDLPGVDVFVSTADPEKEPPLVTANTLLSILAVDYPIEKLSAYISDDGGAILTFEAMAEAVRFAEYWVPFCRKHDIEPRNPDSYFSIKKDPTKNKKRQDFVKDRRWIKREYDEFKVRINGLPEQIKKRAEQFNMREELK 400
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.599e-29 Identity = 73/194 (37.63%), Postives = 107/194 (55.15%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK-----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYE----RLCGNIEAAANNSTSFDLTGELEVFFTQ 645 W ++ +CE F WVL K PI+ T L+++ + +LP +DIFV+TADP EP ++T NT+LS+LA DYP +LACYVSDDG + L F ++ EA+ FA LWVPFC+K+ I R P YF + D +F +D ++K EY+ R+ G +A S ++ E++ Q Sbjct: 296 WGMSIVCELWFALSWVLDQLPKLCPINRATDLSVLKDKFETPTPSNPTGKSDLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDPFKNKVKGDFVKDRRRVKREYDEFKVRVNGLPDAIRRRSDAYHAREEIQAMNLQ 489
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.599e-29 Identity = 73/194 (37.63%), Postives = 107/194 (55.15%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK-----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYE----RLCGNIEAAANNSTSFDLTGELEVFFTQ 645 W ++ +CE F WVL K PI+ T L+++ + +LP +DIFV+TADP EP ++T NT+LS+LA DYP +LACYVSDDG + L F ++ EA+ FA LWVPFC+K+ I R P YF + D +F +D ++K EY+ R+ G +A S ++ E++ Q Sbjct: 296 WGMSIVCELWFALSWVLDQLPKLCPINRATDLSVLKDKFETPTPSNPTGKSDLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDPFKNKVKGDFVKDRRRVKREYDEFKVRVNGLPDAIRRRSDAYHAREEIQAMNLQ 489
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.652e-29 Identity = 64/162 (39.51%), Postives = 95/162 (58.64%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK-----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYE 561 W ++ +CE F F W+L K PI+ L+E+ + +LP LD+F++TADPY EP ++T NT+LS+LA +YP +L Y+SDDG + L F S+ EA FAK+WVPFC+K++I R P YF ++ D +F +D +K EY+ Sbjct: 184 WGISIVCEFWFAFSWLLDQMPKLNPINRAADLAALKEKFESPSPTNPTGRSDLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYFTQKGDPTKGKKRPDFVKDRRWIKREYD 345
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.652e-29 Identity = 64/162 (39.51%), Postives = 95/162 (58.64%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK-----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYE 561 W ++ +CE F F W+L K PI+ L+E+ + +LP LD+F++TADPY EP ++T NT+LS+LA +YP +L Y+SDDG + L F S+ EA FAK+WVPFC+K++I R P YF ++ D +F +D +K EY+ Sbjct: 184 WGISIVCEFWFAFSWLLDQMPKLNPINRAADLAALKEKFESPSPTNPTGRSDLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYFTQKGDPTKGKKRPDFVKDRRWIKREYD 345
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.652e-29 Identity = 70/188 (37.23%), Postives = 105/188 (55.85%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK-----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYE----RLCGNIEAAANNSTSFDLTGEL 627 W ++ CE F F W+L + K P+ L ER + +LP +D+FVT+ADP EPP++T NT+LS+LA DYP +LACY+SDDG + L+F +L E + FA+ WVPFC+K+ + R P YF ++ D +F ++ K+K EY+ R+ EA S +++ EL Sbjct: 356 WAMSVACEVWFAFSWLLDSLPKLCPVHRAADLAVLAERFESPTARNPKGRSDLPGIDVFVTSADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLSFEALAETASFARTWVPFCRKHGVEPRCPEAYFGQKRDFLKNKVRVDFVRERRKVKREYDEFKVRVNSLPEAIRRRSDAYNAGEEL 543
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 6.075e-29 Identity = 65/161 (40.37%), Postives = 99/161 (61.49%), Query Frame = 1 Query: 124 LCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYF---LR-ESDEPPCASSWEFQQDWEKMKEEYERL--CGNIEAA 588 L + F+W TT ++ P+ YP++ ++ P LD+F+ TADPY EPP++ VNT LS++A +YP+ +++ YVSDDG S L ++L+EA+KF+K W+PFCKK N++ R+P YF LR SDE + + +E MK E + G +E A Sbjct: 81 LSDIVLAFMWATTTSLRYKPVRRTEYPEKYAAEPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKKNNVQDRSPEVYFSSKLRSRSDE-----AENIKMMYEDMKSRVEHVVESGKVETA 236
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.075e-29 Identity = 65/162 (40.12%), Postives = 97/162 (59.88%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK-----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYE 561 W ++ +CE F W+L K P++ T L+++ + +LP LDIFV+TADP EPP++T NT+LS+LA DYP +L+CYVSDDG + L F ++ EA+ FA +WVPFC+K++I R P YF + D +F +D ++K EY+ Sbjct: 345 WGMSVVCELWFGLSWLLDQLPKLCPVNRATDLAVLKDKFETPTPSNPNGRSDLPGLDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRSDFVKDRRRVKREYD 506 The following BLAST results are available for this feature:
BLAST of FC868889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868889 ID=FC868889; Name=FC868889; organism=Citrus clementina; type=EST; length=659bpback to top |