FC868889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.075e-29 Identity = 65/162 (40.12%), Postives = 97/162 (59.88%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK-----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYE 561 W ++ +CE F W+L K P++ T L+++ + +LP LDIFV+TADP EPP++T NT+LS+LA DYP +L+CYVSDDG + L F ++ EA+ FA +WVPFC+K++I R P YF + D +F +D ++K EY+ Sbjct: 345 WGMSVVCELWFGLSWLLDQLPKLCPVNRATDLAVLKDKFETPTPSNPNGRSDLPGLDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRSDFVKDRRRVKREYD 506
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.075e-29 Identity = 70/197 (35.53%), Postives = 109/197 (55.33%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK-----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYE----RLCGNIEAAANNSTSFDLTGELEVFFTQCQN 654 W ++ +CE F W+L K PI+ T Q L+E+ + +LP D+FV+TADP EPP++T NT+LS+LA +YP +L+CYVSDDG + L F ++ EA+ FA +WVPFC+K+ I R P YF + D +F +D ++K E++ R+ ++ S ++ E++ Q QN Sbjct: 326 WGMSVVCELWFALSWLLDQLPKLCPINRATDLQVLKEKFETPTASNPTGKSDLPGFDVFVSTADPEKEPPLVTANTILSILAAEYPVEKLSCYVSDDGGALLTFEAMAEAASFANIWVPFCRKHAIEPRNPDSYFSLKRDPYKNKVKSDFVKDRRRVKREFDEFKVRVNSLPDSIRRRSDAYHAREEIKAMKMQRQN 522
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.353e-28 Identity = 70/188 (37.23%), Postives = 107/188 (56.91%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK-----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYE----RLCGNIEAAANNSTSFDLTGEL 627 W ++ CE F W+L K P++ T L+ER + +LP +D+FV+TADP EPP++T NT+LS+LAVDYP +LACY+SDDG + L F +L + + FA WVPFC+K+NI R P YF ++ + +F ++ ++K EY+ R+ EA S ++++ EL Sbjct: 347 WGMSTTCELWFALSWLLDQLPKLCPVNRLTDLGVLKERFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKLACYLSDDGGALLTFEALAQTASFASTWVPFCRKHNIEPRNPEAYFGQKRNFLKNKVRLDFVRERRRVKREYDEFKVRINSLPEAIRRRSDAYNVHEEL 534
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.773e-28 Identity = 63/169 (37.28%), Postives = 99/169 (58.58%), Query Frame = 1 Query: 91 KHNGFAWFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK-ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAAN 594 + + W ++ + + F F WVL K +PI L +R +LP +D+FVTT DP EP + TVNT+LS+LA DYP R ACY+SDDG + +++ ++VE +KFA+LWVPFC+K+ + R+P YF ++ E D +++ EYE I++ ++ Sbjct: 91 RDGAWLWTMSMVGDVWFGFSWVLNQLPKQSPIKRVPDIAALADRHSGDLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYFAMKTQAYKGGVPGELMSDHRRVRREYEEFKVRIDSLSS 259
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.146e-27 Identity = 63/163 (38.65%), Postives = 97/163 (59.51%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK-ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAAN 594 W ++ + + F F WVL K +PI L +R +LP +D+FVTT DP EP + TVNT+LS+LA DYP R ACY+SDDG + +++ ++VE +KFA+LWVPFC+K+ + R+P YF ++ E D +++ EYE I++ ++ Sbjct: 127 WTMSMVGDVWFGFSWVLNQLPKLSPIKRVPDLAALADRHSGDLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYFAMKTQAYKGGVPGELMSDHRRVRREYEEFKVRIDSLSS 289
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.354e-27 Identity = 61/170 (35.88%), Postives = 97/170 (57.06%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK-----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEA 585 W ++ +CE F F W+L K P+++ T + L+ + +LP +D+FV+TAD EPP++T NT+LS+L+VDYP +L+ Y+SDDG S + F ++ EA+ FAK+WVPFC+K+ I R P YF + D +F ++ +K Y+ + A Sbjct: 151 WLLSVICELWFAFSWLLDQIPKLFPVNHATDIEALKATFETPNPDNPTGKSDLPGIDVFVSTADAEKEPPLVTANTILSILSVDYPVEKLSVYISDDGGSLVTFEAIAEAASFAKIWVPFCRKHKIEPRNPESYFGLKRDPYKDKVRHDFVRERRYVKRAYDEFKVRVNA 320
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.686e-27 Identity = 65/157 (41.40%), Postives = 87/157 (55.41%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIKE------LPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYE 561 W + CE W++ K +P + TY RL R ++ L +D+FV AD EPP+ T NTVLS+LA DYPA +ACYV DDG L F SL EA+ FA+ W+PFC+++ + RAP YF R D ++ F +D MK EYE Sbjct: 77 WVTSVACELWLAASWLIAQLPKLSPANRVTYLDRLASRYEKGGEASRLAGVDVFVAAADAAREPPLATANTVLSVLAADYPAGGVACYVHDDGADMLVFESLFEAAGFARRWIPFCRRHGVEPRAPELYFARGVDYLRDRAAPSFVKDRRAMKREYE 233
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26 Identity = 63/167 (37.72%), Postives = 94/167 (56.29%), Query Frame = 1 Query: 103 FAWFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERI------KELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEA 585 F W+++ + + F W+L K PI LQ++ LP LD+F+ T DP EP I T+N +LS+LA DYP + ACY+SDDG S +++ L+E +KFA LWVPFC+K++I RAP YF +S ++ +F D M+ EY+ ++A Sbjct: 120 FFWWISVIGDFWFGVSWLLNQVAKLKPIRRVPDLNLLQQQFDLPDGNSNLPGLDVFINTVDPINEPMIYTMNAILSILAADYPVDKHACYLSDDGGSIIHYDGLLETAKFAALWVPFCRKHSIEPRAPESYFAVKSRPYAGSAPEDFLSDHRYMRREYDEFKVRLDA 286
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26 Identity = 63/172 (36.63%), Postives = 96/172 (55.81%), Query Frame = 1 Query: 91 KHNGFAWFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERIK-------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEA 585 + + W ++ + F F W L K PI L +R + ELP +D+FVTT DP EP + TVN++LS+LA DYP R ACY+SDDG + +++ ++VE +KFA+LWVPFC+K+ + RAP YF ++ + E D +++ EYE I++ Sbjct: 121 RDGAWLWTMSMAGDVWFGFSWALNQLPKLNPIKRVADLAALADRQQHGTSGGGELPGVDVFVTTVDPVDEPILYTVNSILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRAPESYFAMKTQAYRGGVAGELMSDRRRVRREYEEFKVRIDS 292
BLAST of FC868889 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.322e-25 Identity = 64/157 (40.76%), Postives = 86/157 (54.78%), Query Frame = 1 Query: 109 WFVAFLCESCFTFVWVLTTGTKWTPISYNTYPQRLQERI------KELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYE 561 W + E F F W+L K PI+ L+ R LP LDIFVTTADP EP + T N++LS+LA DYP R CY+SDD L + ++ EA+KFA LWVPFC+K+ I R P YF +S + EF D ++++EY+ Sbjct: 136 WVTSIAGEFWFGFSWLLDQLPKLNPINRVPDLAVLRRRFDHADGTSSLPGLDIFVTTADPIKEPILSTANSILSILAADYPVDRNTCYLSDDSGMLLTYEAMAEAAKFATLWVPFCRKHAIEPRGPESYFELKSHPYMGRAQEEFVNDRRRVRKEYD 292 The following BLAST results are available for this feature:
BLAST of FC868889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868889 ID=FC868889; Name=FC868889; organism=Citrus clementina; type=EST; length=659bpback to top |