FC868968
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT1_SCHCO (Actin-1 OS=Schizophyllum commune GN=ACT1 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.682e-22 Identity = 71/192 (36.98%), Postives = 94/192 (48.96%), Query Frame = 1 Query: 76 KMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ A V+D GS + KAG A D AP V PS + R G + V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN FY + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 4 EVAALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGFALPHAILRLDLAGRDLTDFLIKNL 193
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT1_NAEGR (Actin-1 OS=Naegleria gruberi GN=ACT1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.682e-22 Identity = 75/200 (37.50%), Postives = 98/200 (49.00%), Query Frame = 1 Query: 82 EAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLS 648 +A V+D GS + KAG A D AP V PS + R L+ + V D M P+ G I +WD ME + HH Y L G +L PL +PKA RE++ Q+MFETF + Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L + S N S Sbjct: 5 QALVIDNGSGMCKAGFAGED-APRAVFPSLIGRPLQRSIMVGMGNKDAYVGDEAMSKKGILALKYPIEHGIITNWDDMEKIWHHTFYNELRVGPEEHGVLLTEAPL-NPKANREKMTQIMFETFRVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILMERGYSFNTS 202
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT_YEAST (Actin OS=Saccharomyces cerevisiae GN=ACT1 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.575e-22 Identity = 70/195 (35.90%), Postives = 97/195 (49.74%), Query Frame = 1 Query: 73 SKMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGK 624 S++ A V+D GS + KAG A D AP V PS + R G + V D P+ G + +WD ME + HH Y L E +L T+ +PK+ RE++ Q+MFETFN+ FY S QAVLSLY+ GR +G +D G G + P+ G A R ++ G DLT L + L + Sbjct: 3 SEVAALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPMNPKSNREKMTQIMFETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTDYLMKILSE 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT_SACBA (Actin OS=Saccharomyces bayanus GN=ACT1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.575e-22 Identity = 70/195 (35.90%), Postives = 97/195 (49.74%), Query Frame = 1 Query: 73 SKMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGK 624 S++ A V+D GS + KAG A D AP V PS + R G + V D P+ G + +WD ME + HH Y L E +L T+ +PK+ RE++ Q+MFETFN+ FY S QAVLSLY+ GR +G +D G G + P+ G A R ++ G DLT L + L + Sbjct: 3 SEVAALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPMNPKSNREKMTQIMFETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTDYLMKILSE 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT_ENCCU (Actin OS=Encephalitozoon cuniculi GN=ECU01_0460 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 4.575e-22 Identity = 72/188 (38.30%), Postives = 96/188 (51.06%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPS-----QMKRVLEDGSSSVDNSTLVEDVTMD-------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLL 606 ++A V+D GS ++K+G A D AP V PS + K V+ G D E T P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN+ FY S QAVLSLYA GR +G D G G + P+ EG A R ++ G DLT L Sbjct: 5 VQALVIDIGSGVVKSGFA-GDDAPRAVFPSIVGFPKHKGVMV-GMGQKDAYVGDEAQTKRGILHIKYPIEHGIVNNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKITQIMFETFNVPSFYISIQAVLSLYASGRTTGIVFDSGDGVSHVVPIYEGYSLPYAINRIDLAGRDLTDYL 189
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT_CANGA (Actin OS=Candida glabrata GN=ACT1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.575e-22 Identity = 70/195 (35.90%), Postives = 97/195 (49.74%), Query Frame = 1 Query: 73 SKMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGK 624 S++ A V+D GS + KAG A D AP V PS + R G + V D P+ G + +WD ME + HH Y L E +L T+ +PK+ RE++ Q+MFETFN+ FY S QAVLSLY+ GR +G +D G G + P+ G A R ++ G DLT L + L + Sbjct: 3 SEVAALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPMNPKSNREKMTQIMFETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTDYLMKILSE 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT2_SCHCO (Actin-2 OS=Schizophyllum commune GN=ACT2 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.575e-22 Identity = 70/192 (36.46%), Postives = 98/192 (51.04%), Query Frame = 1 Query: 76 KMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTMD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 +++A V+D GS + KAG A D AP V PS + R G S V + + + P+ G + +WD ME + HH Y L E +L T+ +PK RE++ Q+MFETFN+ F+ S QAVLSLYA GR +G +D G G P+ EG A +R ++ G DLT+ L L Sbjct: 4 EIQAVVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHHGVMVGLSNKDSYVGDEAQAKRGVLTLKYPIEHGTVTNWDDMEKIWHHTYYNELRVAP-EEHPVLLTEAPLNPKTNREKMTQIMFETFNVPAFHVSIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGFSLPHAIQRLDLAGRDLTERLVLHL 193
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT1_PHYIN (Actin-1 OS=Phytophthora infestans GN=ACTA PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.575e-22 Identity = 71/191 (37.17%), Postives = 94/191 (49.21%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++A VVD GS + KAG A D AP V PS + R G V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN+ Y + QAVLSLYA GR +GC +D G G P+ EG A R ++ G DLT + + L Sbjct: 6 VQALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPKHLGIMVGMDQKDAYVGDEAQSKRGVLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANRERMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGCVLDSGDGVSHTVPIYEGYALPHAIVRLDLAGRDLTDYMMKIL 194
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT_AJECG (Actin OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=HCBG_08711 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 5.975e-22 Identity = 70/194 (36.08%), Postives = 96/194 (49.48%), Query Frame = 1 Query: 76 KMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGK 624 ++ A V+D GS + KAG A D AP V PS + R G + V D P+ G + +WD ME + HH Y L E +L T+ +PK+ RE++ Q++FETFN FY S QAVLSLYA GR +G +D G G + P+ EG A R ++ G DLT L + L + Sbjct: 4 EVAALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHHGIMIGMGQKDSYVGDEAQSKRGILTLRYPIEHGVVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPINPKSNREKMTQIVFETFNAPAFYVSIQAVLSLYASGRTTGIVLDSGDGVTHVVPIYEGFALPHAISRIDMAGRDLTNYLMKILAE 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTC_STYPL (Actin, cytoplasmic OS=Styela plicata PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.975e-22 Identity = 72/192 (37.50%), Postives = 94/192 (48.96%), Query Frame = 1 Query: 76 KMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ A VVD GS + KAG A D AP V PS + R G V + V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 4 EVAALVVDNGSGMCKAGFA-EDDAPRAVFPSIVGRPRHQGVMVGMVQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNTRAMYVNIQAVLSLYASGRTTGLVMDSGDGVSHTVPIYEGYALPHAIFRLDLAGRDLTDYLMKIL 193 The following BLAST results are available for this feature:
BLAST of FC868968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868968 ID=FC868968; Name=FC868968; organism=Citrus clementina; type=EST; length=684bpback to top |