FC868968
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTS_ORYLA (Actin, alpha skeletal muscle OS=Oryzias latipes GN=acta1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 73/189 (38.62%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 A V D GS L+KAG A D AP V PS + R G + V D P+ G I +WD ME + HH Y L +L PL +PKA RE++ Q+MFETFN+ Y + QAVLSLYA GR +G +D G G PV EG A R ++ G DLT L + L Sbjct: 9 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDAGDGVTHNVPVYEGYALPHAIMRLDLAGRDLTDYLMKIL 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTS_OREMO (Actin, alpha skeletal muscle OS=Oreochromis mossambicus GN=acta1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 73/189 (38.62%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 A V D GS L+KAG A D AP V PS + R G + V D P+ G I +WD ME + HH Y L +L PL +PKA RE++ Q+MFETFN+ Y + QAVLSLYA GR +G +D G G PV EG A R ++ G DLT L + L Sbjct: 9 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDAGDGVTHNVPVYEGYALPHAIMRLDLAGRDLTDYLMKIL 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTS_CYPCA (Actin, alpha skeletal muscle OS=Cyprinus carpio GN=acta1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 73/189 (38.62%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 A V D GS L+KAG A D AP V PS + R G + V D P+ G I +WD ME + HH Y L +L PL +PKA RE++ Q+MFETFN+ Y + QAVLSLYA GR +G +D G G PV EG A R ++ G DLT L + L Sbjct: 9 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDAGDGVTHNVPVYEGYALPHAIMRLDLAGRDLTDYLMKIL 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTSA_TAKRU (Actin, alpha skeletal muscle A OS=Takifugu rubripes GN=acta1a PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 73/189 (38.62%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 A V D GS L+KAG A D AP V PS + R G + V D P+ G I +WD ME + HH Y L +L PL +PKA RE++ Q+MFETFN+ Y + QAVLSLYA GR +G +D G G PV EG A R ++ G DLT L + L Sbjct: 9 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDAGDGVTHNVPVYEGYALPHAIMRLDLAGRDLTDYLMKIL 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTM_HELTB (Actin, cytoskeletal OS=Heliocidaris tuberculata PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 71/192 (36.98%), Postives = 93/192 (48.44%), Query Frame = 1 Query: 76 KMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ A VVD GS + KAG A D AP V PS + R G + V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 5 EVAALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTM_HELER (Actin, cytoskeletal OS=Heliocidaris erythrogramma PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 71/192 (36.98%), Postives = 93/192 (48.44%), Query Frame = 1 Query: 76 KMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ A VVD GS + KAG A D AP V PS + R G + V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 5 EVAALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTG_XENTR (Actin, cytoplasmic 2 OS=Xenopus tropicalis GN=actg1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 71/192 (36.98%), Postives = 93/192 (48.44%), Query Frame = 1 Query: 76 KMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ A VVD GS + KAG A D AP V PS + R G + V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 4 EIAALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 193
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTG_TRISC (Actin, cytoplasmic 2 OS=Triakis scyllium GN=actg1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 71/192 (36.98%), Postives = 93/192 (48.44%), Query Frame = 1 Query: 76 KMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ A VVD GS + KAG A D AP V PS + R G + V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 4 EIAALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 193
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTG_PENCH (Actin, gamma OS=Penicillium chrysogenum GN=ACT PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 71/194 (36.60%), Postives = 95/194 (48.97%), Query Frame = 1 Query: 76 KMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGK 624 ++ A V+D GS + KAG A D AP V PS + R G + V D P+ G + +WD ME + HH Y L E IL T+ +PK RE++ Q++FETFN FY S QAVLSLYA GR +G +D G G + P+ EG A R ++ G DLT L + L + Sbjct: 4 EVAALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHHGIMIGMGQKDSYVGDEAQSKRGILTLRYPIEHGVVTNWDDMEKIWHHTFYNELRVAP-EEHPILLTEAPINPKFNREKMTQIVFETFNAPAFYVSIQAVLSLYASGRTTGIVLDSGDGVTHVVPIYEGFSLPHAISRVDMAGRDLTDYLMKILAE 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTC_XENLA (Actin, alpha cardiac muscle 1 OS=Xenopus laevis GN=actc1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 72/189 (38.10%), Postives = 92/189 (48.68%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 A V D GS L+KAG A D AP V PS + R G + V D P+ G I +WD ME + HH Y L +L PL +PKA RE++ Q+MFETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A +R ++ G DLT L + L Sbjct: 9 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIQRLDLAGRDLTDYLMKIL 195 The following BLAST results are available for this feature:
BLAST of FC868968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868968 ID=FC868968; Name=FC868968; organism=Citrus clementina; type=EST; length=684bpback to top |