FC869020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_PYRHO (Ribonuclease HII OS=Pyrococcus horikoshii GN=rnhB PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17 Identity = 59/192 (30.73%), Postives = 99/192 (51.56%), Query Frame = 1 Query: 94 IMGIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFEDLKVNDSVGWAVDIIDPRELSAKMLNKNKINLNEISHDSAIGLITRVLNIGVLLTEVYLDTVGDAEKYQAKLSQRFPSIKF----VVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPETR 657 + G+DEAGRGPV+GP+V G + L + DSK L +RE+LF L ++ + V ++ P+E+ + + N++ + + + ++ + ++Y+D+ K A L + +K+ + KAD+ Y +VS ASI+AKVTRDR + E + + FGSGYP DP T+ Sbjct: 3 VAGVDEAGRGPVIGPLVIGVAVIDEKNIERLRDIGVKDSKQLTPGQREKLFSKL-IDILDDYYVLLVTPKEIDERHHSMNELEAEK--------FVVALNSLRIKPQKIYVDSADVDPKRFASLIK--AGLKYEATVIAEHKADAKYEIVSAASIIAKVTRDREI------EKLKQKYGEFGSGYPSDPRTK 177
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_METBF (Ribonuclease HII OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rnhB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.481e-17 Identity = 66/197 (33.50%), Postives = 102/197 (51.78%), Query Frame = 1 Query: 94 IMGIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFEDLKVNDSVGWAVDIIDPRELSAKMLNKNKINLNEISHDSAIGLITRVLNIGVLLTEVYLDTVG-DAEKYQAKLSQRF--------PSIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPETR 657 I GIDEAG+GPV+GPM G + S L L ADSK L +KRE+L +K + G+ V + P ++ + + +NEI + ++VL + +Y D +AE++ + +++ I+ + +AD+ YPVVS ASI+AKV RD + EE + +FGSGYP DP+T+ Sbjct: 3 IAGIDEAGKGPVIGPMCIGGVKIEESRAHILKVLGVADSKKLTPKKREQLAAQIK-KHADGFFVLEVSPSQIDEL---RKIMTMNEI----MVVCFSKVLE-QLKPDLLYADAADVNAERFATNIRKQYSKTNPDHAKEIEIISMHQADATYPVVSAASIIAKVRRDE-----LIEELKKEWGLDFGSGYPSDPKTK 185
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_AERPE (Ribonuclease HII OS=Aeropyrum pernix GN=rnhB PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16 Identity = 65/191 (34.03%), Postives = 100/191 (52.36%), Query Frame = 1 Query: 94 IMGIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFEDLKVNDSVGW-AVDIIDPRELSAKMLNKNKINLNEISHDSAIGLITRVLN-IGVLLTEVYLDTVGDAEKYQAKLSQR-FPSIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPETR 657 ++G+DEAGRG ++G +V + L +L DSK L R EL+ ++ VG+ V+ I P E+ + N+N + + +++R+++ +GV + V +D GD + + L++ +V +KADS YPVVS ASIVAKV RD L + M+ GSGYP DPETR Sbjct: 4 VVGVDEAGRGSLVGDLVVAGFAVEEARLGELQSLGVRDSKQLSPAARVELYREIS---GVGFFTVEAIRPWEIDGE-------NINILVTKAVEEIVSRIVSYLGVHPSLVVVDKYGDVQGLRLALTRLGIEPRSILVEEKADSRYPVVSAASIVAKVVRDARL------QVLRRMYGVRGSGYPSDPETR 178
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_METHJ (Ribonuclease HII OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rnhB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.323e-16 Identity = 66/189 (34.92%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 94 IMGIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFEDLKVNDSVGWAVDIIDPRELSAKMLNKNKINLNEISHDSAIGLITRVLNIGVLLTEVYLDTVGDAEKYQAKLSQRF--PSIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPET 654 I G+DEAG+G VLGPMV + C+ L L ADSK L + RE++ D+K + + + + N+I SH A+ I + T Y+D +E+ + F P V KADSL+P VS ASI+AKV RDR I EE ++ + + GSGYP DP T Sbjct: 2 ICGVDEAGKGSVLGPMVVAAV--GCTDMDDLIALGVADSKKLSSKSREKISADIKAQFPFSIVIRTAHDIDELRRTMTMNEIVAR--SHAEAL--------IPLNCTCAYVDACDVSEERYEETVSSFSPPDCTIVARHKADSLFPPVSAASIIAKVERDR-----IIEELSKE-YGDIGSGYPSDPVT 172
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_SULTO (Ribonuclease HII OS=Sulfolobus tokodaii GN=rnhB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 56/187 (29.95%), Postives = 100/187 (53.48%), Query Frame = 1 Query: 94 IMGIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFEDLKVNDSVGWAVDIIDPRELSAKMLNKNKINLNEISHDSAIGLITRVLNIGVLLTEVYLDTVGDAEKYQAKLSQRFPSIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPET 654 ++GIDEAGRG ++GPM+ + + L + DSK L +RE+LF D+ + S G+ + + P E+ ++ NLNE+++ + I +I ++ + + +D VG+ + + ++ + V + AD + S ASI+AKV RD + +T ++ + +FGSGYP DP+T Sbjct: 3 VVGIDEAGRGSLIGPMIVAGVAIKNDRLKFLKNIGVKDSKQLTRNRREKLF-DIICSYSEGFTIVKVSPEEIDSE-------NLNELTYKAMIKIIYSLVEFKPI--RISIDKVGNTKVVEQEIIKLGMEPNIVTN--ADVYFVEASAASIIAKVIRDNII------DTLKSKYGDFGSGYPSDPKT 171
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_SULSO (Ribonuclease HII OS=Sulfolobus solfataricus GN=rnhB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 63/186 (33.87%), Postives = 98/186 (52.69%), Query Frame = 1 Query: 97 MGIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFEDLKVNDSVGWAVDIIDPRELSAKMLNKNKINLNEISHDSAIGLITRVLNIGVLLTEVYLDTVGDAEKYQAKLSQRFPSIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPET 654 +GIDEAGRG ++GPM+ + + + L + DSK L E+RE+LF D+ N + V + P E+ + NLN++++D+ +I + + + V +D VGD EK +L + K V KAD L+ S ASI+AKV RD + + + ++ +FGSGYP DP T Sbjct: 3 VGIDEAGRGALIGPMIVAGVVISDTKLKFLKGIGVKDSKQLTRERREKLF-DIVANTVEAFTVVKVFPYEI-------DNYNLNDLTYDAVSKIILSLSSFNPEI--VTVDKVGD-EKPVIELINKL-GYKSNVVHKADVLFVEASAASIIAKVIRDN------YIDELKQVYGDFGSGYPADPRT 170
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_METBU (Ribonuclease HII OS=Methanococcoides burtonii (strain DSM 6242) GN=rnhB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 69/203 (33.99%), Postives = 102/203 (50.25%), Query Frame = 1 Query: 94 IMGIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFEDLKVNDSVGWAVDIIDPRELS--AKMLNKNKINLNEISHDSAIGLITRVLNIGVLLTEVYLDTV-GDA-----EKYQAKL----SQRFPSIK--FVVSKK-ADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPETR 657 I+GIDEAG+GPV+GPM G + L L ADSK L ++R L +K + GW V + P ++ K+++ N I VL G ++ E+ D + DA E++ +L ++ P + V+SK AD L+PVVS ASI+AKV RD + E+ +M + GSGYP DP+T+ Sbjct: 3 IIGIDEAGKGPVIGPMCIGGVRIDEDKSNALKNLGVADSKKLSPKRRVHLAAQIK-KYADGWFVYEVSPNQIDELRKLMSMNDI---------------MVLAFGSVIEELPSDKIYADAADVKEERFGKRLFDNYMEKHPDVSPPEVISKHGADDLFPVVSAASILAKVRRDE-----LIEKIKVDMGVDIGSGYPSDPKTK 184
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_ARCFU (Ribonuclease HII OS=Archaeoglobus fulgidus GN=rnhB PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16 Identity = 63/187 (33.69%), Postives = 94/187 (50.27%), Query Frame = 1 Query: 100 GIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFEDLKVNDSVGWAVDIIDPRELSAKMLNKNKINLNEISHDSAIGLITRVLNIGVLLTEV-YLDTVGDAEKYQAKLSQRFPSIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPETR 657 GIDEAG+G V+GP+V + CS + L L DSK L + +REEL E+++ V + P L +M K +NEI + +I R L E+ Y+D+ + ++ + ++ V KAD YP+V+ ASI+AKV R+R + E + +FGSGY DP TR Sbjct: 4 GIDEAGKGCVIGPLVVAGV--ACSDEDRLRKLGVKDSKKLSQGRREELAEEIR--KICRTEVLKVSPENLDERMAAKT---INEILKECYAEIILR------LKPEIAYVDSPDVIPERLSRELEEITGLRVVAEHKADEKYPLVAAASIIAKVEREREI------ERLKEKFGDFGSGYASDPRTR 171
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_THEON (Ribonuclease HII OS=Thermococcus onnurineus (strain NA1) GN=rnhB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.495e-15 Identity = 66/196 (33.67%), Postives = 96/196 (48.98%), Query Frame = 1 Query: 94 IMGIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFEDLKVNDSVGWAVDIIDP---RELSAKMLNKNKINLNEISHDSAIGLITRVLNIGVLLTEVYLDT--VGDA---EKYQAKLSQRFPSIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPETR 657 + GIDEAGRGPVLGPMV + L L DSK L ++RE LF+++ V ++D EL + ++ + LNE ++ + + ++ V VY+D V +A E+ +AKL + KAD + VS ASI+AKV RDR + E ++ + GSGYP DP TR Sbjct: 3 LAGIDEAGRGPVLGPMVIAAVVVDEGNVPKLEELGVKDSKKLTPKRRERLFDEI---------VQLLDDYVILELWPEEIDSREGTLNEFEVENFVKALN---SLKVKPDVVYIDAADVKEARFGEEIKAKLDF---EADIIAEHKADDKFVPVSAASILAKVARDRAI------EKLKDQYGEIGSGYPSDPRTR 177
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_METST (Ribonuclease HII OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rnhB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15 Identity = 63/188 (33.51%), Postives = 92/188 (48.94%), Query Frame = 1 Query: 94 IMGIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFEDLKVNDSVGWAVDIIDPRELSAKMLNKNKINLNEISHDSAIGLITRVLNIGVLLTEVYLDTVGDAE-KYQAKLSQRFPSIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPET 654 I+GIDEAGRG V+GP+V G + + L + DSK L +KR + +K + II P + N N INLNEI + + ++ I + Y+D + E ++ K+ + P++ V KAD Y +VS ASI+AKV RD+ L E + + GSGYP D T Sbjct: 9 ILGIDEAGRGSVIGPLVIGGVLMKKKKIRFLNRIGVKDSKQLNMKKRTIISRKIK---KIAQFKTIIIPAHTIDEKRN-NDINLNEIETEG----MEEIIKI-MKPNACYIDCIDVRENRFHDKIQKINPNMTVVTEHKADETYKIVSAASIIAKVERDKQL------EIIRQEYGSVGSGYPSDKNT 181 The following BLAST results are available for this feature:
BLAST of FC869020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869020 ID=FC869020; Name=FC869020; organism=Citrus clementina; type=EST; length=693bpback to top |