FC869020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_SULAC (Ribonuclease HII OS=Sulfolobus acidocaldarius GN=rnhB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15 Identity = 64/191 (33.51%), Postives = 99/191 (51.83%), Query Frame = 1 Query: 94 IMGIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFEDLKVNDSVGWAVDIID--PRELSAKMLNKNKINLNEISHDSAIGLI--TRVLNIGVLLTEVYLDTVGDAEKYQAKLSQRFPSIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPET 654 ++GIDEAGRG ++GPMV + ++ + L+ + DSK L +KRE LF V +A+ ++ P E+ ++ NLNEI++ + I +I V N + V +D VG+A + ++ S + V AD Y VS ASI+AKV RD + + + +FGSGYPGD +T Sbjct: 3 LVGIDEAGRGSLIGPMVVAGVAIDSNFLKFLSEIGVKDSKKLTRKKREYLF---GVILEYSYAISLVKAYPEEIDSE-------NLNEITYRAMIQIIHSMSVYNPSI----VTVDKVGNASAVEREIININSSPR--VENNADVKYVEVSAASIIAKVVRDNII------NELKKTYGDFGSGYPGDKKT 171
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_PICTO (Ribonuclease HII OS=Picrophilus torridus GN=rnhB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.369e-13 Identity = 61/190 (32.11%), Postives = 92/190 (48.42%), Query Frame = 1 Query: 91 CIMGIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNF--ADSKTLKEEKREELFEDLKVNDSVGWAVDIIDPRELSAKMLNKNKINLNEISHDSAIGLITRVLNIGVLLTEVYLDTVGDAEKYQAKLSQRFPSIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPET 654 C+ GIDEAGRGPV+GPMV + C+ +NF DSK L KR +F D+ + II+P E+ + K +LN + A LI + ++Y+D E ++ + + + AD +VS ASI+AKV RD + E ++++ +FGSGYP DP+T Sbjct: 2 CVCGIDEAGRGPVIGPMVMAMV---CA-----DDINFYVNDSKLLTRNKRSLIFNDV---SGLYHKYYIINPAEIDDAV---KKHSLNNLEEQYAEKLILK-----AECEKIYIDCFDVNESRLERILKDRTGKEVICRHHADRDIKIVSAASIIAKVLRDNEI------EKLKSIYGDFGSGYPSDPKT 166
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_METTH (Ribonuclease HII OS=Methanobacterium thermoautotrophicum GN=rnhB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13 Identity = 58/194 (29.90%), Postives = 93/194 (47.94%), Query Frame = 1 Query: 94 IMGIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFEDLKVNDSVGWAVDIIDPRELSAKMLNKNK---INLNEISHDSAIGLITRVLNIGVLLTEVYLDTVGDAEKYQAKLSQRFPSIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHR---NFGSGYPGDPETR 657 ++GIDEAGRGPV+GP+V + P L + DSK L E+R L ++ + + ++SA +++ + NLNEI + +I V++ V + E+ + ++ F I+ AD+ Y V+ ASI+AKV RD + E+ + +R + GSGYP DP TR Sbjct: 3 VLGIDEAGRGPVIGPLVVAGVMIPERKFSILRKMGVKDSKKLTPERRRFLARKIR-------RIARVFTVKISASDIDRMRERGFNLNEIEKIAIKRIIPEAQPDRVIIDSVDV----KPERLEEEIRSHFGEIEVTAEHGADTRYYPVAAASIIAKVERDLEI------ESIQKKNRKLGDIGSGYPSDPRTR 179
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_METKA (Ribonuclease HII OS=Methanopyrus kandleri GN=rnhB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13 Identity = 62/188 (32.98%), Postives = 86/188 (45.74%), Query Frame = 1 Query: 94 IMGIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFEDLKVNDSVGWAVDIIDPRELSAKMLNKNKINLNEISHDSAIGLITRVLNIGVLLTEVYLDTVGDAEKYQAKLSQRFP-SIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPET 654 +MGIDEAGRGPV GPMV + P + L DSK L R L L ++ + + I+ P E+ + + K + ++ L+ R + EV LD G+ + + P I + ++AD+ Y VVS ASIVAK RD WI E + GSGYP DP T Sbjct: 4 VMGIDEAGRGPVFGPMVVAGVLAP----KRELGLGARDSKELTRSARRRLIRALMSDERLRVDLRIVWPWEIDEEGVAKAEF-------EAIRELVRRAMP-----DEVILDKPGNYSPERLRRELDLPEGINLIAEERADAKYEVVSAASIVAKTYRD-----WIV-RLLELEYGEVGSGYPSDPRT 169
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_PYRAE (Ribonuclease HII OS=Pyrobaculum aerophilum GN=rnhB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.874e-13 Identity = 60/188 (31.91%), Postives = 89/188 (47.34%), Query Frame = 1 Query: 94 IMGIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFED-LKVNDSVGWAVDIIDPRELSAKMLNKNKINLNEISHDSAIGLITRVLNIGVLLTEVYLDTVGDAEKYQAKLSQRFPSIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPET 654 I GIDEAGRGPV+GPMV + + + DSK L RE ++E L+V V + V I+P E+ A +++ +N E+ + + + I + E Y D + + F + K V++ P V+ ASIVAKV RDR + + + +FGSGYP DP T Sbjct: 2 IGGIDEAGRGPVIGPMVIAIV---VGESDDMIKIGVRDSKRLSPGAREAVYEKILRVAACVNYVV--IEPAEIDA-YVSRGMLNALELKYTAQL--------INLCPAEYYYVDSPDVNPKRYESGLVFATGKRVIALHKGEAVPQVAAASIVAKVVRDRLI------QLLKKEVGDFGSGYPSDPRT 169
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_THENV (Ribonuclease HII OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rnhB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12 Identity = 62/187 (33.16%), Postives = 92/187 (49.20%), Query Frame = 1 Query: 100 GIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFE-DLKVNDSVGWAVDIIDPRELSAKMLNKNKINLNEISHDSAIGLITRVLNIGVLLTEVYLDTVGDAEKYQAKLSQRFPSIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPETR 657 G+DEAGRGPV+GPMV + LA L DSK L E+RE L++ L+ D V + V ++P + + + +N E+ + + + I + +VY D + + + F + + VV+ P V+ ASIVAKV RDR L + +E + FGSGYP DP TR Sbjct: 7 GVDEAGRGPVVGPMVIAVV---VGDGGVLARLGVRDSKRLSPERRERLYQLILEAADCVNYVV--VEPAVVDTYVW-RGLLNALELDYTAKL--------IELCPADVYYVDSPDVDPRRYGSALEFITGRRVVAMHKGESVPQVAAASIVAKVVRDR-LVALLKKEVGD-----FGSGYPSDPRTR 173
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_METB6 (Ribonuclease HII OS=Methanoregula boonei (strain 6A8) GN=rnhB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12 Identity = 63/187 (33.69%), Postives = 87/187 (46.52%), Query Frame = 1 Query: 94 IMGIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFEDLKVNDSVGWAVDIIDPRELSAKMLNKNKINLNEISHDSAIGLITRVLNIGVLLTEVYLDTVGDAEKYQAKLSQRFPSIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPET 654 I G+DEAG+G VLGPMV + + + + DSK L +RE LF +K V A +I E+ A + ++ LN + +I ++ + ++ AE + LS + V ADS YPVVS ASIVAKVTRDR + + GSGYP DPET Sbjct: 2 ICGVDEAGKGSVLGPMVIAGVGVGST--EMIDGFGLRDSKQLSPSERERLFVLIKKKCKV--ATVVISAAEIDAF---RREMTLNTCVARAHAVVIAQLAPEIAYVDACDVNPFRYAETVRGYLSS---PCEIVSEHHADSTYPVVSAASIVAKVTRDREI------AKLAKKYGQIGSGYPSDPET 172
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_METS3 (Ribonuclease HII OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rnhB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12 Identity = 64/190 (33.68%), Postives = 88/190 (46.32%), Query Frame = 1 Query: 94 IMGIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFEDLKVNDSVGWAVDIIDPRELSAKMLNKNKINLNEISHDSAIGLITRVLNIGVLLTEVYLDTVG-DAEKYQAKLSQRFPSIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHR-NFGSGYPGDPETR 657 ++GIDEAGRG VLGP+V + P L + DSK L +R L LK + D++ + + INLNEI IG+ + N+ + +D V AE++Q KL+ + V KAD Y VS ASI+AK RD I E + + GSGYP DP T+ Sbjct: 3 VLGIDEAGRGSVLGPLVIAGVIVPEKMDIVLERMGVKDSKRLTPNRRTILSRKLKKM----FEYDLVVISAQDIDNMRADGINLNEIER---IGMEKILSNLNP--EKAIVDAVDIKAERFQNKLAND-TGVNVVAEHKADDNYIEVSAASIIAKQERD----AHIAEINKDYIKMGGIGSGYPSDPITK 178
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_CALMQ (Ribonuclease HII OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rnhB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12 Identity = 61/185 (32.97%), Postives = 88/185 (47.57%), Query Frame = 1 Query: 100 GIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELFEDLKVNDSVGWAVDIIDPRELSAKMLNKNKINLNEISHDSAIGLITRVLNIGVLLTEVYLDTVGDAEKYQAKLSQRFPSIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPET 654 GIDEAGRGPV+GPMV + S + + DSK L R L++ L V+ + I++P E+ + N+ LNE+ LI + T VY+D+ D + + ++ +V AD P+VS ASIVAKV RD + + + +FGSGYP DP T Sbjct: 10 GIDEAGRGPVIGPMVIAIVGWSNSEAEGIGV---KDSKQLTPSGRSRLYK-LIVSKAPCVRHVIVEPSEIDYYV---NRGLLNELEAIKMSELIKACSGV----TRVYVDS-PDPNPSRFRGFINVKDVELIVLNHADESIPLVSAASIVAKVIRDTII------SRLKETYGDFGSGYPSDPRT 176
BLAST of FC869020 vs. ExPASy Swiss-Prot
Match: RNH2_PYRIL (Ribonuclease HII OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rnhB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.855e-11 Identity = 59/188 (31.38%), Postives = 90/188 (47.87%), Query Frame = 1 Query: 94 IMGIDEAGRGPVLGPMVYGCLYCPCSYQQTLATLNFADSKTLKEEKREELF-EDLKVNDSVGWAVDIIDPRELSAKMLNKNKINLNEISHDSAIGLITRVLNIGVLLTEVYLDTVGDAEKYQAKLSQRFPSIKFVVSKKADSLYPVVSGASIVAKVTRDRTLRGWIFEETAENMHRNFGSGYPGDPET 654 I GIDEAGRGPV+GPMV + + L L DSKTL KRE ++ ++V D V + V ++P + + + + +N E+ + + I + E+Y D + + F + + VV+ P V+ ASIVAKV RDR + + + +FGSGYP D +T Sbjct: 2 ICGIDEAGRGPVVGPMVIAAV---AGDGERLLQLGVRDSKTLSPTKREVIYARIIEVADCVNYVV--VEPHIID-EYVRRRMLNSLELDFTARL--------IELCPAELYYVDSPDVNSRRYGDALSFITGRRVVALHGGESVPQVAAASIVAKVIRDRLI------DILKREIGDFGSGYPSDVKT 169 The following BLAST results are available for this feature:
BLAST of FC869020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869020 ID=FC869020; Name=FC869020; organism=Citrus clementina; type=EST; length=693bpback to top |