FC872105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 1.959e-43 Identity = 99/235 (42.13%), Postives = 133/235 (56.60%), Query Frame = 3 Query: 9 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGR----TDTKREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 + +++ FD +K++ C+GKGFY+ +AFI+A S+P FG T KRE+AAFFA +HETT +C++ E YCTP+ Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+ALW+WM R+ SA ++ GFG ING ECG ++VQDR+ Y YC GV PG NL+C Sbjct: 80 LGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDC 314
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.342e-43 Identity = 98/233 (42.06%), Postives = 129/233 (55.36%), Query Frame = 3 Query: 45 IKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC*LDIWYENVTL 629 +K++ +C+GK FY+ +AFI+A S+P FG + KRE+AAFFA +HETT +CF+ E YC P+ Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D VISFKTALW+WM R+ S+ ++ GFG ING ECG +VQDR+ Y YC GV PG NL+C W+ N L Sbjct: 92 LKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDCVNQRWFGNALL 324
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 3.342e-43 Identity = 103/236 (43.64%), Postives = 132/236 (55.93%), Query Frame = 3 Query: 9 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRT---DT-KREVAAFFAHVTHETTD-------------FCFVEEISKTNP-YCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 VA +++P FD + ++ C KGFYT DAF++A ++YP+F T DT KREVAAF A +HETT +CF EE + P YC P P++PCA GK YYGRGPIQ+T N NY AG+AIG D LN+P+ VA D +SFKTA W+WM ++ SA +Q G+GE ING ECG +V DR+ Y YC GV G NL+C Sbjct: 76 VASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDC 311
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.700e-43 Identity = 100/233 (42.92%), Postives = 131/233 (56.22%), Query Frame = 3 Query: 18 LVTPEFFDGIKNQA-PATCEGKG-FYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 +++ FD + N C+GKG FY+ +AFISA S+P FG T KRE+AAFFA +HETT +CF+ E YCTP+ Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+A+W+WM R+ S ++Q GFG ING ECG + ++VQDR+ Y YC GV PG NL+C Sbjct: 71 VISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDC 303
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.658e-42 Identity = 99/233 (42.49%), Postives = 130/233 (55.79%), Query Frame = 3 Query: 18 LVTPEFFDGIKNQA-PATCEGKG-FYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 +++ FD + N C+GKG FY+ +AFISA S+P FG T KRE+AAFFA +HETT +CF+ E YCTP+ Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D +ISFK+A+W+WM R+ S +Q GFG ING ECG + ++VQDR+ Y YC GV PG NL+C Sbjct: 69 VISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDC 301
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 171.4 bits (433), Expect = 4.825e-42 Identity = 96/227 (42.29%), Postives = 127/227 (55.95%), Query Frame = 3 Query: 30 EFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT-DT---KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR------YVHSALN---------------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 +F D +K++ A C +GFYT +AFI+A S+P FG T DT K+EVAAFF +HETT +CF +E + + YC P+ +PCA+GK YYGRGP+QL+ N NY GRAIG D LN+P+ VA D VI+FK A+W+WM H+ + G+G ING ECG +V DR+ Y YC FGV+PG NL+C Sbjct: 94 QFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDC 320
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.825e-42 Identity = 94/227 (41.41%), Postives = 129/227 (56.83%), Query Frame = 3 Query: 30 EFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT-DT---KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR------YVHSAL---------------NQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 +F D +K++ C +GFYT DAFI+A S+P FG T DT K+E+AAFF +HETT +CF +E + ++ YC+P+ ++PCA+GK YYGRGP+QL+ N NY GRAIG D LN+P+ V+ D VI+FK A+W+WM H+ + G+G ING ECG A+V DR+ Y YC GV+PG NL+C Sbjct: 79 QFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRGQDARVADRIGFYQRYCNILGVNPGGNLDC 305
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 6.302e-42 Identity = 99/235 (42.13%), Postives = 127/235 (54.04%), Query Frame = 3 Query: 9 VADLVTPEFF-DGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT-DT---KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR------YVHSALN---------------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 + L+T F D +K++ +C GKGFYT DAFI+A ++P FG T DT KRE+AAF A +HETT +C++ E YC P+ Q+PCA G+ YYGRGPIQ++ N NY AG+AIG D +N+P+ VA D VISFKTA W+WM H+ + GFG ING ECG QVQDR+ Y YC V G NL+C Sbjct: 65 IGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAIGVDLVNNPDLVATDAVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDC 299
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 6.302e-42 Identity = 100/232 (43.10%), Postives = 128/232 (55.17%), Query Frame = 3 Query: 18 LVTPEFFDGI-KNQAPATCEGKGFYTRDAFISALSSYPEFGRT-DT---KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALN------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 L++ FD + K++ C KGFYT DAFI+A +YP FG T DT KRE+AAF +HETT +CFV E + YC+ TPQ+PCA G+ YYGRGPIQ++ N NY GRAIG D LN P+ VA D VISFK+ALW+WM R+ S+ + G+G ING ECG ++VQDR+ + YC GV G NL+C Sbjct: 78 LISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRE-RNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDC 308
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 8.230e-42 Identity = 100/232 (43.10%), Postives = 129/232 (55.60%), Query Frame = 3 Query: 18 LVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRT-DT---KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALN------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 L++ FD +K++ C KGFYT DAFI+A +YP FG T DT KRE+AAF +HETT +CFV E + + YC+ TPQ+PCA G+ YYGRGPIQ++ N NY GRAIG D LN P+ VA D VISFK+ALW+WM R+ S+ + G+G ING ECG ++VQDR+ + YC GV G NL+C Sbjct: 79 LISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPST-YCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDC 309 The following BLAST results are available for this feature:
BLAST of FC872105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872105 ID=FC872105; Name=FC872105; organism=Citrus clementina; type=EST; length=764bpback to top |