FC872105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 9.037e-65 Identity = 117/202 (57.92%), Postives = 142/202 (70.30%), Query Frame = 3 Query: 6 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFG----RTDTKREVAAFFAHVTHETTDFCFVEEISKTNPYCTPTP-QYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 +VA +VT FF+GIKNQA + CEGK FYTR AF+SA+ YP F + KRE+AAFFAH THET FC++ EI+K+N YC PT Q+PCA G+ YYGRGP+Q++ N NY AGRAIGFDGL P VARD V++FK ALW+WM VH + QGFG T R + ECGG N AQ+ RV Y YC++ GVDPGPNL C Sbjct: 68 NVASVVTSSFFNGIKNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHETGHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNSVHGVVPQGFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 5.857e-64 Identity = 118/202 (58.42%), Postives = 146/202 (72.28%), Query Frame = 3 Query: 6 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTDFCFVEEISKTNPYCTPTP-QYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 +VA++VT FF+GIKNQA + CEGK FYTR AF+SA+++YP F T KRE+AAFFAHVTHET FC++ EI+K+N YC + Q+PCA G+ YYGRGP+Q++ N NY AGR IGF+GL P VA+D VI+FKTALW+WM VH + QGFG TIR ING EC G N AQ+ RV Y YC++ VDPGPNL C Sbjct: 79 NVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMNNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.350e-60 Identity = 115/202 (56.93%), Postives = 142/202 (70.30%), Query Frame = 3 Query: 12 ADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEIS-KTNPYCTPTP--QYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 AD++T +F +GI +QA + C GK FYTRDAF+SAL+SY +FGR D+KRE+AA FAH THET FC++EEI + YC QYPC++ K Y+GRGPIQL+ N NY AG A FDGL +PETV+ D V+SFKTALWYWM++V +NQGFG TIR ING EC G N VQ RV YT+YC++ GV G NL C Sbjct: 69 ADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRPVINQGFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.764e-60 Identity = 115/205 (56.10%), Postives = 139/205 (67.80%), Query Frame = 3 Query: 6 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEIS-KTNPYCTPTP-QYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSAL--NQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 SVA +VTPEFF + QA C KGFYTRDAF++A YP FGRT D+KRE+AAFFAH HET FC++EEI + YC T Q+PC GK YYGRGP+Q++ N NY AG++IGFDGL P+ VAR V++F+TALWYW VH A QGFG TIR ING EC G+N V +RV Y +C++FGVDPG NL C Sbjct: 67 SVASIVTPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIKFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.764e-60 Identity = 115/203 (56.65%), Postives = 138/203 (67.98%), Query Frame = 3 Query: 6 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEISKTN-PYCTPT-PQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 SV +VT FF+GIKNQAP C GK FYTR +F++A SY F R D+KRE+AAFFAHVTHET C++ EI+ + YC Q+PC GK YYGRGP+Q++ N NY AG+ IGFDGL P+ VA+D ISFKTALW+WM VH + QGFG TIR ING EC G+N V RV Y DYC++FGVDPG NL C Sbjct: 86 SVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMNNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 232.646 bits (592), Expect = 1.764e-60 Identity = 114/203 (56.16%), Postives = 138/203 (67.98%), Query Frame = 3 Query: 6 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEISKTN-PYCTPT-PQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 SV +VT FF+GIKNQAP C GK FYTR +F++A SY F D+KRE+AAFFAHVTHET C++ EI+ N YC + Q+PC GK YYGRGP+Q++ N NY AG+ IGFDGL P+ VA+D ISFKTALW+WM VH ++QGFG TIR ING EC G+N V RV Y DYC++FGV PG NL C Sbjct: 83 SVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 230.335 bits (586), Expect = 8.753e-60 Identity = 114/206 (55.34%), Postives = 140/206 (67.96%), Query Frame = 3 Query: 6 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEIS-KTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR----YVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 +V+D+VT EF+DGI +QA A C GK FYTR F+ A+S+YP FG D KRE+AA+FAHVTHET C++EE N YC + QYPC K Y+GRGP+QL+ N NYIDAG+ + FDGLN P+ V RD +ISFKT+LW+W+R YV NQGFG TIR ING EC G N AQ+ RV Y +YC + GV PG NL C Sbjct: 45 TVSDIVTQEFWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYPCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 4.344e-59 Identity = 115/205 (56.10%), Postives = 139/205 (67.80%), Query Frame = 3 Query: 6 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEISKT--NPYCTP--TPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 SV+D+V+ FFDGI QA A+C GK FYTR AF+SA+ P+FG D KRE+AAFFAH++HETT+ C +EE + YC QYPCA GK YYGRGP+QL+ N NY AG+AIGFDGL +PE VA D SFK A+W+WM VHS +NQGFG T + ING EC GQN+ Q DR++ Y YC FGV PG NL C Sbjct: 86 SVSDIVSQAFFDGIIGQAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTNLCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMTNVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGVAPGDNLTC 288
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 2.914e-55 Identity = 104/199 (52.26%), Postives = 132/199 (66.33%), Query Frame = 3 Query: 6 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDTKREVAAFFAHVTHETTDFCFVEEIS-KTNPYCTPTP-QYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 SV +VT FF+GI NQA C GK FYTRD+FI+A +++P F + T+RE+A FAH THET FC++EEI+ + YC QYPCA GK Y+GRGPIQL+ N NY G+++ + L PE V+ + ++F+T LW+WM V LNQGFG TIR ING EC G N V R+R Y DYC + GVDPGPNL C Sbjct: 71 SVGSIVTQAFFNGIINQAGGGCAGKNFYTRDSFINAANTFPNFANSVTRREIATMFAHFTHETGHFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRPVLNQGFGATIRAING-MECNGGNSGAVNARIRYYRDYCGQLGVDPGPNLSC 268
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.959e-43 Identity = 98/235 (41.70%), Postives = 133/235 (56.60%), Query Frame = 3 Query: 9 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGR----TDTKREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 + +++ FD +K++ C+GKGFY+ +AFI+A S+P FG T KRE+AAFFA +HETT +C++ E YCTP+ Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+ALW+WM R+ S+ ++ GFG ING ECG ++VQDR+ Y YC GV PG NL+C Sbjct: 75 LGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDC 309 The following BLAST results are available for this feature:
BLAST of FC872105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872105 ID=FC872105; Name=FC872105; organism=Citrus clementina; type=EST; length=764bpback to top |