FC872105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.395e-41 Identity = 96/235 (40.85%), Postives = 135/235 (57.45%), Query Frame = 3 Query: 9 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRT-DT---KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 ++++++ FD +K++ TC+GK FYT +AFI+A S+ FG T DT KREVAAFFA +HETT +C++ E YC + Q+PCA G+ YYGRGPIQ++ N NY GRAIG + LN+P+ VA + V+SFK+A+W+WM R+ SA ++ G+G ING ECG + A+VQDR+ Y YC GV PG N++C Sbjct: 85 ISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHGSDARVQDRIGFYRRYCSILGVSPGDNIDC 319
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.395e-41 Identity = 98/233 (42.06%), Postives = 128/233 (54.94%), Query Frame = 3 Query: 18 LVTPEFFDGIKNQA-PATCEGKG-FYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 +++ FD + N C+GK FY+ +AFISA S+P FG T KRE+AAF A +HETT +CF+ E YCTP+ Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+A+W+WM R+ S +Q GFG ING ECG + ++VQDR+ Y YC GV PG NL+C Sbjct: 71 VISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDC 303
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 169.088 bits (427), Expect = 2.395e-41 Identity = 99/235 (42.13%), Postives = 129/235 (54.89%), Query Frame = 3 Query: 9 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRT---DT-KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR------YVHSALN---------------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 V+ +V+ FD + ++ C+ KGFYT DAF++A S++ FG T DT KREVAAF A +HETT +CF +E T+ YCTP+ Q+PCA GK YYGRGPIQL+ N NY AGRAIG D L +P+ VA D +SFKTA+W+WM H+ + GFG +NG ECG ++V DR+ Y YC GV G NL+C Sbjct: 77 VSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 311
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.128e-41 Identity = 97/236 (41.10%), Postives = 128/236 (54.24%), Query Frame = 3 Query: 6 SVADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR------YVHSALN---------------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 SV+ +++ FD + ++ C+ KGFYT DAF++A +++P FG T + KR+VAAF A +HETT +CF +E YCTP+ Q+PCA GK YYGRGPIQL+ N NY AGRAIG D L +P+ VA D +SFKTALW+WM H+ + GFG ING ECG ++V DR+ Y YC GV G NL+C Sbjct: 24 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDC 259
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.085e-41 Identity = 97/236 (41.10%), Postives = 131/236 (55.51%), Query Frame = 3 Query: 6 SVADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 SV+ +V+ FD + ++ C+ KGFYT DAF++A +++P FG T + KREVAAF A +HETT +CF +E ++ YCTP+ Q+PCA GK YYGRGPIQL+ N NY AGRAIG D L +P+ VA D + FKTA+W+WM ++ S ++ GFG ING ECG ++V DR+ Y YC GV G NL+C Sbjct: 24 SVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 259
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.335e-41 Identity = 96/235 (40.85%), Postives = 127/235 (54.04%), Query Frame = 3 Query: 9 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR------YVHSALN---------------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 V+ +V+ FD + ++ C+ KGFYT DAF++A ++P FG T + KREVAAF A +HETT +CF +E T+ YCTP+ Q+PCA GK YYGRGPIQL+ N NY AGRAIG D L +P+ VA D +SFKTA+W+WM H+ + GFG +NG ECG ++V DR+ Y YC V G NL+C Sbjct: 80 VSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILRVGYGNNLDC 314
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 9.100e-41 Identity = 96/233 (41.20%), Postives = 128/233 (54.94%), Query Frame = 3 Query: 18 LVTPEFFDGIKNQA-PATCEGKG-FYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 +++ FD + N C+GK FY+ +AF++A S+P FG T KRE+AAF A +HETT +CF+ E YCTP+ Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+A+W+WM R+ S +Q GFG ING ECG + ++VQDR+ Y YC GV PG NL+C Sbjct: 75 VISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDC 307
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.516e-40 Identity = 92/235 (39.15%), Postives = 128/235 (54.47%), Query Frame = 3 Query: 9 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALN------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 + +++ FD +K++ C KGFYT DAF++A S+P FG T + KRE+AAF +HETT +CF++E + ++ YC P+P+YPCA GK YYGRGP+QL+ N NY G A+ + L +P+ VA DRV+SFKTALW+WM R+ SA + G+G +NG ECG QV DR+ + YC GV G NL+C Sbjct: 2 IEKIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDC 236
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 4.516e-40 Identity = 95/236 (40.25%), Postives = 130/236 (55.08%), Query Frame = 3 Query: 6 SVADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEF---GRTDTK-REVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR------YVHSALN---------------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 +++ L++ + F+ +K++ C+GK FYT DAF+SA ++P F G T TK RE+AAF +HETT +CF+ E + YC + ++PCA+GK YYGRGPIQ++ N NY GRAIG D LN+P+ VA D VISFKTALW+WM H + G+G ING ECG ++VQDR+ Y YC FG+ G NL+C Sbjct: 67 TLSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLRE-QNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDC 301
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.241e-39 Identity = 91/237 (38.40%), Postives = 128/237 (54.01%), Query Frame = 3 Query: 3 DSVADLVTPEFFDGIK-NQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALN------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 D V +V + F+ + ++ C +GFYT +AF++A +++P FG T KREVAAF +HETT +CF +E + + YC P+P++PCA G+ YYGRGPIQL+ N NY AGRAIG D L++P+ VA D +SFKTALW+WM R+ S + G+G +NG ECG +V +R+ Y YC FG+ G NL+C Sbjct: 87 DGVGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDC 323 The following BLAST results are available for this feature:
BLAST of FC872105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872105 ID=FC872105; Name=FC872105; organism=Citrus clementina; type=EST; length=764bpback to top |