FC872105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 5.713e-35 Identity = 96/238 (40.34%), Postives = 121/238 (50.84%), Query Frame = 3 Query: 9 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEF----GRTDT-KREVAAFFAHVTHETTD-------------FCFVEEISKTN--PYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 VA +V+ FD + ++ A C FYT DAF++A S++P F G DT KREVAAF A +HETT +CF EE YC + Q+PCA GK YYGRGPIQL+ N NY AG+AIG D L P+ VA D +SF TA W+WM ++ SA +Q G+G ING ECG +V DR+ Y YC GV NL+C Sbjct: 81 VASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSYDANLDC 318
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.316e-34 Identity = 91/223 (40.81%), Postives = 117/223 (52.47%), Query Frame = 3 Query: 6 SVADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRT--DT--KREVAAFFAHVTHETTDFCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALN------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 +V +VT + FD +KN+ A C FYT DAFI+A +S+P FG T DT K+E+AAFF +HETT + YC NG YYGRGPIQLTG NY AG+AI D +N+P+ VA D +SFKTA+W+WM R+ SA + G+G ING ECG A+V+DR+ Y V PG NL+C Sbjct: 25 NVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTLSPDGPYAGGYCFLREGNQMGNG--YYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDC 245
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.250e-34 Identity = 91/222 (40.99%), Postives = 114/222 (51.35%), Query Frame = 3 Query: 9 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRT--DTKR--EVAAFFAHVTHETTDFCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 + +VT + F+ +KN+ C GFYT DAFI+A +S+P FG T DT R E+AAFF +HETT E T YC YYGRGPIQLT NY AG AIG + +N+P+ VA D ISFKTA+W+WM R+ SA +Q G+G ING ECG V+DR+ Y YC V PG NL+C Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE-PFTGGYCFVRQN---DQSDRYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDC 244
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.400e-33 Identity = 92/236 (38.98%), Postives = 121/236 (51.27%), Query Frame = 3 Query: 9 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRTD-----TKREVAAFFAHVTHETTD------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALN------QGFGETIRKINGPAECG-GQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 V ++T F+ + N+ + C +GFYT DAFI+A +S+P FG + +RE+AAFF +HETT +CF EEI+K T P YYGRGPIQLTG NY AG A+G D + +P+ V+ D V+SFKTA+W+WM R+ SA + G+G ING ECG GQN A V DR+ Y YC G G NL+C Sbjct: 32 VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGSSDQFQWGYCFKEEINKA----TSPP---------YYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANV-DRIGYYKRYCDMLGAGYGSNLDC 253
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 3.135e-33 Identity = 88/236 (37.29%), Postives = 116/236 (49.15%), Query Frame = 3 Query: 9 VADLVTPEFFDGI-KNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR------YVHSALN---------------QGFGETIRKINGPAECG-GQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 ++D++ FD + K + A C GFYT +AFISA +P+FG T KRE+AAF +HETT +C+++EI+ PYC P+ Y C GK Y GRGPIQL+ N NY G + L PE V D VISFKTA+W+WM+ H+ + G+G ING ECG G A +DR+ Y YC G G NL+C Sbjct: 89 LSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDC 323
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.094e-33 Identity = 88/229 (38.43%), Postives = 118/229 (51.53%), Query Frame = 3 Query: 9 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRT---DT-KREVAAFFAHVTHETTD------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRY--------------------VHSALNQ--GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 VA +VT + F+ + ++ A C +GFY AF++A ++P F T DT KREVAAF A +H T+ +C+ E T+ +C P ++PCA GK Y+ RGP+Q+ N NY AG AIG D L +PE VA D ++FKTALW WM SA + G+G T + G +C G N DRV Y YC GV GPNL+C Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDC 323
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.094e-33 Identity = 88/229 (38.43%), Postives = 118/229 (51.53%), Query Frame = 3 Query: 9 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRT---DT-KREVAAFFAHVTHETTD------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRY--------------------VHSALNQ--GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 VA +VT + F+ + ++ A C +GFY AF++A ++P F T DT KREVAAF A +H T+ +C+ E T+ +C P ++PCA GK Y+ RGP+Q+ N NY AG AIG D L +PE VA D ++FKTALW WM SA + G+G T + G +C G N DRV Y YC GV GPNL+C Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDC 323
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.654e-32 Identity = 88/222 (39.64%), Postives = 111/222 (50.00%), Query Frame = 3 Query: 9 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGR----TDTKREVAAFFAHVTHETTDFCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 + +VT + F+ +KN+ C GFYT DAFI+A +S+P FG T ++E+AAFF +HETT E T YC YYGRGPIQLT NY AG AI D +N+P+ VA D ISFKTA+W+WM + SA +Q G G ING ECG A V+DR+ Y YC V PG NL+C Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE-PFTGGYCFVRQN---DQSDRYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDC 244
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.537e-31 Identity = 82/225 (36.44%), Postives = 108/225 (48.00%), Query Frame = 3 Query: 45 IKNQAPATCEGKGFYTRDAFISALSSYPEFGRT---DT-KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQ--YPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR----------------------YVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 + N+ +C GKGFYT DA+ A YP FG T DT KRE+AAFFA + ET+ +C V E++ + YC P + YPC YYGRGP+QL N NY + G +G + L+ PE VA D V+SF+ ALW+WM + + GFG I EC + + Q+R+ Y YC VDPG NL C Sbjct: 76 LPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVAD--YYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYC 298
BLAST of FC872105 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.325e-28 Identity = 84/234 (35.90%), Postives = 115/234 (49.15%), Query Frame = 3 Query: 6 SVADLVTPEFFDGIKN-QAPATCEGKGFYTRDAFISALSSYPEFGRT--DT--KREVAAFFAHVTHETTD---------FCFVEEISKTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGF--DGLNSPETVARDRVISFKTALWYWMRY-------------------VHSALNQ--GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 596 + +VT E F+ + + + C KGFYT DAFI+A +S+P FG T DT K+E+AAFF +HET +CFV +I +++ Y YGRGPIQLT NY AG+ IG D +N+P+ VA D +ISF+TA+W+WM +A N+ G+G ING EC V+ R+ Y YC V G NL+C Sbjct: 26 NAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGGSAGTFTGGYCFVRQIDQSDRY---------------YGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDC 244 The following BLAST results are available for this feature:
BLAST of FC872105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872105 ID=FC872105; Name=FC872105; organism=Citrus clementina; type=EST; length=764bpback to top |