FC872839
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872839 vs. ExPASy Swiss-Prot
Match: DCAF8_PONAB (DDB1- and CUL4-associated factor 8 OS=Pongo abelii GN=DCAF8 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.797e-55 Identity = 121/297 (40.74%), Postives = 177/297 (59.60%), Query Frame = 1 Query: 4 GHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRM-DTKRLGKHQGRVYKLAVEPGSPYIIYSCGENGFVQHFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNIHITGLAYSNT-SELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMRGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFATCGIEKTVKLWAP 879 GH N+FQ + +P + D + + DGQVR+ ++ +TKR+ +H+G +KLA+EP SP S GE+ V DLR D A++L +K+ + L I ++P N + FAVGG D++ R+YD RK ++ + FCP HL+ G++ +IT L YS+ +ELL SYNDE +YLF + G + KR Y GHRN+ TVKGVNF+GP E+V+ GSDCGH+F+W+K ++++ M GD+ VVN LEPHPH+P+ AT G++ VK+WAP Sbjct: 234 GHKSNVFQAKFLPNSGDSTLAMRARDGQVRVAELSATQCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVV-------TKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKI---DENENNGVLKKFCPHHLVNGESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYV--------KR-----YKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAP 507
BLAST of FC872839 vs. ExPASy Swiss-Prot
Match: DCAF8_MOUSE (DDB1- and CUL4-associated factor 8 OS=Mus musculus GN=Dcaf8 PE=1 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.959e-55 Identity = 121/297 (40.74%), Postives = 176/297 (59.26%), Query Frame = 1 Query: 4 GHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRM-DTKRLGKHQGRVYKLAVEPGSPYIIYSCGENGFVQHFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG-KNNIHITGLAYSNT-SELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMRGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFATCGIEKTVKLWAP 879 GH N+FQ + +P + D + + DGQVR+ ++ +TKR+ +H+G +KLA+EP SP S GE+ V DLR D A++L +K+ + L I ++P N + FAVGG D+Y R+YD RK ++ + FCP HL+ ++ +IT L YS+ +ELL SYNDE +YLF + G + KR Y GHRN+ TVKGVNF+GP E+V+ GSDCGH+F+W+K ++++ M GD+ VVN LEPHPH+P+ AT G++ VK+WAP Sbjct: 228 GHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSATQCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVV-------TKEKEKKVGLYTIYVNPANTHQFAVGGRDQYVRIYDQRKI---DENENNGVLKKFCPHHLVNSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYI--------KR-----YKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAP 501
BLAST of FC872839 vs. ExPASy Swiss-Prot
Match: DCAF8_RAT (DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus GN=Dcaf8 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.443e-54 Identity = 120/297 (40.40%), Postives = 176/297 (59.26%), Query Frame = 1 Query: 4 GHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRM-DTKRLGKHQGRVYKLAVEPGSPYIIYSCGENGFVQHFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG-KNNIHITGLAYSNT-SELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMRGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFATCGIEKTVKLWAP 879 GH N+FQ + +P + D + + DGQVR+ ++ +TKR+ +H+G +KLA+EP SP S GE+ V DLR D A++L +K+ + L I ++P N + FAVGG D++ R+YD RK ++ + FCP HL+ ++ +IT L YS+ +ELL SYNDE +YLF + G + KR Y GHRN+ TVKGVNF+GP E+V+ GSDCGH+F+W+K ++++ M GD+ VVN LEPHPH+P+ AT G++ VK+WAP Sbjct: 228 GHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSATQCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVV-------TKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKI---DENENNGVLKKFCPHHLVNSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYI--------KR-----YKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAP 501
BLAST of FC872839 vs. ExPASy Swiss-Prot
Match: DCAF8_HUMAN (DDB1- and CUL4-associated factor 8 OS=Homo sapiens GN=DCAF8 PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.885e-54 Identity = 120/297 (40.40%), Postives = 176/297 (59.26%), Query Frame = 1 Query: 4 GHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRM-DTKRLGKHQGRVYKLAVEPGSPYIIYSCGENGFVQHFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG-KNNIHITGLAYSNT-SELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMRGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFATCGIEKTVKLWAP 879 GH N+FQ + +P + D + + DGQVR+ ++ +TKR+ +H+G +KLA+EP SP S GE+ V DLR D A++L +K+ + L I ++P N + FAVGG D++ R+YD RK ++ + FCP HL+ ++ +IT L YS+ +ELL SYNDE +YLF + G + KR Y GHRN+ TVKGVNF+GP E+V+ GSDCGH+F+W+K ++++ M GD+ VVN LEPHPH+P+ AT G++ VK+WAP Sbjct: 234 GHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSATQCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVV-------TKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKI---DENENNGVLKKFCPHHLVNSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYV--------KR-----YKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAP 507
BLAST of FC872839 vs. ExPASy Swiss-Prot
Match: DC8L1_XENLA (DDB1- and CUL4-associated factor 8-like protein 1 OS=Xenopus laevis GN=dcaf8l1 PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 7.161e-54 Identity = 122/297 (41.08%), Postives = 175/297 (58.92%), Query Frame = 1 Query: 4 GHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRM-DTKRLGKHQGRVYKLAVEPGSPYIIYSCGENGFVQHFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNIHITGLAYSNT-SELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMRGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFATCGIEKTVKLWAP 879 GH N+FQ + +P + D + + DGQVR+ ++ +TKR+ +H+G +KLA+EP SP S GE+ V DLR D A+RL +K+ + + L I ++P N FAVGG D++ R+YD RK + ++ + FCP HL+ + +IT L YS+ SELL SYNDE +YLF + G + KR Y GHRN+ TVKGVNF+GP E+V+ GSDCGH+F+W+K ++V+ M GD+ VVN LEPHPH+P+ AT G++ VK+W P Sbjct: 237 GHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSATHCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASRLVV-------TKEKESKVGLYTIYVNPANTYQFAVGGRDQFVRIYDQRKIN---ENVNNGVLKKFCPHHLVTSEAKANITCLVYSHDGSELLASYNDEDIYLFNSSHSDGAEYI--------KR-----YKGHRNNATVKGVNFYGPRSEFVVSGSDCGHIFLWEKSSCQIVQFMDGDKGGVVNCLEPHPHLPVLATSGLDYDVKIWLP 510
BLAST of FC872839 vs. ExPASy Swiss-Prot
Match: DC8L1_XENTR (DDB1- and CUL4-associated factor 8-like protein 1 OS=Xenopus tropicalis GN=dcaf8l1 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 1.034e-52 Identity = 121/297 (40.74%), Postives = 173/297 (58.25%), Query Frame = 1 Query: 4 GHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRM-DTKRLGKHQGRVYKLAVEPGSPYIIYSCGENGFVQHFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNIHITGLAYSNT-SELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMRGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFATCGIEKTVKLWAP 879 GH N+FQ + +P + D + + DGQVR+ ++ +TKR+ +H+G +KLA+E SP S GE+ V DLR D A+RL +K+ + L I ++P N FAVGG D++ R+YD RK + ++ + FCP HL+ + +IT L YS+ SELL SYNDE +YLF + G + KR Y GHRN+ TVKGVNF+GP E+V+ GSDCGH+F+W+K ++V+ M GD+ VVN LEPHPH+P+ AT G++ VK+W P Sbjct: 240 GHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSATHCCKNTKRVAQHKGASHKLALERDSPCTFLSAGEDAVVFTIDLRQDRPASRLVV-------TKEKEKKVGLYTIYVNPANTYQFAVGGRDQFVRIYDQRKIN---ENVNNGVLKKFCPHHLVTSEAKANITCLVYSHDGSELLASYNDEDIYLFNSSHSDGAEYI--------KR-----YKGHRNNATVKGVNFYGPRSEFVVSGSDCGHIFLWEKSSCQIVQFMDGDKGGVVNCLEPHPHLPVLATSGLDYDVKIWLP 513
BLAST of FC872839 vs. ExPASy Swiss-Prot
Match: DC8L2_HUMAN (DDB1- and CUL4-associated factor 8-like protein 2 OS=Homo sapiens GN=DCAF8L2 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.636e-48 Identity = 109/296 (36.82%), Postives = 165/296 (55.74%), Query Frame = 1 Query: 4 GHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMD-TKRLGKHQGRVYKLAVEPGSPYIIYSCGENGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKN-NIHITGLAYSNT-SELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMRGSDCGHLFIWKKKGGKLVRLMVGDRH-VVNQLEPHPHIPMFATCGIEKTVKLWAP 879 GH +N+FQ + +P D + + DGQVR+ ++ + TK + +H+G +KLA+EP SPY + GE+ V DLR D + EN K+ + L I ++P N FAVGG D++ R+YD RK ++ + F P HL+ + +IT + YS+ +ELL SYND+ +YLF + G KR + GHRN+ TVKGVNF+GP E+V+ GSDCGH+F W+K ++++ + G R +N LEPHP++P+ A G++ VK+W P Sbjct: 240 GHTNNVFQAKFLPNCGDSTLAMCARDGQVRVAELINASYFNNTKCVAQHRGPAHKLALEPDSPYKFLTSGEDAVVFTIDLRQDRPASKVVVTR--ENDKK----VGLYTITVNPANTYQFAVGGQDQFVRIYDQRKI---DKKENNGVLKKFTPHHLVNCDFPTNITCVVYSHDGTELLASYNDDDIYLFNSSHSDGAQ--------YSKR-----FKGHRNNTTVKGVNFYGPRSEFVVSGSDCGHIFFWEKSSCQIIQFLKGSREGTINCLEPHPYLPVLACSGLDHDVKIWTP 513
BLAST of FC872839 vs. ExPASy Swiss-Prot
Match: DC8L1_HUMAN (DDB1- and CUL4-associated factor 8-like protein 1 OS=Homo sapiens GN=DCAF8L1 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 5.872e-48 Identity = 111/296 (37.50%), Postives = 167/296 (56.42%), Query Frame = 1 Query: 4 GHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMD-TKRLGKHQGRVYKLAVEPGSPYIIYSCGENGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKN-NIHITGLAYSNT-SELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMRGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFATCGIEKTVKLWAP 879 GH N+ Q + P D + DGQVR+ ++ + TKR+ KH+G ++LA+EP SPY + GE+ V DLR D + EN K+ + L I ++P N FAVGG D++ R+YD R+ ++ + F P HL+ + +IT + YS+ +ELL SYNDE +YLF ++ G + KR Y GHRN+ T+K VNF+GP E+V+ GSDCGH+F W+K ++++ M GDR +VN LEPHP++P+ AT G+++ V++W P Sbjct: 237 GHDINVIQAKFFPNCGDSTLAMCGHDGQVRVAELINASYCENTKRVAKHRGPAHELALEPDSPYKFLTSGEDAVVFTIDLRQDRPASKVVVTR--ENDKK----VGLYTISMNPANIYQFAVGGHDQFVRIYDQRRI---DKKENNGVLKKFTPHHLVYCDFPTNITCVVYSHDGTELLASYNDEDIYLFNSSLSDGAQYV--------KR-----YKGHRNNDTIKCVNFYGPRSEFVVSGSDCGHVFFWEKSSSQIIQFMEGDRGDIVNCLEPHPYLPVLATSGLDQHVRIWTP 510
BLAST of FC872839 vs. ExPASy Swiss-Prot
Match: DCAF6_MOUSE (DDB1- and CUL4-associated factor 6 OS=Mus musculus GN=Dcaf6 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.968e-19 Identity = 65/196 (33.16%), Postives = 96/196 (48.98%), Query Frame = 1 Query: 4 GHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPYIIYSCGENGFVQHFDLR-SDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYD-----IRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYS-NTSELLISYNDELVYLFE 567 GH NIF + +P TDD++I++ S DG + I +D + + + H G Y++ P PY SCGE+G V+ FD R S T+ N ++ S + I P P Y AVG SD R+YD R Y+ + V F P HL K + +T L YS + E+L+SY+ + +YLF+ Sbjct: 92 GHRANIFSAKFLPCTDDKQIVSCSGDGVIFYTNIEQDAETNRQCQFTCHYGTTYEIMTVPNDPYTFLSCGEDGTVRWFDTRIKTSCTKEDCKDDILINCRRAATS-----VAICPPVPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLSNK-SCRVTSLCYSEDGQEILVSYSSDYIYLFD 281 HSP 2 Score: 91.2781 bits (225), Expect = 8.270e-18 Identity = 41/82 (50.00%), Postives = 58/82 (70.73%), Query Frame = 1 Query: 640 VYSGHRNSQT-VKGVNFFGPNDEYVMRGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPM 882 VY GHRNS+T +K NF+G N +VM GSDCGH+FIW + + + L+ D HVVN L+PHP P+ A+ GI+ +K+W+P+ Sbjct: 728 VYKGHRNSRTMIKEANFWGAN--FVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQPHPFDPILASSGIDYDIKIWSPL 807
BLAST of FC872839 vs. ExPASy Swiss-Prot
Match: DCAF6_PONAB (DDB1- and CUL4-associated factor 6 OS=Pongo abelii GN=DCAF6 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.276e-18 Identity = 63/196 (32.14%), Postives = 96/196 (48.98%), Query Frame = 1 Query: 4 GHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPYIIYSCGENGFVQHFDLR-SDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYD-----IRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYS-NTSELLISYNDELVYLFE 567 GH NIF + +P T+D++I++ S DG + + +D + + + H G Y++ P PY SCGE+G V+ FD R S T+ N ++ S + I P P Y AVG SD R+YD R Y+ + V F P HL K + +T L YS + E+L+SY+ + +YLF+ Sbjct: 92 GHRANIFSAKFLPCTNDKQIVSCSGDGVIFYTNVEQDAETNRQCQFTCHYGTTYEIMTVPNDPYTFLSCGEDGTVRWFDTRIKTSCTKEDCKDDILINCRRAATS-----VAICPPIPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNNK-SCRVTSLCYSEDGQEILVSYSSDYIYLFD 281 HSP 2 Score: 91.2781 bits (225), Expect = 8.270e-18 Identity = 41/82 (50.00%), Postives = 58/82 (70.73%), Query Frame = 1 Query: 640 VYSGHRNSQT-VKGVNFFGPNDEYVMRGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPM 882 VY GHRNS+T +K NF+G N +VM GSDCGH+FIW + + + L+ D HVVN L+PHP P+ A+ GI+ +K+W+P+ Sbjct: 712 VYKGHRNSRTMIKEANFWGAN--FVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQPHPFDPILASSGIDYDIKIWSPL 791 The following BLAST results are available for this feature:
BLAST of FC872839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872839 ID=FC872839; Name=FC872839; organism=Citrus clementina; type=EST; length=902bpback to top |