FC872973
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: MYRS1_ARATH (Myrcene/ocimene synthase 1, chloroplastic OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.684e-24 Identity = 65/230 (28.26%), Postives = 113/230 (49.13%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPP-IVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECL--SPNPFSASFTRASLNTARMVPLMYGYDDNQRLP---RLEEYVKSLLFDNLP 674 WD+ +++LPE M++CF + + N I+ ++ + N + L+K+W + A+L EAKW+ SGH P EEY++N +S ++ + + + + +V +++ RL +DL ++ DE G+ I YM E + + A+ H I+D W +N E + S + F +N ARM MY Y D P ++ + V SLLF+ +P Sbjct: 361 WDINRLDELPEYMRLCFLVIYNEVNSIACEILRTKNINVIPFLKKSWTDVSKAYLVEAKWYKSGHKPNLEEYMQNARISISSPTIFVHFYCVFSDQLSIQVLETLSQHQQNVVRCSSSVFRLANDLVTSPDELARGDVCKSIQCYMSE-TGASEDKARSHVRQMINDLWDEMNYEKMAHSSSILHHDFMETVINLARMSQCMYQYGDGHGSPEKAKIVDRVMSLLFNPIP 589
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: TPSDB_ABIGR (Limonene/alpha-pinene synthase, chloroplastic OS=Abies grandis GN=ag11 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.093e-21 Identity = 67/205 (32.68%), Postives = 99/205 (48.29%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFS-ASFTRASLNTARMVPLMYGYDD 614 WDL + LPE MK + L NE++ + K G + ++ +R A+ S ++F+ EAKW +SG++P EEYLKNG VSS + + ++ ID +++LRL D K + G + S I YM +H T EDA H ISDA + LN E L P+ S S + + + R +Y Y D Sbjct: 410 WDLSETKCLPEYMKAVYMDLYQCLNELAQEAEKTQGRDTLNYIRNAYESHFDSFMHEAKWISSGYLPTFEEYLKNGKVSSGSRTATLQPILTLDVPLPNYILQEIDYPSRFNDLASSLLRLRGDTRCYKADRARGEEASAISCYMKDHPGSTEEDALNHINVMISDAIRELNWELLRPDSKSPISSKKHAFDITRAFHHLYKYRD 614
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.314e-20 Identity = 62/204 (30.39%), Postives = 95/204 (46.57%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMYGYDD 614 WD+ I+++PE MK +KAL D+ E+ V + V + A L ++L EAKW + P EE+ N + + +T ET + S+P I+ + I R DD+ K +++ +D S I YM E+ VTA++A + AWK LNQE L P SLN AR++ ++Y D Sbjct: 329 WDIKCIDEIPEYMKPSYKALLDVYEEMVQLVAEHGRQYRVEYAKNAMIRLAQSYLVEAKWTLQNYKPSFEEFKANALPTCGYAMLAITSFVGMGDIVTPETFKWAASDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEY-GVTAQEAYDVFNKHVESAWKDLNQEFLKPTEMPTEVLNRSLNLARVMDVLYREGD 531
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: SSS_SALOF ((+)-sabinene synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.946e-20 Identity = 60/201 (29.85%), Postives = 96/201 (47.76%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQ-ECLSPNPFSASFTRASLNTARMVPLMY 602 WD I QLP M++C+ AL + +E + + K+ +N + L+++W SL +L EA W+ +G+ P EEYL N +S I + + I+ TILRL DDLG+++ E + G+ I YM + + + +A +H I +AWK +N S PF+ A+ N AR +Y Sbjct: 365 WDNKSISQLPYYMQVCYLALYNFVSERAYDILKDQHFNSIPYLQRSWVSLVEGYLKEAYWYYNGYKPSLEEYLNNAKISISAPTIISQLYFTLANSIDETAIESLYQYHNILYLSGTILRLADDLGTSQHELERGDVPKAIQCYMND-TNASEREAVEHVKFLIREAWKEMNTVTTASDCPFTDDLVAAAANLARAAQFIY 564
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: TPSD1_ABIGR (Alpha-bisabolene synthase OS=Abies grandis GN=ag1 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.154e-20 Identity = 64/229 (27.95%), Postives = 104/229 (45.41%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVS-SXXXXXXXXXXXXXXXXITSETVRLID--SNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMYGYDDNQRLPRLE--EYVKSLLFDNLP 674 WDL E LP+ MK+C++ DI +E++ + KE G V RK W + EA+W A+ ++P +EY+KNGI S ++ E + +D + + I RL DD + K E G S I YM +H + T E+A H + A K L +E L P+ + + R+ +++ D + +LE +++K L + LP Sbjct: 588 WDLSFTENLPDYMKLCYQIYYDIVHEVAWEAEKEQGRELVSFFRKGWEDYLLGYYEEAEWLAAEYVPTLDEYIKNGITSIGQRILLLSGVLIMDGQLLSQEALEKVDYPGRRVLTELNSLISRLADDTKTYKAEKARGELASSIECYMKDHPECTEEEALDHIYSILEPAVKELTREFLKPDDVPFACKKMLFEETRVTMVIFKDGDGFGVSKLEVKDHIKECLIEPLP 816
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.154e-20 Identity = 62/204 (30.39%), Postives = 95/204 (46.57%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMYGYDD 614 WD+ + QLP MKI +KAL ++ E+ + + V +KA L A+L EAKW + P EE+ N + +S IT ET + S+P I+ + I R DD+ K ++ +D S I YM ++ VTA++A I +WK +N+E L P SLN AR++ ++Y D Sbjct: 330 WDIKCMNQLPNYMKISYKALLNVYEEMEQLLANQGRQYRVEYAKKAMIRLVQAYLLEAKWTHQNYKPTFEEFRDNALPTSGYAMLAITAFVGMGEVITPETFKWAASDPKIIKASTIICRFMDDIAEHKFNHRREDDCSAIECYMKQY-GVTAQEAYNEFNKHIESSWKDVNEEFLKPTEMPTPVLCRSLNLARVMDVLYREGD 532
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: TPSD6_ABIGR (Camphene synthase, chloroplastic OS=Abies grandis GN=ag6 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.731e-20 Identity = 65/220 (29.55%), Postives = 102/220 (46.36%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSP-NPFSASFTRASLNTARMVPLMYGYDDNQRLPRLEEYVKSLL 659 WD +E LPE MK + + NE++ K G + ++ R+AW + ++++ EAKW A+G++P EEYL+NG VSS ++ +D + + ILRL D K + G + S I YM ++ +T EDA H I DA + LN E L P N + + + + +R+ Y Y D +E KSL+ Sbjct: 391 WDPSAMECLPEYMKGVYMMVYHTVNEMARVAEKAQGRDTLNYARQAWEACFDSYMQEAKWIATGYLPTFEEYLENGKVSSAHRPCALQPILTLDIPFPDHILKEVDFPSKLNDLICIILRLRGDTRCYKADRARGEEASSISCYMKDNPGLTEEDALNHINFMIRDAIRELNWELLKPDNSVPITSKKHAFDISRVWHHGYRYRDGYSFANVE--TKSLV 608
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: TPSD1_PINTA (Levopimaradiene synthase, chloroplastic OS=Pinus taeda GN=LPS PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.731e-20 Identity = 61/223 (27.35%), Postives = 105/223 (47.09%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMYGYDDNQRLP---RLEEYVKSLLF 662 WDL ++Q+P+ MKICFK + NEI+ + K G + + ++K W A+ EA+W A ++P +EY+ N VS +T + + I + + + RL +D + + E G S + YM +H +++ E+A KH + +A LN+E ++ + R TAR++ L Y D L ++E+VK+ LF Sbjct: 624 WDLSLVDQMPQDMKICFKGFYNTFNEIAEEGRKRQGRDVLSYIQKVWEVQLEAYTKEAEWSAVRYVPSYDEYIGNASVSIALGTVVLISALFTGEILTDDILSKIGRDSRFLYLMGLTGRLVNDTKTYQAERGQGEVASAVQCYMKDHPEISEEEALKHVYTIMDNALDELNREFVNNRDVPDTCRRLVFETARIMQLFYMDGDGLTLSHNMEIKEHVKNCLF 846
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: TPSD3_ABIGR (Pinene synthase, chloroplastic OS=Abies grandis GN=ag3 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.792e-20 Identity = 66/229 (28.82%), Postives = 105/229 (45.85%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPN---PFSASFTRASLNTARMVPLMYGYDDNQRLPRLE--EYVKSLLFDNLP 674 WD I+ LPE MK + A+ D NE++ + + G + + R+AW + ++++ EA+W A+G++P +EY +NG VS ++ +D + ILRL D K + G + S I YM ++ V+ EDA H ISD K LN E L P+ P SA + + + AR Y Y D + +E V L +++P Sbjct: 401 WDPSSIDCLPEYMKGVYIAVYDTVNEMAREAEEAQGRDTLTYAREAWEAYIDSYMQEARWIATGYLPSFDEYYENGKVSCGHRISALQPILTMDIPFPDHILKEVDFPSKLNDLACAILRLRGDTRCYKADRARGEEASSISCYMKDNPGVSEEDALDHINAMISDVIKGLNWELLKPDINVPISAK--KHAFDIARAFHYGYKYRDGYSVANVETKSLVTRTLLESVP 627
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.792e-20 Identity = 60/204 (29.41%), Postives = 95/204 (46.57%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMYGYDD 614 WD+ I++LPE MK +KAL D+ E+ V K V + A L ++L EA+W + P EE+ N + + +T ET + ++P I+ + I R DD+ K +++ +D S I YM E+ VTA++A + AWK +N+E L P SLN AR++ ++Y D Sbjct: 329 WDIKCIDELPEYMKPSYKALLDVYEEMEQLVAKHGRQYRVEYAKNAMIRLAQSYLVEARWTLQNYKPSFEEFKANALPTCGYAMLAITSFVGMGDIVTPETFKWAANDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEY-GVTAQEAYDVFNKHVESAWKDVNKEFLKPTEMPTEVLNRSLNLARVMDVLYREGD 531 The following BLAST results are available for this feature:
BLAST of FC872973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872973 ID=FC872973; Name=FC872973; organism=Citrus clementina; type=EST; length=763bpback to top |