FC872973
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: LINS_ARATH (Linalool synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS14 PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 4.443e-72 Identity = 129/219 (58.90%), Postives = 163/219 (74.43%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMYGYDDNQRLPRLEEYVKSLL 659 WD G++ LP+ M++CF+AL+ IT EIS K+YK HG+NP ++LR++W SLC AFL EAKWF SG++P EEY+KNG+VSS +T E V LI+SNP IVSS ATILRLWDDLGSAKDENQDG DGSY+ Y+ E++ T ++A+ H KIS AWKRLN+ECL+P PFS SF++A LN AR VPLMY YDD+QRLP +EY+KSL+ Sbjct: 353 WDHKGLKTLPKYMRVCFEALDMITTEISMKIYKSHGWNPTYALRQSWASLCKAFLVEAKWFNSGYLPTTEEYMKNGVVSSGVHLVMLHAYILLGEELTKEKVELIESNPGIVSSAATILRLWDDLGSAKDENQDGTDGSYVECYLNEYKGSTVDEARTHVAQKISRAWKRLNRECLNPCPFSRSFSKACLNIARTVPLMYSYDDDQRLP--DEYLKSLM 569
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: TPS02_ARATH (Probable terpenoid synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS02 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.466e-30 Identity = 73/229 (31.88%), Postives = 123/229 (53.71%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFS--ASFTRASLNTARMVPLMYGYDDNQRLP---RLEEYVKSLLFDNLP 674 WD+ +E+LP M++CF L + N+I V ++ G N + L++ W L FLTE+KW+ +GH P EEY++NG++SS I+ +T+ N +V S ATILRL +DL ++ +E G+ + YM E + + E+A++H ISD+W +N + + + S F A+ N R+V +Y + D P + +Y++S+LF+ +P Sbjct: 372 WDVNHVERLPNYMRMCFLFLYNEINQIGYDVLRDKGLNVIPYLKQVWTDLFKTFLTESKWYKTGHKPSFEEYMQNGVISSSVPTILLHLFSVLSDHISDQTLTDDSKNHSVVRSCATILRLANDLATSTEEMARGDSPKSVQCYMYETR-ASEEEARRHMQSMISDSWDIINSDLKTAHTSSLPRGFLAAAANLNRVVQCIYRHGDGHGSPEKTKTVDYIQSVLFNPVP 599
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.466e-30 Identity = 74/226 (32.74%), Postives = 120/226 (53.10%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMYGYDDNQRLPRLE--EYVKSLLFDNLP 674 WD+ ++QLP+ MKICF L++ NE++ KE ++ + L+KAW LC +L EAKW+++ + P +EY++N +S IT E + ++ P I+ + I RL DDLG++ DE + G+ I YM E + E A+++ IS WK++N++ + +PFS F +LN ARM +Y + D L E + + SLL +P Sbjct: 369 WDINAMDQLPDYMKICFLTLHNSVNEMALDTMKEQRFHIIKYLKKAWVDLCRYYLVEAKWYSNKYRPSLQEYIENAWISIGAPTILVHAYFFVTNPITKEALDCLEEYPNIIRWSSIIARLADDLGTSTDELKRGDVPKAIQCYMNE-TGASEEGAREYIKYLISATWKKMNKDRAASSPFSHIFIEIALNLARMAQCLYQHGDGHGLGNRETKDRILSLLIQPIP 593
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: SCS_SALOF (1,8-cineole synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.088e-29 Identity = 73/224 (32.59%), Postives = 118/224 (52.68%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMYGYDDN---QRLPRLEEYVKSLLFD 665 WD+ ++QLP M+IC+ AL + NE++ ++ G+N LRKAW L ++L EAKW+ GH P EEY+KN +S I E + IV + TILRL DD+G++ DE + G+ + YM E ++ + E+A++H I WK +N+E ++ + FS F + S N ARM +Y ++ + + + + ++ LLFD Sbjct: 367 WDIESMKQLPPYMQICYLALFNFVNEMAYDTLRDKGFNSTPYLRKAWVDLVESYLIEAKWYYMGHKPSLEEYMKNSWISIGGIPILSHLFFRLTDSIEEEDAESMHKYHDIVRASCTILRLADDMGTSLDEVERGDVPKSVQCYMNE-KNASEEEAREHVRSLIDQTWKMMNKEMMT-SSFSKYFVQVSANLARMAQWIYQHESDGFGMQHSLVNKMLRGLLFD 588
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: RLC1_CITLI ((R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.954e-27 Identity = 77/230 (33.48%), Postives = 117/230 (50.87%), Query Frame = 3 Query: 3 WDLG-GIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECL-SPNPFSASFTRASLNTARMVPLMYGYDDNQRLPRLE--EYVKSLLFDNLPTQ 680 WD+ ++ LP MK+CF AL + NE + V K+ ++ + S++ AW L A+L EAKW+ S + PK EEYL+NG+VS I + + ++SNP IV + I RL DDLG++ DE Q G+ I YM E + E A++H D + WK++N +P + + T LN RM MY + D + E + +LLF +P + Sbjct: 364 WDINYALKHLPGYMKMCFLALYNFVNEFAYYVLKQQDFDLLLSIKNAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFLESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHE-TGASEEVARQHIKDMMRQMWKKVNAYTADKDSPLTGTTTEFLLNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQPIPLE 592
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: MYRS2_ARATH (Myrcene/ocimene synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS24 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.072e-25 Identity = 71/232 (30.60%), Postives = 113/232 (48.71%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVR-LIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQE----CLSPNPFSASFTRASLNTARMVPLMYGYDDNQRLP---RLEEYVKSLLFDNLP 674 WD+ +++LPE MK+CF L + N + V K + + +K+W LC A+L EAKW+ G+ P EEY++N +S I+ + + L+ +V AT+LRL +DL ++ DE G+ + YM E V+ E+A+ H IS W +N E S + S F ++N ARM MY + D P ++ + V++LL D +P Sbjct: 366 WDINRLDELPEYMKLCFLTLFNEINAMGCDVLKCKNIDVIPYFKKSWADLCKAYLVEAKWYKGGYKPSVEEYMQNAWISISAPTMLIHFYCAFSGQISVQILESLVQQQQDVVRCSATVLRLANDLATSPDELARGDVLKSVQCYMHE-TGVSEEEARTHVQQMISHTWDEMNYEARTAARSSSLLSRRFVETAMNLARMSQCMYQHGDGHGCPDKAKIVDRVQTLLVDPIP 596
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: OCIS_ARATH ((E)-beta-ocimene synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS03 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.074e-25 Identity = 74/228 (32.46%), Postives = 116/228 (50.88%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDS-NPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMYGYDDNQRLP---RLEEYVKSLLFDNLP 674 WD+ +E+LP MK+CF L + N+I V ++ G+N + L+++W +C FL EAKW+ SG+ P EEY++NG +SS ++ +T+ ++ S N +V S ATILRL +DL ++ +E G+ + +M E AE ++ + I AW LN E S F A+ N R+ +Y Y D P + +V+SLL LP Sbjct: 342 WDVNRLEELPNYMKLCFLCLVNEINQIGYFVLRDKGFNVIPYLKESWADMCTTFLKEAKWYKSGYKPNFEEYMQNGWISS----SVPTILLHLFCLLSDQTLDILGSYNHSVVRSSATILRLANDLATSSEELARGDTMKSVQCHMHETGASEAE-SRAYIQGIIGVAWDDLNMEKKSCR-LHQGFLEAAANLGRVAQCVYQYGDGHGCPDKAKTVNHVRSLLVHPLP 563
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: TPS1_CANSA ((-)-limonene synthase, chloroplastic OS=Cannabis sativa GN=TPS1 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.321e-25 Identity = 73/207 (35.27%), Postives = 105/207 (50.72%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVR-LIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAED-AQKHATDKISDAWKRLNQECLSPNP-FSASFTRASLNTARMVPLMYGYDD 614 WDL +++LP+ MK F + TNE++ V +EHG+ + +K LC L EAKWF SG+ P +EY++NG +S +T E + L D +P IV + ILRL DDLG+ DE + G+ I YM H +ED A++H IS++WK +N E + N FS F + N R +Y Y D Sbjct: 395 WDLKELDKLPDYMKTAFYFTYNFTNELAFDVLQEHGFVHIEYFKKLMVELCKHHLQEAKWFYSGYKPTLQEYVENGWLSVGGQVILMHAYFAFTNPVTKEALECLKDGHPNIVRHASIILRLADDLGTLSDELKRGDVPKSIQCYM--HDTGASEDEAREHIKYLISESWKEMNNEDGNINSFFSNEFVQVCQNLGRASQFIYQYGD 599
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: CINS_ARATH (1,8-cineole synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS27 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.641e-24 Identity = 72/231 (31.17%), Postives = 111/231 (48.05%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSN-PPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQE---CLSPNPFSASFTRASLNTARMVPLMYGYDDNQRLP---RLEEYVKSLLFDNLP 674 WD+ + +LPE M++CF L + N I + K + + L+K+W LC +L EAKW+ G+ P EEY++N +S I+ + + + + IV AT+LRL +DLG++ E G+ + YM E + E A+ H ISD W +N E + + S F A++N ARM MY Y D P + + V+SLL D +P Sbjct: 364 WDVNRLGELPEYMRLCFLILYNEINGIGCDILKYKKIDVIPYLKKSWADLCRTYLVEAKWYKRGYKPSLEEYMQNAWISISAPTILIHFYCVFSDQISVQNLETLSQHRQHIVRCSATVLRLANDLGTSPTELARGDVLKSVQCYMHE-TGASEERARDHVHQMISDMWDDMNSETKTACNSSSRSRGFKEAAMNLARMSQCMYQYGDGHGCPEKAKTIDRVQSLLVDPIP 593
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.684e-24 Identity = 69/206 (33.50%), Postives = 103/206 (50.00%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVR-LIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAED-AQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMYGYDD 614 WD I +LP+ MK+ F L + NE++ V +EH + V L+ +W LC +L EAKWF SG+ P ++Y++N +S IT+E + L + + + +LRL DDLG+ DE + G+ I YM H +ED A++H IS+ WK +N E + FS F +A N RM MY + D Sbjct: 389 WDAKTIHELPDYMKLPFFTLFNTVNEMAYDVLEEHNFVTVEYLKNSWAELCRCYLEEAKWFYSGYKPTLKKYIENASLSIGGQIIFVYAFFSLTKSITNEALESLQEGHHAACRQGSLMLRLADDLGTLSDEMKRGDVPKSIQCYM--HDTGASEDEAREHIKFLISEIWKEMNDEDEYNSIFSKEFVQACKNLGRMSLFMYQHGD 592 The following BLAST results are available for this feature:
BLAST of FC872973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872973 ID=FC872973; Name=FC872973; organism=Citrus clementina; type=EST; length=763bpback to top |