FC872973
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: TPSD1_PICAB (Levopimaradiene synthase, chloroplastic OS=Picea abies GN=TPS-LAS PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.148e-19 Identity = 60/223 (26.91%), Postives = 103/223 (46.19%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMYGYDDNQRL---PRLEEYVKSLLF 662 WDL ++++P+ MKICF + NEI+ + K G + + +R W A+ EA+W A+ ++P +EY+ N VS +T + + I + + RL +D + + E G S + YM +H +++ E+A KH + +A LN+E ++ S R TAR++ L Y D L ++E+VK+ LF Sbjct: 633 WDLSLVDRMPQDMKICFMGFYNTFNEIAEEGRKRQGRDVLGYIRNVWEIQLEAYTKEAEWSAARYVPSFDEYIDNASVSIALGTVVLISALFTGEILTDDVLSKIGRGSRFLQLMGLTGRLVNDTKTYEAERGQGEVASAVQCYMKDHPEISEEEALKHVYTVMENALDELNREFVNNREVPDSCRRLVFETARIMQLFYMDGDGLTLSHETEIKEHVKNCLF 855
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: TPSDA_ABIGR (Limonene synthase, chloroplastic OS=Abies grandis GN=ag10 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.500e-19 Identity = 65/205 (31.71%), Postives = 93/205 (45.37%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFS-ASFTRASLNTARMVPLMYGYDD 614 WDL LPE MK + L NE+ + K G + ++ ++ AW +L + F+ EAKW +S ++P EEYLKN VSS + ++ ID ++ILRL D K + G + S I YM +H EDA H ISDA + LN E L P+ S S + + + R +Y Y D Sbjct: 410 WDLSTTRWLPEYMKGVYMDLYQCINEMVEEAEKTQGRDMLNYIQNAWEALFDTFMQEAKWISSSYLPTFEEYLKNAKVSSGSRIATLQPILTLDVPLPDYILQEIDYPSRFNELASSILRLRGDTRCYKADRARGEEASAISCYMKDHPGSIEEDALNHINAMISDAIRELNWELLRPDSKSPISSKKHAFDITRAFHHVYKYRD 614
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: TPSD2_ABIGR (Myrcene synthase, chloroplastic OS=Abies grandis GN=ag2 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.959e-19 Identity = 67/230 (29.13%), Postives = 108/230 (46.96%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPN---PFSASFTRASLNTARMVPLMYGYDD-----NQRLPRL--EEYVKSLLF 662 W+ IE LPE MK + + + NE++ + K G N ++ +RKAW + ++++ EAKW ++G++P EEY +NG VSS + ++ ID ++ LRL D K + G + S I YM ++ T EDA H ++D K LN E L N P A + + + R + +Y Y D N+ +L E ++S+LF Sbjct: 400 WNSSEIEHLPEYMKCVYMVVFETVNELTREAEKTQGRNTLNYVRKAWEAYFDSYMEEAKWISNGYLPMFEEYHENGKVSSAYRVATLQPILTLNAWLPDYILKGIDFPSRFNDLASSFLRLRGDTRCYKADRDRGEEASCISCYMKDNPGSTEEDALNHINAMVNDIIKELNWELLRSNDNIPMLAK--KHAFDITRALHHLYIYRDGFSVANKETKKLVMETLLESMLF 627
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.959e-19 Identity = 62/225 (27.56%), Postives = 107/225 (47.56%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMY----GYDDNQRLPRLEEYVKSLLFD 665 WD+ +E+LP+ MK+ +K L + +E ++ E V R+A+ L + EA W G +P ++YL NG +++ + +++NP + + +RL +DL S E Q G+ S I YM +H V+ ++A K +D WK +N+EC+ + S +N AR+ + Y GY D+Q +L+++VK L D Sbjct: 377 WDMSCLEKLPDYMKVIYKLLLNTFSEFEKELTAEGKSYSVKYGREAFQELVRGYYLEAVWRDEGKIPSFDDYLYNGSMTTGLPLVSTASFMGVQEITGLNEFQWLETNPKLSYASGAFIRLVNDLTSHVTEQQRGHVASCIDCYMNQH-GVSKDEAVKILQKMATDCWKEINEECMRQSQVSVGHLMRIVNLARLTDVSYKYGDGYTDSQ---QLKQFVKGLFVD 597
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: TPSD2_PICAB (Isopimaradiene synthase, chloroplastic OS=Picea abies GN=TPS-ISO PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.341e-19 Identity = 62/223 (27.80%), Postives = 104/223 (46.64%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMYGYDDNQRLP---RLEEYVKSLLF 662 WDL ++++P+ MKICF L + NEI+ + K G + + +R L A EA+W A+ ++P +EY++N VS +T + + I + + RL +D + + E G S + YM EH +++ E+A KH + +A LN+E ++ S R TAR++ L Y D L ++E+VK+ LF Sbjct: 641 WDLSLVDRMPQDMKICFTVLYNTVNEIAVEGRKRQGRDVLGYIRNVLEILLAAHTKEAEWSAARYVPSFDEYIENASVSISLGTLVLISVLFTGEILTDDVLSKIGRGSRFLQLMGLTGRLVNDTKTYEAERGQGEVASAVQCYMKEHPEISEEEALKHVYTVMENALDELNREFVNNRDVPDSCRRLVFETARIMQLFYMEGDGLTLSHEMEIKEHVKNCLF 863
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: TPSDV_ABIGR (Abietadiene synthase, chloroplastic OS=Abies grandis GN=ag22 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.720e-19 Identity = 59/223 (26.46%), Postives = 104/223 (46.64%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMYGYDDNQRLP---RLEEYVKSLLF 662 WDL ++Q+P+ MKICF + N+I+ + + G + + ++ W A+ EA+W + ++P EY++N VS +T E + ID + + RL +D + + E G S I YM +H ++ E+A +H + +A + LN+E ++ N + R TAR++ L Y D L ++E+VK+ LF Sbjct: 643 WDLSLVDQMPQQMKICFVGFYNTFNDIAKEGRERQGRDVLGYIQNVWKVQLEAYTKEAEWSEAKYVPSFNEYIENASVSIALGTVVLISALFTGEVLTDEVLSKIDRESRFLQLMGLTGRLVNDTKTYQAERGQGEVASAIQCYMKDHPKISEEEALQHVYSVMENALEELNREFVN-NKIPDIYKRLVFETARIMQLFYMQGDGLTLSHDMEIKEHVKNCLF 864
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: TPSD8_ABIGR (Beta-phellandrene synthase, chloroplastic OS=Abies grandis GN=ag8 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.720e-19 Identity = 56/179 (31.28%), Postives = 86/179 (48.04%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPN 539 W+ E+LPE MK + AL + +++ + K G + ++ RKAW +++ EAKW ASG++P EEYL+N VSS + + ++ ID ++ LRL D K + G + S I YM ++ +T EDA H I+D K LN E L P+ Sbjct: 403 WNPSEKERLPEYMKEIYMALYEALTDMAREAEKTQGRDTLNYARKAWEVYLDSYTQEAKWIASGYLPTFEEYLENAKVSSGHRAAALTPLLTLDVPLPDDVLKGIDFPSRFNDLASSFLRLRGDTRCYKADRDRGEEASSISCYMKDNPGLTEEDALNHINAMINDIIKELNWELLKPD 581
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: DCS1_GOSHI ((+)-delta-cadinene synthase OS=Gossypium hirsutum GN=CDN1 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.720e-19 Identity = 59/204 (28.92%), Postives = 94/204 (46.08%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMYGYDD 614 WD+ I++LPE MK +KAL D+ E+ V + V + A L ++L EA+W + P EE+ N + + +T ET + ++P I+ + I R DD+ K +++ +D S I YM E+ VTA++A + AWK +NQ L P SLN AR++ ++Y D Sbjct: 329 WDIKCIDELPEYMKPSYKALLDVYEEMEQLVAEHGRQYRVEYAKNAMIRLAQSYLVEARWTLQNYKPSFEEFKANALPTCGYAMLAITSFVGMGDIVTPETFKWAANDPKIIQASTIICRFMDDVTEHKFKHRREDDCSAIECYMEEY-GVTAQEAYDVFNKHVESAWKDVNQGFLKPTEMPTEVLNRSLNLARVMDVLYREGD 531
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.270e-18 Identity = 58/204 (28.43%), Postives = 94/204 (46.08%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMYGYDD 614 WD+ I++LPE MK +KAL D+ E+ V + V + A L ++L EA+W + P EE+ N + + +T ET + ++P I+ + I R DD+ K +++ +D S I YM E+ V+A++A + AWK +NQE P SLN AR++ ++Y D Sbjct: 329 WDIKCIDELPEYMKPSYKALLDVYKEMEQLVAEHGRQYRVEYAKNAMIRLAQSYLVEARWTLQNYKPSFEEFKANALPTCGYAMLAITSFVGMGDIVTPETFKWAANDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEY-GVSAQEAYDVFNKHVESAWKDVNQEFQKPTEMPTEVLNRSLNLARVMDVLYREGD 531
BLAST of FC872973 vs. ExPASy Swiss-Prot
Match: TPSD4_ABIGR (Delta-selinene synthase OS=Abies grandis GN=ag4 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.658e-18 Identity = 58/226 (25.66%), Postives = 101/226 (44.69%), Query Frame = 3 Query: 3 WDLGGIEQLPECMKICFKALNDITNEISNKVYKEHGYNPVHSLRKAWGSLCNAFLTEAKWFASGHMPKAEEYLKNGIVSSXXXXXXXXXXXXXXXXITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHATDKISDAWKRLNQECLSPNPFSASFTRASLNTARMVPLMYGYDDNQRLPRLEEYVKSLLFDNLPTQ 680 WDL + LP+ +KI F+ + NE+ ++ K G + ++ W ++L EA+W A+GH+P EY+KNG+ SS + + I S I+ + R+ DDL +DE + G S + YM E+ + T E+A H ++ + + N E + + + + N R + +Y Y D + ++ VK +F L Q Sbjct: 353 WDLSLTDDLPDYIKIAFQFFFNTVNELIVEIVKRQGRDMTTIVKDCWKRYIESYLQEAEWIATGHIPTFNEYIKNGMASSGMCILNLNPLLLLDKLLPDNILEQIHSPSKILDLLELTGRIADDLKDFEDEKERGEMASSLQCYMKENPESTVENALNHIKGILNRSLEEFNWEFMKQDSVPMCCKKFTFNIGRGLQFIYKYRDGLYIS--DKEVKDQIFKILVHQ 576 The following BLAST results are available for this feature:
BLAST of FC872973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872973 ID=FC872973; Name=FC872973; organism=Citrus clementina; type=EST; length=763bpback to top |