FC872976
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP3_ORYSJ (Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 5.524e-52 Identity = 114/227 (50.22%), Postives = 137/227 (60.35%), Query Frame = 1 Query: 1 FHSKQVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAP--------------------------TPTSFAQSFDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVE--------PSHNVPLAEQEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 F+S +VSP++P+ Y I +SYELNVL TRGPRRM C+M +IP SS+E GG P + TSF++S + F+S + + +PL L+NK PRWHEQLQCWCLNFRGRVT+ASVKNFQLVAA PS P A+ EKVILQFGK+ +D+FTMDY YPLSAFQAFAICLSSFDTK ACE Sbjct: 228 FNSTKVSPKVPSVTYNIAQVSYELNVLGTRGPRRMRCMMHSIPASSVEPGGIVPGQPEQIVPRALEDSFRSTTSFSQSFRSTTSFSKSIMDPSMDFSSARFSD-----ISGSIMGGDDNGEIKERPLVLRNKPPRWHEQLQCWCLNFRGRVTIASVKNFQLVAAPSPPPAGAPTPSQPGP-ADPEKVILQFGKVARDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 448
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP13_ORYSJ (Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica GN=TULP13 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.965e-49 Identity = 111/218 (50.92%), Postives = 129/218 (59.17%), Query Frame = 1 Query: 7 SKQVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAPT-PTSF-AQSFDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQ----------------PLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPL---------AEQEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 S + + + P Y I +ISYELNV TRGPRRM C+M +IP SS+E GG P+ P S A S +E F S + + PL L+NKAPRWHEQLQCWCLNFRGRVTVASVKNFQL+AA +P+ P E +KVILQFGK+ KD+FTMDYHYPLSAFQAFAI LSSFDTK ACE Sbjct: 223 SNKGTAKHPCSTYSIANISYELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHSLNESSFRSVSFSKSSVMDHSMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATQPAAGAPTPSQPVPPPPPEHDKVILQFGKVAKDMFTMDYHYPLSAFQAFAISLSSFDTKLACE 440
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP12_ORYSJ (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica GN=TULP12 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 7.466e-49 Identity = 111/226 (49.12%), Postives = 133/226 (58.85%), Query Frame = 1 Query: 7 SKQVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAP-----------------TPTSFAQSFDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQE------------------KVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 S++VSP+LP +Y I + YELNVL TRGPRRM C M +IP S+++ G P T TS SF ++ F+S + E +PL L+NK PRWHEQLQCWCLNFRGRVTVASVKNFQL+AA S + L +Q+ KVILQFGK+GKD+FTMDY YPLSAFQAFAICL+SFDTK ACE Sbjct: 230 SRRVSPKLPTGSYPIAHVKYELNVLGTRGPRRMQCTMHSIPASAVDPEGVVPGQPEQLLPGPFEESFRSTNTSSRFSFMDRSLDFSSSRFSE---ISGSANQQGEDDIPEAKERPLVLRNKVPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAAS-SESSQLEQQQQQQQQNHASSSSSASDHGKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 451
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP5_ARATH (Tubby-like F-box protein 5 OS=Arabidopsis thaliana GN=TULP5 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.172e-48 Identity = 107/212 (50.47%), Postives = 132/212 (62.26%), Query Frame = 1 Query: 1 FHSKQVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAPTPTSFAQ-SFDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAV---------------EPSHNVPLAEQ---EKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 F+SK+VSP++P+ +Y I ++YELN+L TRGPRRMNCIM +IP ++E GG P+ F Q S DE F S S K +PL LK K PRW + L+CWCLNF+GRVTVASVKNFQL++A PS + EQ +K+IL FGK+GKD+FTMDY YPLSAFQAFAI LS+FDTK ACE Sbjct: 224 FNSKKVSPKVPSGSYNIAQVTYELNLLGTRGPRRMNCIMHSIPSLALEPGGTVPSQPEFLQRSLDESFRSIGSSK------IVNHSGDFTRPKEEEGKVRPLVLKTKPPRWLQPLRCWCLNFKGRVTVASVKNFQLMSAATVQPGSGSDGGALATRPSLSPQQPEQSNHDKIILHFGKVGKDMFTMDYRYPLSAFQAFAISLSTFDTKLACE 429
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP7_ORYSJ (Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica GN=TULP7 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.837e-48 Identity = 113/238 (47.48%), Postives = 133/238 (55.88%), Query Frame = 1 Query: 1 FHSKQVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAP------TPTSFAQSFDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQ------------PLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAV---------EPSHNVPLAEQ------------------EKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 F S++VSP++P Y I ++YELNVL TRGPRRM C M +IP S++E GG P P F +SF SF+ + T + PL L+NKAPRWHEQLQCWCLNFRGRVTVASVKNFQL+AA EPS A+Q + VILQFGK+ KD+FTMDY YPLSAFQAFAICL+SFDTK ACE Sbjct: 225 FSSRKVSPKVPTGCYPIVQVNYELNVLGTRGPRRMQCAMHSIPASAVEPGGIVPGQPKELLPRLFEESFRSMATSFSKYSITDHSTDFSSSRFSEFGGGALQGQEQEQDGDDVNKERPLVLRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAAPQPSSGAASEPSQAGQAAQQQTQPSQPSSSSSSSSSNHDTVILQFGKVAKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 462
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP9_ARATH (Tubby-like F-box protein 9 OS=Arabidopsis thaliana GN=TULP9 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 4.097e-47 Identity = 104/191 (54.45%), Postives = 125/191 (65.45%), Query Frame = 1 Query: 13 QVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGG--AAPTPTSFAQSFDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 +VSPR+P +Y I ISYELNVL +RGPRRM CIM TIP S +E G A+ + +SF+ F S + +P+ PL L NKAPRWHEQL+CWCLNF GRVTVASVKNFQLVA + E++ILQFGK+GKD+FTMDY YP+SAFQAFAICLSSF+T+ ACE Sbjct: 201 KVSPRVPQGSYPIAHISYELNVLGSRGPRRMRCIMDTIPMSIVESRGVVASTSISSFSSRSSPVFRSHS-----KPLR---SNSASCSDSGNNLGDPPLVLSNKAPRWHEQLRCWCLNFHGRVTVASVKNFQLVAVSDCEAG---QTSERIILQFGKVGKDMFTMDYGYPISAFQAFAICLSSFETRIACE 380
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP11_ARATH (Tubby-like F-box protein 11 OS=Arabidopsis thaliana GN=TULP11 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.529e-46 Identity = 98/197 (49.75%), Postives = 124/197 (62.94%), Query Frame = 1 Query: 1 FHSKQVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAPTPTSFAQSFDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHN----VPLAEQEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 ++ +VS ++P +Y + I+YELNVL +RGPR+M C+M TIP S++E G A P+ F S + K + PL L NK PRWHEQL+CWCLNF GRVTVASVKNFQLVAA + P + E++ILQFGK+GKD+FTMDY YP+SAFQAFAICLSSF+T+ ACE Sbjct: 206 YNPAKVSAKVPLGSYPVAHITYELNVLGSRGPRKMQCLMDTIPTSTMEPQGVASEPSEFPLLGTRSTLSRSQSKPLRSSS-------------SHLKETPLVLSNKTPRWHEQLRCWCLNFHGRVTVASVKNFQLVAAGASCGSGTGMSPERQSERIILQFGKVGKDMFTMDYGYPISAFQAFAICLSSFETRIACE 389
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP7_ARATH (Tubby-like F-box protein 7 OS=Arabidopsis thaliana GN=TULP7 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.233e-43 Identity = 95/193 (49.22%), Postives = 119/193 (61.66%), Query Frame = 1 Query: 1 FHSKQVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAPTPTSFAQSFDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 F SKQ+SP++PA N+ +G +SY+ N+L++RGPRRM S++ +P+ +S S D++ T + K LKNKAPRWHE LQCWCLNF GRVTVASVKNFQLVA V+ S ++E V+LQFGK+G D FTMDY PLSAFQAFAICL+SF TK ACE Sbjct: 211 FASKQISPQVPAGNFEVGHVSYKFNLLKSRGPRRM--------VSTLRCPSPSPSSSSAGLSSDQKPCDVTKIMKKP----------------NKDGSSLTILKNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATVDQSQPSGKGDEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 379
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP9_ORYSJ (Tubby-like F-box protein 9 OS=Oryza sativa subsp. japonica GN=TULP9 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.155e-41 Identity = 95/193 (49.22%), Postives = 112/193 (58.03%), Query Frame = 1 Query: 1 FHSKQVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAPTPTSFAQSFDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 F SKQ++P + NY +G +SY+ N L++RGPRRM C + P S A ++ S +S PLAL+NKAPRWHE LQCWCLNF GRVTVASVKNFQLVA S +A++E VILQFGKI D FTMDY PLSAFQAFAICL+SF TK ACE Sbjct: 219 FASKQINPNVSGGNYEVGQVSYKFNFLKSRGPRRMQCNIQ------------CPVGQSTASDPLKKLISTSS---------------------------PLALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAPAGTSDPWGIADEETVILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP10_ORYSJ (Tubby-like F-box protein 10 OS=Oryza sativa subsp. japonica GN=TULP10 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.969e-41 Identity = 91/193 (47.15%), Postives = 112/193 (58.03%), Query Frame = 1 Query: 1 FHSKQVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAPTPTSFAQSFDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 F S+++ P++ A N+ +G ISY+ N+L++RGPRRM C M T ++ S + T L+NKAPRWHE LQCWCLNF GRVTVASVKNFQLVA +PSH + ++E VILQFGK+ +IFTMDY PLSAFQAFAICLSSF TK ACE Sbjct: 198 FGSRRICPQISAGNFNVGQISYKYNLLKSRGPRRMFCTME-----------CPSTQETWENSLKTKSLRCTGTT---------------------------VLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATADPSHPDSVGDEETVILQFGKVDSNIFTMDYRQPLSAFQAFAICLSSFGTKLACE 352 The following BLAST results are available for this feature:
BLAST of FC872976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872976 ID=FC872976; Name=FC872976; organism=Citrus clementina; type=EST; length=798bpback to top |