FC872976
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP5_ORYSJ (Tubby-like F-box protein 5 OS=Oryza sativa subsp. japonica GN=TULP5 PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 3.444e-70 Identity = 132/193 (68.39%), Postives = 145/193 (75.13%), Query Frame = 1 Query: 4 HSKQVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAPTPTSFAQSFDEQFFSFTSLKGKEP-ITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 H KQVSPRLP NY + ++SYEL VLR RGPRRM C M +IP I+EGG APTPT S DEQ + ++ KGKEP I + PL LKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVA+V+PS +P AEQEKVILQFGKIGKDIFTMDY YPLSAFQAFAICL+SFDTKPACE Sbjct: 236 HFKQVSPRLPLGNYNVATVSYELTVLRNRGPRRMQCTMHSIPALCIQEGGKAPTPTGIIHSLDEQVPALSTSKGKEPAIEFSSTSLSADLSGPVCTNEVPLVLKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVASVDPSLGIPAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLTSFDTKPACE 428
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP6_ORYSJ (Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica GN=TULP6 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.149e-57 Identity = 119/190 (62.63%), Postives = 135/190 (71.05%), Query Frame = 1 Query: 13 QVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAPTPTSFAQSFDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPL-AEQEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 QVSPR+PA NY + ISYELNVL RGPRRMNCIM +IP S+++EGG APT T F S + F S + + K + L LKNK+PRWHEQLQCWCLNFRGRVTVASVKNFQLVA+ E N P EQ+KVILQFGKIGKD+FTMDY YP+SAFQ+FAICLSSFDTK ACE Sbjct: 223 QVSPRVPAGNYPVSHISYELNVLGARGPRRMNCIMDSIPTSAVQEGGKAPTQTEFPLSGLDSFPSISFFRSKSA------RIDSATSQLSTQKEEKLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVASDE---NGPTNQEQDKVILQFGKIGKDLFTMDYRYPISAFQSFAICLSSFDTKIACE 403
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP2_ARATH (Tubby-like F-box protein 2 OS=Arabidopsis thaliana GN=TULP2 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.149e-57 Identity = 117/192 (60.94%), Postives = 136/192 (70.83%), Query Frame = 1 Query: 4 HSKQVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAPTPTSFAQSFDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 H KQ +P+LP + +G+I+YELNVLRTRGPRRM+C M +IP SS+ A P S Q +E+ S S KG+ T QPL LKNK+PRWHEQLQCWCLNF+GRVTVASVKNFQLVA ++ S + P E E+VILQFGKIGKDIFTMDY YPLSAFQAFAIC+SSFDTKPACE Sbjct: 213 HPKQAAPKLPTNSSTVGNITYELNVLRTRGPRRMHCAMDSIPLSSVI---AEP---SVVQGIEEEVSSSPSPKGETITT-----DKEIPDNSPSLRDQPLVLKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLVAEIDASLDAPPEEHERVILQFGKIGKDIFTMDYRYPLSAFQAFAICISSFDTKPACE 393
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP3_ARATH (Tubby-like F-box protein 3 OS=Arabidopsis thaliana GN=TULP3 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.830e-56 Identity = 115/190 (60.53%), Postives = 128/190 (67.37%), Query Frame = 1 Query: 10 KQVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAPTPTSFAQSFDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 KQVSPR+P+ NY + ISYELNVL +RGPRRM C+M IP S++E GG APT T S + F SF+ + K L LKNKAPRWHEQLQCWCLNF GRVTVASVKNFQLVAA E P E E VILQFGK+GKD+FTMDY YP+SAFQAF ICLSSFDTK ACE Sbjct: 223 KQVSPRIPSGNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSFFRSKS----IRAESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAAPENGPAGP--EHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 406
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP11_ORYSJ (Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica GN=TULP11 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.697e-56 Identity = 114/191 (59.69%), Postives = 129/191 (67.54%), Query Frame = 1 Query: 7 SKQVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAPTPTSFAQSFDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 S +SPR+PA NY + ISYELNVL +RGPRRM+C M +IP S+IE+GG APT T F S+ E F S K K L LKNK+PRWHE LQCWCLNF GRVTVASVKNFQLVA+ E N E + VILQFGK+GKD+FTMDY YP+SAFQAFAICLSSFDTK ACE Sbjct: 224 SNHLSPRIPAGNYPVSHISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTEFPLSYHESFTSIPFFKSKS------VRANNSTASLLTQNGSKLVLKNKSPRWHEHLQCWCLNFHGRVTVASVKNFQLVASDE--SNPTNQEHDDVILQFGKVGKDMFTMDYRYPISAFQAFAICLSSFDTKIACE 406
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP6_ARATH (Tubby-like F-box protein 6 OS=Arabidopsis thaliana GN=TULP6 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 6.306e-56 Identity = 117/196 (59.69%), Postives = 134/196 (68.37%), Query Frame = 1 Query: 7 SKQVSPRLPAYN--YRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAPTPTSFAQSFDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSH---NVPLAEQEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 S QVSP + + + Y I SI YELNVLRTRGPRRM CIM +IP S+I+EGG +PT F K K+P+ +PL LKNK+PRWHEQLQCWCLNF+GRVTVASVKNFQLVAA + N+P EQ++VILQFGKIGKDIFTMDY YP+SAFQAFAICLSSFDTKP CE Sbjct: 231 SMQVSPWVSSSSSSYNIASILYELNVLRTRGPRRMQCIMHSIPISAIQEGGKIQSPTEFTNQ---------GKKKKKPLM----DFCSGNLGGESVIKEPLILKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAAEAGKNMNIPEEEQDRVILQFGKIGKDIFTMDYRYPISAFQAFAICLSSFDTKPVCE 413
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP14_ORYSJ (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 6.306e-56 Identity = 119/218 (54.59%), Postives = 140/218 (64.22%), Query Frame = 1 Query: 1 FHSKQVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAPT-PTS-FAQSFDEQFFS--------------FTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQ---------EKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 F+S++VSP+ P+ Y I +SYELNVL TRGPRRMNC+M +IP SS+E GG P P S A+S DE F S F+S + + +PL L+NKAPRWHEQLQCWCLNF+GRVTVASVKNFQLVAA +P+ P Q +KVILQFGK+ KD+FTMDY YPLSAFQAFAICLSSFDTK ACE Sbjct: 228 FYSRKVSPKNPSSTYSIAQVSYELNVLGTRGPRRMNCVMHSIPASSLEAGGTVPCQPDSVLARSLDESFGSISFSKSSIMDRSIRFSSSRYSDISVGGPMVGGQALGDSDESKERPLILRNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAATQPAAGAPTPSQPAPPPPPDHDKVILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP10_ARATH (Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.076e-55 Identity = 121/223 (54.26%), Postives = 142/223 (63.68%), Query Frame = 1 Query: 1 FHSKQVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAPTPT------------------SFAQS-FDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLA-----------EQEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 FHS++VSP++P+ +Y I I+YELNVL TRGPRRM+CIM +IP SS+E GG+ P SF++S FD + F+S + E +PL LKNK PRWHEQLQCWCLNFRGRVTVASVKNFQLVAA +P A EQ+KVILQFGK+GKD+FTMDY YPLSAFQAFAICLSSFDTK ACE Sbjct: 230 FHSRRVSPKVPSGSYNIAQITYELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSFRSNISFSKSSFDHRSLDFSSSRFSE-------MGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQLVAARQPQPQGTGAAAAPTSAPAHPEQDKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.649e-54 Identity = 113/218 (51.83%), Postives = 141/218 (64.68%), Query Frame = 1 Query: 1 FHSKQVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAP------TPTSFAQSFD-----------EQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQ-PLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAA-VEPSHNVPLA------EQEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 F+SK+VSP++P+ +Y I ++YELNVL TRGPRRM+C+M +IP SS+E GG P P +F +SF ++ F+S + + + PL L+NKAPRWHEQLQCWCLNFRGRVT+ASVKNFQL+AA +P P EQ+K+ILQFGK+ KD+FTMDY YPLSAFQAFAICLSSFDTK ACE Sbjct: 228 FNSKKVSPKMPSGSYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAFEESFRSTTSFSKSSIMDRSMDFSSSRDFSSARFSDIAGGTINGDEEGQNKERPLVLRNKAPRWHEQLQCWCLNFRGRVTIASVKNFQLIAAPAQPPAGAPTPSQPAPPEQDKIILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TLP1_ARATH (Tubby-like F-box protein 1 OS=Arabidopsis thaliana GN=TULP1 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 8.522e-53 Identity = 117/229 (51.09%), Postives = 138/229 (60.26%), Query Frame = 1 Query: 1 FHSKQVSPRLPAYNYRIGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAPTPTSFA---QSFDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXX-----------------QPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPS-------HNVPLAE---------QEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 F+SK+VSP++P+ +Y+I +SYELNVL TRGPRRM+C M +IP SS+ EGG P DE F S TS ++ ITY PL LKNK PRWHEQLQCWCLNFRGRVTVASVKNFQL+AA +P PL + +K+ILQFGK+GKD+FTMD+ YPLSAFQAFAICLSSFDTK ACE Sbjct: 228 FYSKRVSPKVPSGSYKIAQVSYELNVLGTRGPRRMHCAMNSIPASSLAEGGTVPGQPDIIVPRSILDESFRSITSSSSRK-ITYDYSNDFSSARFSDILGPLSEDQEVVLEEGKERNSPPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAANQPQPQPQPQPQPQPLTQPQPSGQTDGPDKIILQFGKVGKDMFTMDFRYPLSAFQAFAICLSSFDTKLACE 455 The following BLAST results are available for this feature:
BLAST of FC872976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872976 ID=FC872976; Name=FC872976; organism=Citrus clementina; type=EST; length=798bpback to top |