FC872976
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TUB1_CAEEL (Tubby protein homolog 1 OS=Caenorhabditis elegans GN=tub-1 PE=1 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 1.242e-19 Identity = 64/186 (34.41%), Postives = 89/186 (47.85%), Query Frame = 1 Query: 34 AYNYRIGSISYELNVLRTRGPRRMNCIMATI--PFSSIEEGGAAPTPTSFAQSFDEQFF--SFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFDTKPACE 579 A + ++ YE NVL +GPR+M +M I P + P + E++ SLK L NK+P+W+++ Q + LNF GRVT ASVKNFQ++ P E +++QFG+I D FTMD+ YPLSA QAF I ++SF K ACE Sbjct: 277 AIRQELAAVIYETNVLGFKGPRKMTIVMPGIEPPTENRPAVRCPVRPIQDKHTLLERYRLNDLDSLK---------------------------ILSNKSPQWNDETQSYVLNFHGRVTQASVKNFQIIHQSSP---------EYIVMQFGRISDDEFTMDFRYPLSAVQAFGIAMTSFHGKLACE 426
BLAST of FC872976 vs. ExPASy Swiss-Prot
Match: TULP2_HUMAN (Tubby-related protein 2 OS=Homo sapiens GN=TULP2 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 5.219e-18 Identity = 61/171 (35.67%), Postives = 88/171 (51.46%), Query Frame = 1 Query: 49 IGSISYELNVLRTRGPRRMNCIMATIPFSSIEEGGAAPTPTSFAQSFDEQFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDYHYPLSAFQAFAICLSSFD 561 +G++ YE NVL GPR+M I+ P ++ + P + +S ++ K+ + L L NK P W ++ + LNF GRVT ASVKNFQ+V +P H QE ++LQFG++G D FTMD+ +P S QAF+ICLSSF+ Sbjct: 387 LGAVCYEPNVLGYLGPRKMTVIL---PGTNSQNQRINVQPLNEQESLLSRY----QRGDKQGL---------------------LLLHNKTPSWDKENGVYTLNFHGRVTRASVKNFQIV---DPKH------QEHLVLQFGRVGPDTFTMDFCFPFSPLQAFSICLSSFN 520 The following BLAST results are available for this feature:
BLAST of FC872976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872976 ID=FC872976; Name=FC872976; organism=Citrus clementina; type=EST; length=798bpback to top |