FC873139
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873139 vs. ExPASy Swiss-Prot
Match: ATG4A_PONAB (Cysteine protease ATG4A OS=Pongo abelii GN=ATG4A PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.716e-21 Identity = 63/188 (33.51%), Postives = 90/188 (47.87%), Query Frame = 3 Query: 285 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP---------YAMCRSWEALARCQRAETGLGCQSLPMAIYV--VSGDEDGERGGAPVVCID---DASRHCSVFSKGQADWTPILLLVP 806 D S+R+ +YR+ F PIG + +SD GWGCMLR QM++AQAL+ LGR W QK +EY IL F D + +SIH + Q G G + G W GP A+ W +LA + + + + V + D G+R + + S +CS W P+LL+VP Sbjct: 48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRVLPLGADTAGDRPPDSLTASNLSKGTSAYCSA-------WKPLLLIVP 228
BLAST of FC873139 vs. ExPASy Swiss-Prot
Match: ATG4B_HUMAN (Cysteine protease ATG4B OS=Homo sapiens GN=ATG4B PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.487e-20 Identity = 64/191 (33.51%), Postives = 92/191 (48.17%), Query Frame = 3 Query: 285 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQSLPMAIYV-----VSGDEDGERGGAPVVCID------DASRHCSVFSKG------QADWTPILLLVP 806 D +SR+ +YRK F IG + TSD GWGCMLR QM+ AQAL+ LGR WR +K Y +L+ F D + S +SIH + Q G G + G W GP + + + LA + +A+++ V +E V C D+ RHC+ F G + W P++LL+P Sbjct: 45 DVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSS--------LAVHIAMDNTVVMEEIRRLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVLLIP 227
BLAST of FC873139 vs. ExPASy Swiss-Prot
Match: ATG4A_XENLA (Cysteine protease ATG4A OS=Xenopus laevis GN=atg4a PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.487e-20 Identity = 65/188 (34.57%), Postives = 92/188 (48.94%), Query Frame = 3 Query: 285 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQSLPMAIYVVSGDEDGERGGAPVVC--------IDDASRHCSVFSKGQ------ADWTPILLLVP 806 D SR+ +YRK F PIG + +SD GWGCMLR QM++AQAL+ LGR WR K EY +IL F D + +SIH + Q G G + G W GP + + + LA + +A+Y VS D +C + A+ H S +S+ + + W P+LL+VP Sbjct: 50 DIVSRLWFTYRKKFSPIGGTGPSSDTGWGCMLRCGQMMLAQALVCQHLGRDWRWEKHKNHPEEYQQILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNS--------LAVY-VSMDNTVVVEDIKTMCKYQPQSCSMAQAASHQSTWSRCRDTSGHCSGWRPLLLVVP 228
BLAST of FC873139 vs. ExPASy Swiss-Prot
Match: ATG4B_XENLA (Cysteine protease ATG4B OS=Xenopus laevis GN=atg4b PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.536e-20 Identity = 63/183 (34.43%), Postives = 86/183 (46.99%), Query Frame = 3 Query: 285 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP---------YAMCRSWEALARCQRAETGLGCQSLPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPILLLVP 806 D +SR+ +YR+ F IG + TSD GWGCMLR QM+ AQAL+ +GR WR QKP EY+ IL F D + S +SIH + Q G G G W GP A+ W ++A + + + SG E + G D+ C A W P++LL+P Sbjct: 45 DITSRLWFTYRRNFQAIGGTGPTSDTGWGCMLRCGQMIFAQALICRHVGRDWRWDKQKP-KGEYLNILTAFLDKKDSYYSIHQIAQMGVGEGKYIGQWYGPNTVAQVLRKLAVFDQWSSIAVHIAMDNTVVVDEIRRLCRAGSG-ESSDAGALSNGYTGDSDPSC-------AQWKPLVLLIP 218
BLAST of FC873139 vs. ExPASy Swiss-Prot
Match: ATG4B_DANRE (Cysteine protease ATG4B OS=Danio rerio GN=atg4b PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.536e-20 Identity = 62/188 (32.98%), Postives = 90/188 (47.87%), Query Frame = 3 Query: 285 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCR---------SWEALARCQRAETGLGCQSLPMAIYVVSGDEDGERGGA-----PVVCIDDASRHCSVFSKGQADWTPILLLVP 806 D +SR+ +YRK F PIG + TSD GWGCMLR QM++ +AL+ LGR W+ + EYV IL+ F D + S +SIH + Q G G + G W GP + + SW LA + + + + D +RG P D C++ + A W P++LL+P Sbjct: 45 DVTSRLWFTYRKNFQPIGGTGPTSDTGWGCMLRCGQMILGEALICRHLGRDWKWSPGQRQRPEYVSILNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDSWSRLAVHVAMDNTVVIEEIKRLCMPWL---DFDRGACAVSEEPREMNGDLEGACALAEEETALWKPLVLLIP 229
BLAST of FC873139 vs. ExPASy Swiss-Prot
Match: ATG4A_BOVIN (Cysteine protease ATG4A OS=Bos taurus GN=ATG4A PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.536e-20 Identity = 64/185 (34.59%), Postives = 89/185 (48.11%), Query Frame = 3 Query: 285 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP---------YAMCRSWEALARCQRAETGLGCQSLPMAIYV--VSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPILLLVP 806 D S+R+ +YR+ F PIG + +SD GWGCMLR QM++AQAL+ LGR W QK +EY IL F D + +SIH + Q G G + G W GP A+ W +LA + + + + +S D ER P+ + AS S W P+LL+VP Sbjct: 48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRTLSLSADTPAER---PLESL-TASNQSKGPSACCTAWKPLLLIVP 228
BLAST of FC873139 vs. ExPASy Swiss-Prot
Match: ATG4B_MOUSE (Cysteine protease ATG4B OS=Mus musculus GN=Atg4b PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 4.326e-20 Identity = 63/191 (32.98%), Postives = 93/191 (48.69%), Query Frame = 3 Query: 285 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQSLPMAIYV-----VSGDEDGERGGAPVVCI------DDASRHCSVFSKG------QADWTPILLLVP 806 D +SR+ +YR+ F IG + TSD GWGCMLR QM+ AQAL+ LGR WR +K Y +L+ F D + S +SIH + Q G G + G W GP + + + LA + +A+++ V +E A + C D+ RHC+ F G + W P++LL+P Sbjct: 45 DVASRLWFTYRRNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFNVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSS--------LAVHIAMDNTVVMEEIRRLCRANLPCAGAAALPTDSERHCNGFPAGAEVTNRPSAWRPLVLLIP 227
BLAST of FC873139 vs. ExPASy Swiss-Prot
Match: ATG4A_CHICK (Cysteine protease ATG4A OS=Gallus gallus GN=ATG4A PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.378e-20 Identity = 48/112 (42.86%), Postives = 65/112 (58.04%), Query Frame = 3 Query: 285 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALA 620 D S+R+ +YR+ F PIG + +SD GWGCMLR QM++AQAL+ LGR W+ K EY ILH F D + +SIH + Q G G + G W GP + + + LA Sbjct: 31 DVSARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWQWEKHKKQPEEYHRILHCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLA 142
BLAST of FC873139 vs. ExPASy Swiss-Prot
Match: ATG4_PHANO (Probable cysteine protease ATG4 OS=Phaeosphaeria nodorum GN=ATG4 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.782e-19 Identity = 74/198 (37.37%), Postives = 95/198 (47.98%), Query Frame = 3 Query: 276 FNQDFSSRILISYRKGFDPIGDSK---------------------ITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAY-GLAAGSWVGPYAMCRSWEALARCQRAETGLGCQSLPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPILLLV 803 F DF SR+ ++YR GF PI S+ TSD G+GCM+RS Q ++A AL RLGR WR + D+++ EIL LF D +PFSIH ++ G A G G W GP A R + LA R E GL +Y VSGD GA V +D + +V G W P L+LV Sbjct: 96 FLDDFESRVWMTYRSGFSPIQKSQDPKATSAMSFRVRMQNLASPGFTSDAGFGCMIRSGQCILANALQILRLGRDWRWQ-ENHADKDHAEILSLFADDPQAPFSIHRFVEHGAAVCGKYPGEWFGPSAAARCIQDLANKHR-EAGL-------KVY-VSGD------GADV--YEDKLKQVAVDEDGL--WQPTLILV 273
BLAST of FC873139 vs. ExPASy Swiss-Prot
Match: ATG4B_CHICK (Cysteine protease ATG4B OS=Gallus gallus GN=ATG4B PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.391e-18 Identity = 48/112 (42.86%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 285 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALA 620 D +SR+ +YRK F IG + TSD GWGCMLR QM+ AQAL+ LGR WR K Y +L+ F D + S +SIH + Q G G + G W GP + + + LA Sbjct: 44 DVTSRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWIKGKRQTDNYFSVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLA 155 The following BLAST results are available for this feature:
BLAST of FC873139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873139 ID=FC873139; Name=FC873139; organism=Citrus clementina; type=EST; length=808bpback to top |