FC873162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873162 vs. ExPASy Swiss-Prot
Match: SODCP_ZANAE (Superoxide dismutase [Cu-Zn], chloroplastic OS=Zantedeschia aethiopica GN=SODCP PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.081e-12 Identity = 35/39 (89.74%), Postives = 35/39 (89.74%), Query Frame = 2 Query: 2 AFVVLELEDDLEKSGHELSLTTGNARGRLACGVVGLTPV 118 AFVV ELEDDL K GHELSLTTGNA GRLACGVVGLTPV Sbjct: 178 AFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 216
BLAST of FC873162 vs. ExPASy Swiss-Prot
Match: SODCP_VITVI (Superoxide dismutase [Cu-Zn], chloroplastic OS=Vitis vinifera GN=SODCP PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.997e-11 Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 2 AFVVLELEDDLEKSGHELSLTTGNARGRLACGVVGLTPV 118 A VV ELEDDL K GHELSLTTGNA GRLACGVVGLTP+ Sbjct: 174 ALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPI 212
BLAST of FC873162 vs. ExPASy Swiss-Prot
Match: SODCP_SOLLC (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum GN=SODCP.2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.997e-11 Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 2 AFVVLELEDDLEKSGHELSLTTGNARGRLACGVVGLTPV 118 A VV ELEDDL K GHELSLTTGNA GRLACGVVGLTP+ Sbjct: 179 ALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPI 217
BLAST of FC873162 vs. ExPASy Swiss-Prot
Match: SODCP_PINSY (Superoxide dismutase [Cu-Zn], chloroplastic (Fragment) OS=Pinus sylvestris GN=SODCP PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.997e-11 Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 2 AFVVLELEDDLEKSGHELSLTTGNARGRLACGVVGLTPV 118 A VV ELEDDL K GHELSLTTGNA GRLACGVVGLTP+ Sbjct: 103 ALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPI 141
BLAST of FC873162 vs. ExPASy Swiss-Prot
Match: SODCP_PETHY (Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida GN=SODCP PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.997e-11 Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 2 AFVVLELEDDLEKSGHELSLTTGNARGRLACGVVGLTPV 118 A VV ELEDDL K GHELSLTTGNA GRLACGVVGLTP+ Sbjct: 181 ALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPI 219
BLAST of FC873162 vs. ExPASy Swiss-Prot
Match: SODCP_ORYSJ (Superoxide dismutase [Cu-Zn], chloroplastic OS=Oryza sativa subsp. japonica GN=SODCP PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.997e-11 Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 2 Query: 2 AFVVLELEDDLEKSGHELSLTTGNARGRLACGVVGLTPV 118 AFVV ELEDDL K GHELSL+TGNA GRLACGVVGLTP+ Sbjct: 173 AFVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGLTPL 211
BLAST of FC873162 vs. ExPASy Swiss-Prot
Match: SODCP_ARATH (Superoxide dismutase [Cu-Zn], chloroplastic OS=Arabidopsis thaliana GN=SODCP PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 2.608e-11 Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 2 Query: 2 AFVVLELEDDLEKSGHELSLTTGNARGRLACGVVGLTPV 118 AFVV EL+DDL K GHELSLTTGNA GRLACGV+GLTP+ Sbjct: 178 AFVVHELKDDLGKGGHELSLTTGNAGGRLACGVIGLTPL 216
BLAST of FC873162 vs. ExPASy Swiss-Prot
Match: SODCP_SOLCS (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra GN=SODCP PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.449e-11 Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 2 AFVVLELEDDLEKSGHELSLTTGNARGRLACGVVGLTPV 118 AFVV EL DDL K GHELSL+TGNA GRLACGVVGLTPV Sbjct: 182 AFVVHELADDLGKGGHELSLSTGNAGGRLACGVVGLTPV 220
BLAST of FC873162 vs. ExPASy Swiss-Prot
Match: SODCP_MEDSA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Medicago sativa GN=SODCP PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.449e-11 Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 2 AFVVLELEDDLEKSGHELSLTTGNARGRLACGVVGLTPV 118 A VV ELEDDL K GHELSL+TGNA GRLACGVVGLTPV Sbjct: 164 ALVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGLTPV 202
BLAST of FC873162 vs. ExPASy Swiss-Prot
Match: SODCP_SPIOL (Superoxide dismutase [Cu-Zn], chloroplastic OS=Spinacia oleracea GN=SODCP PE=1 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 9.912e-11 Identity = 33/39 (84.62%), Postives = 33/39 (84.62%), Query Frame = 2 Query: 2 AFVVLELEDDLEKSGHELSLTTGNARGRLACGVVGLTPV 118 A VV ELEDDL K GHELS TTGNA GRLACGVVGLTPV Sbjct: 184 ALVVHELEDDLGKGGHELSPTTGNAGGRLACGVVGLTPV 222 The following BLAST results are available for this feature:
BLAST of FC873162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873162 ID=FC873162; Name=FC873162; organism=Citrus clementina; type=EST; length=155bpback to top |