FC873342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_CHLAA (Peptidyl-tRNA hydrolase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=pth PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.613e-44 Identity = 90/186 (48.39%), Postives = 125/186 (67.20%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKI-PLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 WLIVGLGNPG++Y TRHN+GF VD +AE G++ + +G I V+LAKPQT+MN SGQ+V ++ ++YKI P +++LVI+DDLDLPF+K+R+ +G G HNGMRSI+ G+ EFPRLR+GIG+PPGKMD+ ++VL F+ E L + +AV ++L EG A N Sbjct: 2 WLIVGLGNPGERYARTRHNIGFRSVDTLAERHGLTFRPQRANSQLAEGNIYGQRVVLAKPQTYMNLSGQAVVALCNWYKIDPARELLVIYDDLDLPFAKLRIRERGSAGTHNGMRSIVAQL-GTTEFPRLRVGIGQPPGKMDAADYVLGRFTPDEEAALPDLLGRIADAVEVILREGLTTAMNRYN 186
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_THEFY (Peptidyl-tRNA hydrolase OS=Thermobifida fusca (strain YX) GN=pth PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.641e-41 Identity = 81/180 (45.00%), Postives = 120/180 (66.67%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKA 684 WL+VGLGNPG +Y G RHNVGF +VD +A G A + +G+ PV+LAKP ++MN SG V + ++YK+P+ +++V+ D+LD+PF++++L GG GHNG+RSI GS ++ R+R+GIGRPPG+MD+ +FVL+ FS ER+ELD + +AV ++ G KA Sbjct: 35 WLVVGLGNPGPKYAGNRHNVGFMVVDELAAQRGERWRLHKAHAQVVETRVGDAPVVLAKPASYMNLSGGPVAKLSAFYKVPVDRIIVVHDELDIPFARLKLKRGGGSAGHNGLRSITASL-GSPDYVRVRVGIGRPPGRMDAASFVLQDFSTAERKELDVHVARAADAVETVVTSGLEKA 213
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_EXIS2 (Peptidyl-tRNA hydrolase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=pth PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.641e-41 Identity = 80/164 (48.78%), Postives = 112/164 (68.29%), Query Frame = 1 Query: 151 IVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGV 642 IVGLGNPG +Y TRHN+GF +DA+A+ GI ++ FKA FG G I V+L KP T+MN SG++V ++ +YKI ++ VLVI+DDLDLP KMRL KG GGHNG++S+I H G+++ RL++G+GRPP + +++VL PF+K E+ L V Sbjct: 4 IVGLGNPGAKYTNTRHNIGFLAIDALAKEHGIKLTESKFKAVFGTGMIKGERVVLVKPLTYMNLSGEAVRPLLDFYKIAVEDVLVIYDDLDLPLEKMRLRSKGSAGGHNGVKSLIQHL-GTQDIKRLKLGVGRPPAPIQVIDWVLMPFAKSEQTTLQHVLSDSV 166
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_THETN (Peptidyl-tRNA hydrolase OS=Thermoanaerobacter tengcongensis GN=pth PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.143e-41 Identity = 87/185 (47.03%), Postives = 123/185 (66.49%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 ++I GLGNPGK+Y GTRHNVGF ++DA+++ GI VS + FK+ G+G V+L KPQTFMN SG+++ V++YKIPL+ V+V++DD DL K+R+ KG GGHNGM SII + S +FPR+RIGIG+P D V VL FS +E++ +D ++ EAV ++ G A + N Sbjct: 2 YIIAGLGNPGKEYEGTRHNVGFMVIDALSKKLGIEVSRLKFKSLMGEGHFKGEKVILLKPQTFMNLSGEALYDAVNFYKIPLENVIVVYDDKDLEVGKIRIRRKGSSGGHNGMNSII-YLLNSEDFPRVRIGIGKPEDG-DLVRHVLGRFSDEEKKVIDEAVERAAEAVIDIMENGIEHAMSRFN 184
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_CLONN (Peptidyl-tRNA hydrolase OS=Clostridium novyi (strain NT) GN=pth PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.814e-40 Identity = 83/188 (44.15%), Postives = 123/188 (65.43%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 +LIVGLGNPGK+Y TRHNVGF+++D I+E I ++ FK +G G I N V+L KP T+MN SG+S+ + +YKIP + V+VI+DD+ L +MR+ KG GGHNG+++II HF GS FPR+++G+G+P + D V+ VL F+K +R+ L F+ +A ++ +G +A N K Sbjct: 2 FLIVGLGNPGKEYEHTRHNVGFDIIDVISEKYNIDLNKKKFKGMYGDGTIANEKVILLKPLTYMNLSGESIKEVTDFYKIPKENVIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAHF-GSDVFPRIKVGVGQPV-QRDLVSHVLGKFNKDDREILSKVFEAASDAAENIIEKGTAEAMNKFNGFK 187
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SYNJB (Peptidyl-tRNA hydrolase OS=Synechococcus sp. GN=pth PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.369e-40 Identity = 90/196 (45.92%), Postives = 119/196 (60.71%), Query Frame = 1 Query: 118 KPKQQQQHPW-LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGIS-VSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 KPK+ + L+VGLGNPG QY TRHN GF +VD +A+ GI V F+ +G+GF L KP+T+MN SGQSV +++ +YK+ L VLV++DD+DLP ++RL G GGHNGM+SII H GS FPRLR+G+G+P G D V VL F+ E++ L+ VEAV EG A N Sbjct: 5 KPKEVDEISLQLVVGLGNPGPQYANTRHNCGFMVVDRLAQRWGIPLVLEKRFQGSYGEGFALGGKRRLLKPETYMNRSGQSVRAVLDWYKLDLASVLVVYDDMDLPLGRLRLRGSGSAGGHNGMKSIIQHL-GSEAFPRLRLGVGKPKGSQDVVGHVLGGFAPAEQEVLERVLDVAVEAVECCWQEGLRTAMNRFN 199
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_BACP2 (Peptidyl-tRNA hydrolase OS=Bacillus pumilus (strain SAFR-032) GN=pth PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.369e-40 Identity = 83/174 (47.70%), Postives = 112/174 (64.37%), Query Frame = 1 Query: 154 VGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGF 675 VGLGNPGK+Y TRHNVGF +D +++ I ++ F FG GF+ V+L KP T+MN SG+ V ++ YY IPL+ + VI+DDLDLP ++RL KG GGHNG++S+I H GS EF R RIGIGRP M V++VL FS++E+ ++ Q VEA L + F Sbjct: 5 VGLGNPGKEYEKTRHNVGFMTIDELSKKWDIPLNQSKFHGQFGTGFVSGQKVLLVKPLTYMNLSGECVRPLMDYYDIPLEHLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQHL-GSPEFDRFRIGIGRPQNGMKVVDYVLGRFSEEEQPDIASAIQASVEACEAALTKPF 177
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SYNJA (Peptidyl-tRNA hydrolase OS=Synechococcus sp. (strain JA-3-3Ab) GN=pth PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.041e-40 Identity = 86/185 (46.49%), Postives = 114/185 (61.62%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVS-SVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 LIVGLGNPG QY TRHN GF +VD +AE GI ++ F+ +G+GF L KP+T+MN SG++V +++ +YK+ VLV++DD+DLP ++RL G GGHNGM+S+I+H GS FPRLR+G+GRP G D V VL F E+ LD + V AV L EG A N Sbjct: 16 LIVGLGNPGPQYANTRHNCGFMVVDQLAERWGIPLALEKRFQGSYGEGFALGGKRRLLKPETYMNRSGEAVRAVLDWYKLDPASVLVVYDDMDLPLGRLRLRGSGSAGGHNGMKSVIEHL-GSEAFPRLRLGVGRPKGNQDRVGHVLGSFEPAEQAVLDRVLRAAVAAVECCLQEGLKTAMNRFN 199
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_FRASC (Peptidyl-tRNA hydrolase OS=Frankia sp. (strain CcI3) GN=pth PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.893e-40 Identity = 78/181 (43.09%), Postives = 115/181 (63.54%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKA 684 PWL+ GLGNPG Y G RHN GF +VD +AE G + S +A + + +LA+P +FMN SG V + S+YK+ + +++V+ D+LD+PF +RL GG GHNG+RSI G+R++ R+R+GIGRPPG+MD +FVLR F+ ER+EL + ++V +L+ +G A Sbjct: 10 PWLVAGLGNPGPTYAGNRHNAGFMVVDLLAERTGSRLKSHRSRADVAETRLAGARAVLARPLSFMNLSGGPVAAARSFYKVEVSRLIVVHDELDIPFGAVRLKRGGGDNGHNGLRSISSAL-GTRDYLRVRVGIGRPPGRMDPADFVLRDFTSTERRELPLLLEHAADSVEMLIADGLEPA 189
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_ANASK (Peptidyl-tRNA hydrolase OS=Anaeromyxobacter sp. (strain K) GN=pth PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.893e-40 Identity = 82/184 (44.57%), Postives = 122/184 (66.30%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 L+VGLGNPG++Y TRHNVGF + D +A+ G S S+ F A + +G V + KPQT+MN SG++VG+ + ++K+ L ++V+ DDL+L +++L GGHGGHNG++S+ H GS E+ R+R+G+GRPP +MD ++VL F+K E ELD +Q VEA R+ + G +A VN Sbjct: 3 LVVGLGNPGEEYARTRHNVGFVVADRLAQLAGASFSAKKFAAELAEARLGPERVWIMKPQTYMNHSGEAVGAALRFWKLGLDDLVVVHDDLELDPYRVQLKVGGGHGGHNGVKSVNAHV-GSPEYARVRVGVGRPPPRMDPADYVLGKFAKGEDAELDLCVEQAVEATRLAVELGAARAMNQVN 185 The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bpback to top |