FC873342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SOLUE (Peptidyl-tRNA hydrolase OS=Solibacter usitatus (strain Ellin6076) GN=pth PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.030e-35 Identity = 82/189 (43.39%), Postives = 115/189 (60.85%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAKP 711 +L+ GLGNPG+QY + HN+GF +VD +AE GI V+ + KA G G I VMLAKPQTFMN SG+S+ ++ ++I + ++VI+D+LDLP+ +++ PKG GHNGM+S+I FK S E R+R+GI FVL P + + +ELD +AVR + EG KA T N P Sbjct: 2 FLLAGLGNPGEQYALSPHNLGFLVVDRLAEQFGIRVTRKDSKALIGLGEIDGHQVMLAKPQTFMNLSGESLAPLMEKHQIEISNLVVIYDELDLPWGALKIKPKGSAAGHNGMKSVIQWFKTS-EIVRVRLGIHPGHPIRSGAEFVLAPIKRSQMKELDEFVGFAADAVRTITAEGVEKAMTKFNRRAP 189
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRA5 (Peptidyl-tRNA hydrolase OS=Streptococcus agalactiae serotype V GN=pth PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.345e-35 Identity = 72/154 (46.75%), Postives = 103/154 (66.88%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQE 606 +IVGLGNPG +YN T+HN+GF VD I + ++ + NFKA G FI + KP TFMN SG +V ++++YY I +K +++I+DDLD+ K+R KG GGHNG++SII H G++EF R+++GIGRP G+M +N VL F K + Sbjct: 4 MIVGLGNPGSKYNDTKHNIGFMAVDRIVKDLDVNFTEDKNFKAEIGSDFINGEKIYFIKPTTFMNNSGIAVKALLTYYNISIKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAHL-GTQEFDRIKVGIGRPNGRMTVINHVLGKFDKND 156
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRA3 (Peptidyl-tRNA hydrolase OS=Streptococcus agalactiae serotype III GN=pth PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.345e-35 Identity = 72/154 (46.75%), Postives = 103/154 (66.88%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQE 606 +IVGLGNPG +YN T+HN+GF VD I + ++ + NFKA G FI + KP TFMN SG +V ++++YY I +K +++I+DDLD+ K+R KG GGHNG++SII H G++EF R+++GIGRP G+M +N VL F K + Sbjct: 4 MIVGLGNPGSKYNDTKHNIGFMAVDRIVKDLDVNFTEDKNFKAEIGSDFINGEKIYFIKPTTFMNNSGIAVKALLTYYNISIKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAHL-GTQEFDRIKVGIGRPNGRMTVINHVLGKFDKND 156
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_MYCGI (Peptidyl-tRNA hydrolase OS=Mycobacterium gilvum (strain PYR-GCK) GN=pth PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.345e-35 Identity = 79/192 (41.15%), Postives = 113/192 (58.85%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGF------IGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 P L+VGLGNPG QY TRHN+GF + D +A+ G + FK H G + PV+LAKP+ +MN SG+ VG + +Y I V++I D+LD+ F ++RL GG GHNG+RS + + +F R+R+GIGRPPG+ +FVL PF+ +ER EL +Q +A +L+ G A V+ Sbjct: 4 PVLVVGLGNPGPQYATTRHNIGFMVADVLADRMGET-----FKVHKKSGAEVTTGRLAGRPVVLAKPRVYMNESGRQVGPLAKFYSIAPTDVVIIHDELDIDFGRIRLKAGGGVAGHNGLRS-VGSALSTNDFQRVRVGIGRPPGQKSGASFVLEPFNSRERPELGTIIEQAADATELLIELGIEPAQNTVH 189
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_MOOTA (Peptidyl-tRNA hydrolase OS=Moorella thermoacetica (strain ATCC 39073) GN=pth PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.345e-35 Identity = 78/175 (44.57%), Postives = 112/175 (64.00%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEG 672 ++VGLGNPG +Y TRHN GF +VD +A+ GI++ +A G+G +GN V+L KPQT+MN SGQ+V + +Y I + +LVI DDLDL ++RL G GGH G++SII H G+ PRL+IGIGRPP + +++VL+PFS+ + + + + A R LL G Sbjct: 6 MVVGLGNPGPRYATTRHNAGFMVVDLLADDLGITLDRTREQALTGQGLVGNNRVLLVKPQTYMNNSGQAVAPLARWYGIAPEAILVIHDDLDLAPGRLRLRRGGSSGGHRGLQSIITHL-GTTAVPRLKIGIGRPPLGQNVIDYVLKPFSEGDWELIRPVLLEAARAARFLLEGG 179
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_LISMO (Peptidyl-tRNA hydrolase OS=Listeria monocytogenes GN=pth PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.345e-35 Identity = 74/168 (44.05%), Postives = 108/168 (64.29%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAV 651 LI GLGNPGK+Y TRHNVGF +VD ++ F + +G ++L KP TFMNASG+ + ++ YY IP++ V++++DDLDLP K+RL KG GGHNGM+SII H K ++EF R+R+G+ RP K + +N+VL F K E+ ++ Q+ +A+ Sbjct: 3 LIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVKPLTFMNASGECIRPLMDYYNIPIEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQHVK-TQEFNRIRVGVSRPL-KGEVINYVLGDFPKAEQPDIIAAIQKSADAI 168
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_CLOK5 (Peptidyl-tRNA hydrolase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=pth PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.345e-35 Identity = 75/188 (39.89%), Postives = 123/188 (65.43%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 +LIVGLGN G +Y+ TRHN+GF+ +D +++ I+++ FK ++G+GFIG V+L KP T+MN SG+SV V++YKI ++++I+DD+D+ + R+ +G GGHNG+++II + G+ FPR++IGIG P +D V++VL FS+ +R ++ + VEA+ ++ G A N K Sbjct: 2 FLIVGLGNIGVKYHRTRHNIGFDFIDLVSKKYNITLNREKFKGNYGEGFIGQNKVILLKPGTYMNLSGESVREAVNFYKIENDRMIIIYDDIDIDIGRFRIRHRGSAGGHNGIKNIILNL-GTDVFPRIKIGIGHP--NVDLVSYVLGKFSEDDRINIEKVLKTSVEALECIMDFGIEVAMNKFNGFK 186
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_CLOK1 (Peptidyl-tRNA hydrolase OS=Clostridium kluyveri (strain NBRC 12016) GN=pth PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.345e-35 Identity = 75/188 (39.89%), Postives = 123/188 (65.43%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 +LIVGLGN G +Y+ TRHN+GF+ +D +++ I+++ FK ++G+GFIG V+L KP T+MN SG+SV V++YKI ++++I+DD+D+ + R+ +G GGHNG+++II + G+ FPR++IGIG P +D V++VL FS+ +R ++ + VEA+ ++ G A N K Sbjct: 2 FLIVGLGNIGVKYHRTRHNIGFDFIDLVSKKYNITLNREKFKGNYGEGFIGQNKVILLKPGTYMNLSGESVREAVNFYKIENDRMIIIYDDIDIDIGRFRIRHRGSAGGHNGIKNIILNL-GTDVFPRIKIGIGHP--NVDLVSYVLGKFSEDDRINIEKVLKTSVEALECIMDFGIEVAMNKFNGFK 186
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_BACSK (Peptidyl-tRNA hydrolase OS=Bacillus clausii (strain KSM-K16) GN=pth PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.345e-35 Identity = 74/176 (42.05%), Postives = 115/176 (65.34%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGF 675 L+VGLGNPGK+Y TRHN+GF+++D A+ + + FKA +G+ IG+ V+L KP T+MN SG++V + Y+ I +++VI+DDLDLP K+RL KG GGHNG++S+I H G+ +F R+R+GIGRP V++VL + K+E ++ ++ +A+ L + F Sbjct: 3 LVVGLGNPGKKYEHTRHNIGFDIIDRCAQKLDLPLDKQKFKAIYGEKRIGSEKVVLLKPLTYMNLSGEAVRPFMDYFNISNDELVVIYDDLDLPVGKIRLRKKGSAGGHNGIKSLIAHL-GTEDFNRIRVGIGRPAHGEPVVHYVLDTYRKEELAFMNEAAEKSAKAIEAWLEKPF 177
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRPZ (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=pth PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.757e-35 Identity = 76/175 (43.43%), Postives = 112/175 (64.00%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLE 669 +IVGLGNPG +Y T+HN+GF +D I + ++ + NFKA G FI + V KP TFMN SG +V ++++YY I + ++VI+DDLD+ SK+RL KG GGHNG++SII H G++EF R+++GIGRP M +N V+ F+ ++ + T + V AV+ L E Sbjct: 4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQE 177 The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bpback to top |