FC873342

Overview
NameFC873342
Unique NameFC873342
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length844
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRPM (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M28 GN=pth PE=3 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.757e-35
Identity = 76/175 (43.43%), Postives = 112/175 (64.00%), Query Frame = 1
Query:  148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLE 669
            +IVGLGNPG +Y  T+HN+GF  +D I +   ++ +   NFKA  G  FI +  V   KP TFMN SG +V ++++YY I +  ++VI+DDLD+  SK+RL  KG  GGHNG++SII H  G++EF R+++GIGRP   M  +N V+  F+ ++   +  T  + V AV+  L E
Sbjct:    4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQE 177          
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRPD (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=pth PE=3 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.757e-35
Identity = 76/175 (43.43%), Postives = 112/175 (64.00%), Query Frame = 1
Query:  148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLE 669
            +IVGLGNPG +Y  T+HN+GF  +D I +   ++ +   NFKA  G  FI +  V   KP TFMN SG +V ++++YY I +  ++VI+DDLD+  SK+RL  KG  GGHNG++SII H  G++EF R+++GIGRP   M  +N V+  F+ ++   +  T  + V AV+  L E
Sbjct:    4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQE 177          
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRPC (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=pth PE=3 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.757e-35
Identity = 76/175 (43.43%), Postives = 112/175 (64.00%), Query Frame = 1
Query:  148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLE 669
            +IVGLGNPG +Y  T+HN+GF  +D I +   ++ +   NFKA  G  FI +  V   KP TFMN SG +V ++++YY I +  ++VI+DDLD+  SK+RL  KG  GGHNG++SII H  G++EF R+++GIGRP   M  +N V+  F+ ++   +  T  + V AV+  L E
Sbjct:    4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQE 177          
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRPB (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=pth PE=3 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.757e-35
Identity = 76/175 (43.43%), Postives = 112/175 (64.00%), Query Frame = 1
Query:  148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLE 669
            +IVGLGNPG +Y  T+HN+GF  +D I +   ++ +   NFKA  G  FI +  V   KP TFMN SG +V ++++YY I +  ++VI+DDLD+  SK+RL  KG  GGHNG++SII H  G++EF R+++GIGRP   M  +N V+  F+ ++   +  T  + V AV+  L E
Sbjct:    4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQE 177          
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRP3 (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M3 GN=pth PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.757e-35
Identity = 76/175 (43.43%), Postives = 112/175 (64.00%), Query Frame = 1
Query:  148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLE 669
            +IVGLGNPG +Y  T+HN+GF  +D I +   ++ +   NFKA  G  FI +  V   KP TFMN SG +V ++++YY I +  ++VI+DDLD+  SK+RL  KG  GGHNG++SII H  G++EF R+++GIGRP   M  +N V+  F+ ++   +  T  + V AV+  L E
Sbjct:    4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVCFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQE 177          
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRP1 (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M1 GN=pth PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.757e-35
Identity = 76/175 (43.43%), Postives = 112/175 (64.00%), Query Frame = 1
Query:  148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLE 669
            +IVGLGNPG +Y  T+HN+GF  +D I +   ++ +   NFKA  G  FI +  V   KP TFMN SG +V ++++YY I +  ++VI+DDLD+  SK+RL  KG  GGHNG++SII H  G++EF R+++GIGRP   M  +N V+  F+ ++   +  T  + V AV+  L E
Sbjct:    4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQE 177          
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_RENSM (Peptidyl-tRNA hydrolase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=pth PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.757e-35
Identity = 77/191 (40.31%), Postives = 117/191 (61.26%), Query Frame = 1
Query:  145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIG--NVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPP-GKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708
            WL+VGLGNPG  Y+ TRHN+GF + + +A   G S  S   +A   +G +G     ++LAKPQTFMN SG    ++  +Y +    V+ + D++D+PF+ ++L   GG GGHNG+R  I    G++E+ R+R+G+GRPP G+ D+   VL+ FS  E++EL F  Q   +AV +L+ +G   A    + AK
Sbjct:    5 WLVVGLGNPGPDYSHTRHNIGFMVAEELASRIGASFKSNKSRALVAEGRLGMGGPKLVLAKPQTFMNLSGGPTSALAKFYDLGADNVIAVQDEIDIPFNTIKLKIGGGEGGHNGLRD-ISKALGAKEYLRVRVGVGRPPGGQGDAAGHVLKVFSTAEKKELPFLIQDAADAVELLISDGLLAAQQKFHPAK 194          
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_MYCVP (Peptidyl-tRNA hydrolase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=pth PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.757e-35
Identity = 77/192 (40.10%), Postives = 111/192 (57.81%), Query Frame = 1
Query:  142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAH------FGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699
            P L+VGLGNPG QY  TRHN GF +VD +A+  G       FK H         G +   PV+LAKP+ +MN SG+ VG +  +Y +    V+++ D+LD+ F ++RL   GG  GHNG+RS+     G  +F R+R+GIGRPPG     +FVL  F+  ER+E+    +Q  +A  +L+ +G   A   V+
Sbjct:    4 PVLVVGLGNPGPQYATTRHNAGFMVVDILADRMG-----EKFKVHKKSGAEVATGRLAGRPVVLAKPRVYMNESGRQVGPLAKFYSVAPADVVIVHDELDIDFGRIRLKAGGGVAGHNGLRSVASAL-GGNDFQRVRVGIGRPPGHKSGASFVLENFNSVERKEVPTILEQAADATELLVAQGLEPAQNTVH 189          
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_GEOTN (Peptidyl-tRNA hydrolase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=pth PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.757e-35
Identity = 71/154 (46.10%), Postives = 103/154 (66.88%), Query Frame = 1
Query:  148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQER 609
            L VGLGNPGK+Y  TRHN+GF ++D +A+   +S+ +  F+  FG   +    V L KP T+MN SG+ V  ++ +Y I +  V++I+DDLDLP  K+RL  KGG GGHNG++SII H  G+ +F R+RIGIGRP       ++VL  F+++E+
Sbjct:    3 LFVGLGNPGKEYEQTRHNIGFFVIDELAKRWNVSLKTAKFRGLFGTASVFGEKVALCKPLTYMNLSGECVCPLIDFYDIAVDDVIIIYDDLDLPPGKIRLRLKGGSGGHNGVKSIIHHL-GTEQFKRIRIGIGRPTNGQPVADYVLSRFTEEEK 155          
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_EUBR3 (Peptidyl-tRNA hydrolase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=pth PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.295e-35
Identity = 74/186 (39.78%), Postives = 121/186 (65.05%), Query Frame = 1
Query:  145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKI-PLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699
            ++IVGLGNP K+Y  TRHN+GF+++DA+A+   ISV+    KA  G G I  + V+L KPQT+MN SG+SV  ++++YK+ P ++++VIFDD+ L   ++R+  KG  GGHNG++SII    G++ F R+++G+G  P   D  + VL  FS ++R +++      ++A  +++    +KA    N
Sbjct:    2 YVIVGLGNPDKKYEHTRHNIGFDVIDALADKYNISVTDKKHKALCGSGVIEGMKVLLVKPQTYMNLSGESVAEVMNFYKLDPDEEMIVIFDDISLEPGRIRIRKKGSAGGHNGIKSII-AMTGTQGFSRIKVGVGEKPQGWDLADHVLGRFSSEDRAKVEEAIGHAMDAAVLMMQGETDKAMNIYN 186          
The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PTH_STRPM1.757e-3543.43Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes ... [more]
PTH_STRPD1.757e-3543.43Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes ... [more]
PTH_STRPC1.757e-3543.43Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes ... [more]
PTH_STRPB1.757e-3543.43Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes ... [more]
PTH_STRP31.757e-3543.43Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes ... [more]
PTH_STRP11.757e-3543.43Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes ... [more]
PTH_RENSM1.757e-3540.31Peptidyl-tRNA hydrolase OS=Renibacterium salmonina... [more]
PTH_MYCVP1.757e-3540.10Peptidyl-tRNA hydrolase OS=Mycobacterium vanbaalen... [more]
PTH_GEOTN1.757e-3546.10Peptidyl-tRNA hydrolase OS=Geobacillus thermodenit... [more]
PTH_EUBR32.295e-3539.78Peptidyl-tRNA hydrolase OS=Eubacterium rectale (st... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BF10FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BF10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bp
AAGCATTCTCCTTTGTGCTGTTGGGGAAGACGAACAAGGATGTCTCGGTC
GCCATCAAATTCCACAATTAGGAATTTTTCATCATCAATAAGCAACGAAG
AATCTTTGGTTTCACCTAAGCCAAAGCAGCAGCAACAGCACCCGTGGCTC
ATTGTTGGGCTCGGTAACCCCGGCAAGCAGTACAATGGCACTCGACACAA
TGTGGGATTTGAAATGGTGGATGCAATTGCTGAAGCTGAAGGAATATCTG
TGAGCTCTGTTAATTTTAAAGCCCATTTTGGAAAAGGTTTTATCGGAAAT
GTTCCAGTAATGCTTGCGAAACCACAAACTTTTATGAACGCAAGTGGTCA
GTCTGTTGGGTCCATTGTATCCTATTACAAGATTCCATTGAAGCAAGTAC
TCGTGATATTCGATGACTTAGATTTGCCTTTTTCCAAAATGCGTCTGCTG
CCAAAAGGTGGACATGGAGGACACAATGGCATGAGGAGTATCATTGACCA
CTTTAAAGGGAGCCGTGAATTTCCTCGTTTAAGAATTGGGATTGGACGGC
CACCTGGGAAAATGGATAGTGTAAATTTTGTGCTTCGCCCTTTCAGTAAA
CAAGAGCGTCAAGAGTTGGATTTTACATTTCAACAAGGTGTTGAAGCAGT
GCGGATTCTTTTGCTTGAAGGTTTTAATAAAGCCGCTACATTTGTTAACA
CAGCAAAGCCAATGGAACAACTTAGTTAACTTACTGGTAAGTTATCATTA
TTTTTGTAATTACAAGTGGATGTGCTCGGGGAAAAGTGATTATGCATTGT
ATCAATCCTTGTTCCCCTTGTGAGACAAACTGGGGTAATCGATG
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