FC873342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STACT (Peptidyl-tRNA hydrolase OS=Staphylococcus carnosus (strain TM300) GN=pth PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.997e-35 Identity = 72/167 (43.11%), Postives = 107/167 (64.07%), Query Frame = 1 Query: 151 IVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAV 651 IVGLGN GK++ T+HN+GFE++D + E+ + F+ + +G V+L +P T MN SG++VG ++ YY + + +LV++DDLDLP ++RL KG GGHNGM+SII H G+ F R+RIGIGRP M ++VL+ FSKQE + ++ + AV Sbjct: 4 IVGLGNIGKRFEQTKHNIGFEVIDYLLESNQFKLDKQKFRGAYTIERLGGEKVLLIEPMTMMNLSGEAVGPLMDYYNVDPEDLLVLYDDLDLPQGQVRLRQKGSAGGHNGMKSIIQHL-GTDNFKRIRIGIGRPTNGMSVPDYVLQKFSKQEMETMNKVIEHSAHAV 169
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_MYCTU (Peptidyl-tRNA hydrolase OS=Mycobacterium tuberculosis GN=pth PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.997e-35 Identity = 79/192 (41.15%), Postives = 112/192 (58.33%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAH------FGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 P L+VGLGNPG Y TRHN+GF + D +A G FKAH G ++LAKP+ +MN SG+ +G + +Y + ++VI DDLDL F ++RL GG GGHNG+RS++ G+++F R+RIGIGRPPG+ D FVL F+ ER E+ +Q +A +L+ +G A V+ Sbjct: 4 PLLVVGLGNPGANYARTRHNLGFVVADLLAARLG-----AKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEPAQNRVH 189
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_MYCTA (Peptidyl-tRNA hydrolase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=pth PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.997e-35 Identity = 79/192 (41.15%), Postives = 112/192 (58.33%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAH------FGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 P L+VGLGNPG Y TRHN+GF + D +A G FKAH G ++LAKP+ +MN SG+ +G + +Y + ++VI DDLDL F ++RL GG GGHNG+RS++ G+++F R+RIGIGRPPG+ D FVL F+ ER E+ +Q +A +L+ +G A V+ Sbjct: 4 PLLVVGLGNPGANYARTRHNLGFVVADLLAARLG-----AKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEPAQNRVH 189
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_MYCBT (Peptidyl-tRNA hydrolase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=pth PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.997e-35 Identity = 79/192 (41.15%), Postives = 112/192 (58.33%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAH------FGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 P L+VGLGNPG Y TRHN+GF + D +A G FKAH G ++LAKP+ +MN SG+ +G + +Y + ++VI DDLDL F ++RL GG GGHNG+RS++ G+++F R+RIGIGRPPG+ D FVL F+ ER E+ +Q +A +L+ +G A V+ Sbjct: 4 PLLVVGLGNPGANYARTRHNLGFVVADLLAARLG-----AKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEPAQNRVH 189
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_MYCBP (Peptidyl-tRNA hydrolase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=pth PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.997e-35 Identity = 79/192 (41.15%), Postives = 112/192 (58.33%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAH------FGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 P L+VGLGNPG Y TRHN+GF + D +A G FKAH G ++LAKP+ +MN SG+ +G + +Y + ++VI DDLDL F ++RL GG GGHNG+RS++ G+++F R+RIGIGRPPG+ D FVL F+ ER E+ +Q +A +L+ +G A V+ Sbjct: 4 PLLVVGLGNPGANYARTRHNLGFVVADLLAARLG-----AKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEPAQNRVH 189
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_MYCBO (Peptidyl-tRNA hydrolase OS=Mycobacterium bovis GN=pth PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.997e-35 Identity = 79/192 (41.15%), Postives = 112/192 (58.33%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAH------FGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 P L+VGLGNPG Y TRHN+GF + D +A G FKAH G ++LAKP+ +MN SG+ +G + +Y + ++VI DDLDL F ++RL GG GGHNG+RS++ G+++F R+RIGIGRPPG+ D FVL F+ ER E+ +Q +A +L+ +G A V+ Sbjct: 4 PLLVVGLGNPGANYARTRHNLGFVVADLLAARLG-----AKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEPAQNRVH 189
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_CALS8 (Peptidyl-tRNA hydrolase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=pth PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.997e-35 Identity = 73/185 (39.46%), Postives = 115/185 (62.16%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 ++I GLGNPG++Y TRHN GF +D +A+A V + FK G + V+L KP T+MN+SG S+ V++YK+ ++++VI+DD+ +++ KG GGHNG++SII G+ EFPR+RIGIG P K D V +VL F E+Q++ ++ + ++ILL G ++A ++N Sbjct: 3 YIIAGLGNPGERYTFTRHNAGFLAIDYLAQAFNTKVDKIKFKGLTGSFEYADKKVLLLKPMTYMNSSGDSIVEAVNFYKVKPEKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQRL-GTEEFPRIRIGIGVP--KEDMVKYVLSEFEDYEKQKIFRAIEKAAQGIKILLESGIDRAMNYIN 184
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SYMTH (Peptidyl-tRNA hydrolase OS=Symbiobacterium thermophilum GN=pth PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.914e-35 Identity = 81/187 (43.32%), Postives = 111/187 (59.36%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVP--VMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNT 702 LIVGLGNPG +Y TRHN G+ ++DA A G+++ F+ +G+ G V+L KP T+MN SG+SV +Y+I +LV+FDDLDL ++RL KG GGHNG++S+I G+ EFPRLRIGIGRP + +++VL PF + + + VEAV L EG A NT Sbjct: 4 LIVGLGNPGPRYAATRHNAGWMLLDAFARKHGVAIEQRGFEGLYGELRWGAEAEKVILLKPLTYMNLSGRSVAQAARFYRIAPADILVLFDDLDLEPGRLRLRAKGSAGGHNGVKSVIAEL-GTAEFPRLRIGIGRPAPGWEVIDWVLAPFGPDDAAAVAAALPRAVEAVECFLTEGILAAMNRYNT 189
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_ANADF (Peptidyl-tRNA hydrolase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=pth PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.914e-35 Identity = 76/184 (41.30%), Postives = 115/184 (62.50%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 L+VGLGNPG +Y TRHNVGF + D +A A + F + +G G V + KPQT+MN SG+SVGS + ++K+ L+ ++V+ DDL+L +++L GGHGGHNG++S+ H G ++ R+R+G+GRPP +MD ++VL F+K + L+ + EA R+ + G KA VN Sbjct: 3 LVVGLGNPGPEYARTRHNVGFLVADRLALALRAEFTLRKFASELAEGRAGGERVWIMKPQTYMNHSGESVGSALHFWKLGLEDLVVVHDDLELEPFRVQLKVGGGHGGHNGLKSVNAHV-GGPDYARVRVGVGRPPPRMDPADYVLGRFAKADEAPLEECLVRATEAARLAIELGAAKAMNQVN 185
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_LISMH (Peptidyl-tRNA hydrolase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=pth PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35 Identity = 73/168 (43.45%), Postives = 108/168 (64.29%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAV 651 LI GLGNPGK+Y TRHNVGF +VD ++ F + +G ++L KP TFMNASG+ + ++ YY IP++ V++++DDLDLP K+RL KG GGHNGM+SII H K ++EF R+R+G+ RP K + +++VL F K E+ ++ Q+ +A+ Sbjct: 3 LIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVKPLTFMNASGECIRPLMDYYNIPIEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQHVK-TQEFNRIRVGVSRPL-KGEVIHYVLGDFPKAEQPDIIAAIQKSADAI 168 The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bpback to top |