FC873342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_LISMF (Peptidyl-tRNA hydrolase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=pth PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35 Identity = 73/168 (43.45%), Postives = 108/168 (64.29%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAV 651 LI GLGNPGK+Y TRHNVGF +VD ++ F + +G ++L KP TFMNASG+ + ++ YY IP++ V++++DDLDLP K+RL KG GGHNGM+SII H K ++EF R+R+G+ RP K + +++VL F K E+ ++ Q+ +A+ Sbjct: 3 LIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVKPLTFMNASGECIRPLMDYYNIPIEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQHVK-TQEFNRIRVGVSRPL-KGEVIHYVLGDFPKAEQPDIIAAIQKSADAI 168
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_LISMC (Peptidyl-tRNA hydrolase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=pth PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35 Identity = 73/168 (43.45%), Postives = 108/168 (64.29%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAV 651 LI GLGNPGK+Y TRHNVGF +VD ++ F + +G ++L KP TFMNASG+ + ++ YY IP++ V++++DDLDLP K+RL KG GGHNGM+SII H K ++EF R+R+G+ RP K + +++VL F K E+ ++ Q+ +A+ Sbjct: 3 LIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVKPLTFMNASGECIRPLMDYYNIPIEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQHVK-TQEFNRIRVGVSRPL-KGEVIHYVLGDFPKAEQPDIIAAIQKSADAI 168
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_KINRD (Peptidyl-tRNA hydrolase OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=pth PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35 Identity = 74/187 (39.57%), Postives = 112/187 (59.89%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVP-------VMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKA 684 WL+VGLGNPG +Y TRHNVG ++D +A S A + +G P V+LA P ++MN SG V + Y+ + ++ ++V+ D+LD+PF +RL GG GGHNG+RSI G +++ R+R+GIGRPPG+ D +FVL+ FS E++++ F +AV L+++GF A Sbjct: 5 WLVVGLGNPGAEYERTRHNVGQMVLDELASRTRGSFKRHRTGARTAEVRLGVAPGGAPGPRVVLAAPTSYMNVSGGPVAGLAKYFDVDVEHLVVVHDELDVPFGSVRLKRGGGEGGHNGLRSISKSL-GDKDYARVRVGIGRPPGRQDPADFVLKEFSSTEKKDMPFLVMDAADAVEELVIKGFEAA 190
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_ARTAT (Peptidyl-tRNA hydrolase OS=Arthrobacter aurescens (strain TC1) GN=pth PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35 Identity = 74/190 (38.95%), Postives = 117/190 (61.58%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEG--ISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 WLIVGLGNPG +Y+ RHNVG ++D +A G V + G+ IG V+LAKP T+MN SG V + +++ I V+ + D++D+PF+ ++L GG GGHNG+R I ++++ R+R+G+GRPPG+M++ ++VLR F+ E++EL F + +AV +L+ +G A + AK Sbjct: 5 WLIVGLGNPGSEYSNNRHNVGQMVLDELASRMGGKFKVHKARAQVVEGRLGIGGPRVVLAKPMTYMNVSGGPVAGLCNFFDIAPDHVIAVHDEIDIPFNTVKLKMGGGEGGHNGLRD-ISKALATKDYLRVRVGVGRPPGRMETADYVLRDFATAEKKELPFLLDEAADAVELLMDQGLLAAQQKHHPAK 193
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRPG (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=pth PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.677e-35 Identity = 75/175 (42.86%), Postives = 112/175 (64.00%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLE 669 +IVGLGNPG +Y T+HN+GF +D I + ++ + NFKA G FI + V KP TFMN SG +V ++++YY I + ++VI+DDLD+ SK+RL KG GGHNG++SII H G++EF R+++GIGRP M ++ V+ F+ ++ + T + V AV+ L E Sbjct: 4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVISHVMGQFNTEDNIAISLTLDRVVNAVKFYLQE 177
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRPF (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=pth PE=3 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 6.677e-35 Identity = 75/175 (42.86%), Postives = 112/175 (64.00%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLE 669 +IVGLGNPG +Y T+HN+GF +D I + ++ + NFKA G FI + V KP TFMN SG +V ++++YY I + ++VI+DDLD+ SK+RL KG GGHNG++SII H G++EF R+++GIGRP M ++ V+ F+ ++ + T + V AV+ L E Sbjct: 4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVISHVMGQFNTEDNIAISLTLDRVVNAVKFYLQE 177
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRP8 (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M18 GN=pth PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.677e-35 Identity = 75/175 (42.86%), Postives = 112/175 (64.00%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLE 669 +IVGLGNPG +Y T+HN+GF +D I + ++ + NFKA G FI + V KP TFMN SG +V ++++YY I + ++VI+DDLD+ SK+RL KG GGHNG++SII H G++EF R+++GIGRP M ++ V+ F+ ++ + T + V AV+ L E Sbjct: 4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVISHVMGQFNTEDNIAISLTLDRVVNAVKFYLQE 177
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRP6 (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M6 GN=pth PE=3 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 6.677e-35 Identity = 75/175 (42.86%), Postives = 112/175 (64.00%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLE 669 +IVGLGNPG +Y T+HN+GF +D I + ++ + NFKA G FI + V KP TFMN SG +V ++++YY I + ++VI+DDLD+ SK+RL KG GGHNG++SII H G++EF R+++GIGRP M ++ V+ F+ ++ + T + V AV+ L E Sbjct: 4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVISHVMGQFNTEDNIAISLTLDRVVNAVKFYLQE 177
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRAW (Peptidyl-tRNA hydrolase OS=Streptomyces avermitilis GN=pth PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.677e-35 Identity = 77/193 (39.90%), Postives = 115/193 (59.59%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVN-FKAHFGKGFIG-----NVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNT 702 PWLIVGLGNPG +Y RHNVGF + D +AE G +A +G IG N V+LAKP ++MN SG V ++ +YK+P+ ++ + D+LD+ + +RL GG GHNG++S+ ++ R+R GIGRPPG+M +FVL+ F+ ER+ELD+ + +A L++EG +A N+ Sbjct: 13 PWLIVGLGNPGPEYARNRHNVGFMVADLLAERIGGKFKRAGKAQAQVIEGRIGPPGPANRRVILAKPMSYMNLSGGPVNALREFYKVPVANIVAVHDELDIDYGVLRLKLGGGDNGHNGLKSMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFASAERKELDYLVDRAADAAECLVIEGLERAQGTYNS 203
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_GEOUR (Peptidyl-tRNA hydrolase OS=Geobacter uraniireducens (strain Rf4) GN=pth PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.677e-35 Identity = 80/184 (43.48%), Postives = 114/184 (61.96%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 LIVGLGNPG +Y TRHN GF ++D ++ GI+V+ NF G+G ++L KPQTFMN SG+SV + ++K+ ++ ++VI DDLD+PF +++L GGH GHNG+RS+ GS F R+R+GIGRP D VN+VL FS +E L V+ + +L+ EG K + N Sbjct: 5 LIVGLGNPGPKYQWTRHNAGFMVLDRLSHLTGITVTRKNFSGLCGEGSWQGDRLILLKPQTFMNLSGRSVAEALRFHKLTVEDLIVIHDDLDIPFGRVKLKAGGGHAGHNGLRSLSQEL-GSGAFLRVRMGIGRPL-HGDVVNYVLSNFSPEEMIGLPRLLDGIVDLLEMLITEGLPKTMSLYN 186 The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bpback to top |