FC873342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_ANADE (Peptidyl-tRNA hydrolase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=pth PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.893e-40 Identity = 82/184 (44.57%), Postives = 122/184 (66.30%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 L+VGLGNPG++Y TRHNVGF + D +A+ G S ++ F A + +G V + KPQT+MN SG++VG+ + ++K+ L ++V+ DDL+L +++L GGHGGHNG++S+ H GS E+ R+R+G+GRPP +MD ++VL F+K E ELD +Q VEA R+ + G KA VN Sbjct: 3 LVVGLGNPGEEYARTRHNVGFVVADRLAQLAGASFTAKKFAAELAEARLGPERVWILKPQTYMNHSGEAVGAALRFWKLGLDDLVVVHDDLELEPFRVQLKVGGGHGGHNGVKSVNAHV-GSPEYARVRVGVGRPPPRMDPADYVLGKFAKGEDAELDLCVEQAVEATRLAVELGAAKAMNQVN 185
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_ANAD2 (Peptidyl-tRNA hydrolase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=pth PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.893e-40 Identity = 82/184 (44.57%), Postives = 122/184 (66.30%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 L+VGLGNPG++Y TRHNVGF + D +A+ G S S+ F A + +G V + KPQT+MN SG++VG+ + ++K+ L ++V+ DDL+L +++L GGHGGHNG++S+ H GS E+ R+R+G+GRPP +MD ++VL F+K E ELD +Q VEA R+ + G +A VN Sbjct: 3 LVVGLGNPGEEYARTRHNVGFVVADRLAQLAGASFSAKKFAAELAEARLGPERVWIMKPQTYMNHSGEAVGAALRFWKLGLDDLVVVHDDLELDPYRVQLKVGGGHGGHNGVKSVNAHV-GSPEYARVRVGVGRPPPRMDPADYVLGKFAKGEDAELDLCVEQAVEATRLAVELGAARAMNQVN 185
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_THEPX (Peptidyl-tRNA hydrolase OS=Thermoanaerobacter sp. (strain X514) GN=pth PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.003e-40 Identity = 83/185 (44.86%), Postives = 124/185 (67.03%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 ++I GLGNPG++Y GTRHNVGF ++D +A+ G++V+ + FK+ G+G ++L KPQTFMN+SG+++ V++YKIPL+ V+VI+DD DL K+R+ KG GGHNGM SII + S EFPR+RIGIG+P + D V+ VL F + E++ +D + +AV ++ G A + N Sbjct: 2 YVIAGLGNPGREYEGTRHNVGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLKPQTFMNSSGEALYDAVNFYKIPLENVIVIYDDKDLDLGKIRIRKKGSSGGHNGMNSII-YLLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHAMSKFN 183
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_EXISA (Peptidyl-tRNA hydrolase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=pth PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.536e-39 Identity = 83/166 (50.00%), Postives = 110/166 (66.27%), Query Frame = 1 Query: 151 IVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEA 648 IVGLGNPGK++ TRHNVGF +D +AE GIS++ F A G G I V+L KP T+MN SG++V I+ YYKI + +LVI+DDLD+ K+R PKG GGHNG++S+I H G+ EF RL++GIGRPP + V++VL + K E EL+ T V A Sbjct: 4 IVGLGNPGKKFEMTRHNVGFLAIDRLAEKHGISLNEAKFNALMGTGRINGERVVLVKPLTYMNLSGEAVRPILDYYKIEIDDLLVIYDDLDMVPGKLRFRPKGSAGGHNGIKSLIQHL-GTAEFKRLKLGIGRPPHPIKVVDWVLMNYRKDELPELNETLDNAVTA 168
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_GEOBB (Peptidyl-tRNA hydrolase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=pth PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.006e-39 Identity = 86/184 (46.74%), Postives = 115/184 (62.50%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 LIVGLGNPG +Y+ TRHN GF ++D +A GI V+ F G G + V L KPQTFMN SG+SV + +YK+ L ++VI DDLD+PF K++L GGHGGHNG+RS+ GS + R+R+GIGRP D VNFVL F+K+E L V+A+ +++ EG KA + N Sbjct: 5 LIVGLGNPGPKYSWTRHNAGFMVLDRLASLSGIQVTRKAFSGLSGDGNWSSERVYLLKPQTFMNLSGRSVAEALRFYKLSLSDLIVIHDDLDIPFGKVKLKEGGGHGGHNGLRSLAQEL-GSSAYARIRVGIGRPV-HGDVVNFVLTNFAKEEMDSLLEVLDTSVDALEMMIKEGMPKAMSIFN 186
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_FRAAA (Peptidyl-tRNA hydrolase OS=Frankia alni (strain ACN14a) GN=pth PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.006e-39 Identity = 78/177 (44.07%), Postives = 115/177 (64.97%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEG 672 PWL+VGLGNPG Y G RHN GF +VD +AE G + S +A + + +LA+P +FMN SG V ++ ++YKI +V+V+ D+LD+PF +RL GG GHNG+RSI G+R++ R+R+GIGRPPG+MD ++VLR F+ ER+EL + ++V +L+ +G Sbjct: 10 PWLVVGLGNPGPGYAGNRHNAGFMVVDLLAERAGSRLKSHRSRADVAEVRLAGTRAILARPLSFMNLSGGPVSAVRTFYKIDPARVIVVHDELDIPFGSVRLKRGGGDNGHNGLRSISSAL-GTRDYLRVRVGIGRPPGRMDPADYVLRDFAAAERRELPLLLEHSADSVEMLITDG 185
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_CLOD6 (Peptidyl-tRNA hydrolase OS=Clostridium difficile (strain 630) GN=pth PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.006e-39 Identity = 75/185 (40.54%), Postives = 119/185 (64.32%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 +++VGLGNPGK+Y TRHNVGF+++D +A+ ISV+ + KA G+G +G V+L KPQT+MN SG+++ I YYK+ L ++V++DD+DL K+R+ KG G HNGM+SI GS +FPR+R+G+ +P D +FVL F K+E ++ ++ +A+ ++ E + + N Sbjct: 2 YVVVGLGNPGKKYEKTRHNVGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVKPQTYMNLSGETLIDIYKYYKVDLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITKCL-GSNDFPRVRVGVSKPEAGQDLADFVLSRFRKEESDNINEALEKAADAIDSIIRENIDMSMNKYN 185
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_THEP3 (Peptidyl-tRNA hydrolase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=pth PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.421e-39 Identity = 82/185 (44.32%), Postives = 124/185 (67.03%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 ++I GLGNPG++Y GTRHNVGF ++D +A+ G++V+ + FK+ G+G ++L KPQTF+N+SG+++ V++YKIPL+ V+VI+DD DL K+R+ KG GGHNGM SII + S EFPR+RIGIG+P + D V+ VL F + E++ +D + +AV ++ G A + N Sbjct: 2 YVIAGLGNPGREYEGTRHNVGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLKPQTFVNSSGEALYDAVNFYKIPLENVIVIYDDKDLDVGKIRIRKKGSSGGHNGMNSII-YLLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHAMSKFN 183
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_GEOSM (Peptidyl-tRNA hydrolase OS=Geobacter sp. (strain M21) GN=pth PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.468e-39 Identity = 86/184 (46.74%), Postives = 114/184 (61.96%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 LIVGLGNPG +Y+ TRHN GF ++D +A GI V+ F G G V L KPQTFMN SG+SV + +YK+ L ++VI DDLD+PF K++L GGHGGHNG+RS+ GS + R+R+GIGRP D VNFVL F+K+E L V+A+ +++ EG KA + N Sbjct: 5 LIVGLGNPGPKYSWTRHNAGFMVLDRLASISGIQVTRKAFSGLSGDGNWAAERVYLLKPQTFMNLSGRSVAEALRFYKLSLSDLIVIHDDLDIPFGKVKLKEGGGHGGHNGLRSLAQEL-GSSAYARIRVGIGRPV-HGDVVNFVLANFAKEEMDSLLEVLDTSVDALEMMIKEGMPKAMSIFN 186
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_BDEBA (Peptidyl-tRNA hydrolase OS=Bdellovibrio bacteriovorus GN=pth PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 7.621e-39 Identity = 82/187 (43.85%), Postives = 121/187 (64.71%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSV-NFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNT 702 WLIVGLGNPG +Y TRHN+GF VD + E G FKA + I + PV+ KPQT+MN SG+SV ++ +YKIPL++++VI D++D PF++M++ GHGGHNG++S I GS ++ RLR+G+GRP V ++VL F+K+E ++ + +AV ++L+G KA+T NT Sbjct: 2 WLIVGLGNPGGEYKLTRHNIGFMAVDFLMEGLGNPPIKNQFKAEIAQAKIKDHPVIFCKPQTYMNLSGESVQPLMGFYKIPLERLIVIHDEIDQPFAQMKIQKNRGHGGHNGIKS-ISGLMGSMDYTRLRLGVGRPANPNIPVPDYVLGKFTKEEFAQMPDFLNKAGDAVESIILDGIQKASTKFNT 187 The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bpback to top |