FC873342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_VIBC3 (Peptidyl-tRNA hydrolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=pth PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.634e-28 Identity = 65/188 (34.57%), Postives = 107/188 (56.91%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSV-NFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 L+VGL NPG +Y TRHN G +V+ +A +++ + F G+ I + + + P TFMN SG+++ ++ ++Y+I ++++V D+LDLP + GGHGGHNG++ I ++EF RLR+GIG P K +VL +E++ LD + V + IL+ +G KA ++T K Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLINSQELRVLIPTTFMNLSGKAIAALANFYQIKPEEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTISKLGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEILMKDGLTKAQNRLHTFK 194
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_PSEPG (Peptidyl-tRNA hydrolase OS=Pseudomonas putida (strain GB-1) GN=pth PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.634e-28 Identity = 76/191 (39.79%), Postives = 109/191 (57.07%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGK----GFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGLGNPG +Y TRHN G V+ IA A+ +S+++ K +FG GN V L P T+MN SGQSV ++ ++++I + +LV D+LDLP +L GGHGGHNG+R II +F RLR+GIG P NFVL + E+++LD + + + +L F KA +++ K Sbjct: 6 LIVGLGNPGPEYEQTRHNAGALFVERIASAQRVSLTAD--KKYFGLTAKFSHQGN-DVRLLIPTTYMNRSGQSVAALANFFRIKPEAILVAHDELDLPPGVAKLKRGGGHGGHNGLRDIIAQLGNQNDFHRLRLGIGHPGDAKLVSNFVLGRAPRAEQEKLDASIDFALGVLPDVLAGDFAKAMRELHSQK 193
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_NEIMA (Peptidyl-tRNA hydrolase OS=Neisseria meningitidis serogroup A GN=pth PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.634e-28 Identity = 69/188 (36.70%), Postives = 111/188 (59.04%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVP---VMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNT 702 ++VGLGNPGK+Y TRHN GF +D +A S K FG+ +P V L KP TFMN SGQ+V ++ +YKI +++LV+ D+LD+P +++ GG+GGHNG++ I G+ ++ RLR+GIG P + V +VL S + R+++D + ++A+ +L +A F+++ Sbjct: 7 MVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEE--KKFFGEVARATLPDGDVWLLKPTTFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQAKL-GTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRRQIDDAVAKSLQAIPDILAGKCEEATRFLHS 191
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SALCH (Peptidyl-tRNA hydrolase OS=Salmonella choleraesuis GN=pth PE=3 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28 Identity = 72/188 (38.30%), Postives = 100/188 (53.19%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISV-SSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGL NPG +Y TRHN G VD +AE + F + + + V L P TFMN SG++VG++VS+Y+I ++LV D+LDLP + GGHGGHNG++ II + F RLR+GIG P K V FVL E++ +D + + EG KA + ++T K Sbjct: 5 LIVGLANPGTEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMVSFYRIQPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLAKATSRLHTFK 192
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_PROM5 (Peptidyl-tRNA hydrolase OS=Prochlorococcus marinus (strain MIT 9515) GN=pth PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28 Identity = 67/176 (38.07%), Postives = 107/176 (60.80%), Query Frame = 1 Query: 151 IVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVN-FKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPP-----GKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRIL 660 I+GLGNPGKQY +RHN+GF +++ ++ + N K+ + + I + L P T+MN SG +V +IV +YKI L +V +I DD+DLP K+R KG GGHNG++ II+ + + F R++IGIG PP ++++++ VL S QE L+ +Q+ +E++ L Sbjct: 8 IIGLGNPGKQYIKSRHNIGFLLLETFSKKYDAQFTLKNKLKSRYTEFKINDSIYKLFMPHTYMNNSGDAVKAIVDWYKISLDKVFIIVDDIDLPLGKIRFRKKGSSGGHNGLKDIINKLQ-TENFNRIKIGIGSPPINETKKQLNTISHVLGNISSQENSTLEKVYQKVIESLEEL 182
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_NEIG2 (Peptidyl-tRNA hydrolase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=pth PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28 Identity = 66/186 (35.48%), Postives = 110/186 (59.14%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVN-FKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNT 702 ++VGLGNPGK+Y TRHN GF +D +A S F + + + V L KP TFMN SGQ+V ++ +YKI +++LV+ D+LD+P +++ GG+GGHNG++ I G+ ++ RLR+GIG P + V +VL S + R+++D + ++AV ++ + +A F+++ Sbjct: 7 MVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARAALPDGDVWLLKPATFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQAKL-GTADYYRLRLGIGHPGDRNLVVGYVLNKPSAEHRRQIDDAVAKSLQAVPDIISGKWEEATRFLHS 191
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_NEIG1 (Peptidyl-tRNA hydrolase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=pth PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28 Identity = 66/186 (35.48%), Postives = 110/186 (59.14%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVN-FKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNT 702 ++VGLGNPGK+Y TRHN GF +D +A S F + + + V L KP TFMN SGQ+V ++ +YKI +++LV+ D+LD+P +++ GG+GGHNG++ I G+ ++ RLR+GIG P + V +VL S + R+++D + ++AV ++ + +A F+++ Sbjct: 7 MVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARAALPDGDVWLLKPATFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQAKL-GTADYYRLRLGIGHPGDRNLVVGYVLNKPSAEHRRQIDDAVAKSLQAVPDIISGKWEEATRFLHS 191
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_MYCA5 (Peptidyl-tRNA hydrolase OS=Mycoplasma arthritidis (strain 158L3-1) GN=pth PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28 Identity = 68/158 (43.04%), Postives = 97/158 (61.39%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELD 621 LIVGLGNPG +Y TRHN+GF VD I E IS++ F F + N +LAKP T+MN SG V +++ YY I ++ ++V++DD+DL K + KG GGHNG++ II+ K + RL++GIGR +++NFVL FS + Q +D Sbjct: 3 LIVGLGNPGTEYEKTRHNIGFMAVDKICEKLNISLNEKKFNGIFYR----NKDFILAKPLTYMNKSGDFVQALMQYYDISVEDLIVVYDDMDLLIGKAVIRQKGSSGGHNGIKDIIEKLK-TENIKRLKVGIGRGD---NAINFVLGKFSIADYQIID 152
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_METRJ (Peptidyl-tRNA hydrolase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=pth PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28 Identity = 68/153 (44.44%), Postives = 91/153 (59.48%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQE 606 LIVGLGNPG +Y G RHN+GF VDAIA S F+ + +G +L KP TFMN SG++V +YKIPL V+V+ D+LDL +K+R+ GG+ GHNG+RSI + ++ R+R+GIG P K +VL F K E Sbjct: 3 LIVGLGNPGARYAGNRHNIGFLAVDAIARQHRASPFRHRFQGEAAEVVLGTERAILLKPSTFMNESGRAVSEAQRFYKIPLADVIVLHDELDLAPAKLRVKRGGGNAGHNGLRSIT--AQCGNDYRRVRLGIGHPGDKALVHAYVLNDFGKAE 153
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_FRATW (Peptidyl-tRNA hydrolase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=pth PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28 Identity = 69/166 (41.57%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGV 642 +IVGLGN GK+Y TRHNVG + IA+ S SS + K I V+L P T+MN SG +V + ++YKI ++LV+ D+LD+ ++RL GGHGGHNG+RSI H G+ ++ RLRIGIG P K N+VL S +++++D G+ Sbjct: 6 MIVGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNPKLNCNLAKVSIDYNNVVLVFPTTYMNNSGLAVSKVANFYKIAPAEILVVHDELDIDSGEIRLKKGGGHGGHNGLRSINQHL-GTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDNGI 170 The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bpback to top |