FC873342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_FRATN (Peptidyl-tRNA hydrolase OS=Francisella tularensis subsp. novicida (strain U112) GN=pth PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28 Identity = 69/166 (41.57%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGV 642 +IVGLGN GK+Y TRHNVG + IA+ S SS + K I V+L P T+MN SG +V + ++YKI ++LV+ D+LD+ ++RL GGHGGHNG+RSI H G+ ++ RLRIGIG P K N+VL S +++++D G+ Sbjct: 6 MIVGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNPKLNCNLAKVSIDYNNVVLVFPTTYMNNSGLAVSKVANFYKIAPAEILVVHDELDIDSGEIRLKKGGGHGGHNGLRSINQHL-GTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDNGI 170
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_FRATM (Peptidyl-tRNA hydrolase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=pth PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28 Identity = 69/166 (41.57%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGV 642 +IVGLGN GK+Y TRHNVG + IA+ S SS + K I V+L P T+MN SG +V + ++YKI ++LV+ D+LD+ ++RL GGHGGHNG+RSI H G+ ++ RLRIGIG P K N+VL S +++++D G+ Sbjct: 6 MIVGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNPKLNCNLAKVSIDYNNVVLVFPTTYMNNSGLAVSKVANFYKIAPAEILVVHDELDIDSGEIRLKKGGGHGGHNGLRSINQHL-GTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDNGI 170
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_DEIDV (Peptidyl-tRNA hydrolase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=pth PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28 Identity = 75/187 (40.11%), Postives = 105/187 (56.15%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFK--AHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNT 702 L+VGLGNPG QY TRHNVG+ +V+ +A G + A G V V+L KPQTFMNASG++V +S++K+ +LV+ DDLD PF M++ G HGG NG+R II G+ F RL++GI RPP D ++VL + +E+ L + G +AV G +A N+ Sbjct: 3 LVVGLGNPGTQYAQTRHNVGWLVVNEVARRWGATWRKEKDAEVAEIRLGPAPGVKVLLVKPQTFMNASGKAVVPRLSFFKLDPGALLVVQDDLDSPFGLMKVRLGGRHGGQNGVRDII-RLLGTEAFARLKLGISRPPAGRDPADWVLSRWRDEEQSTLGDLVRLGADAVERWATAGLAEAQQAFNS 188
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_BURP6 (Peptidyl-tRNA hydrolase OS=Burkholderia pseudomallei (strain 668) GN=pth PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28 Identity = 71/176 (40.34%), Postives = 100/176 (56.82%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVN-FKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRP----------PGKMDSVNFVLRPFSKQERQELDFTFQQGV 642 LIVGLGNPG +Y TRHN GF +VD +A G ++ F + K + V L +PQT+MN SGQ+V ++ ++KI ++LV D+LDLP +L GG GGHNG++ I H S+++ RLRIGIG P K D NFVL+P K E+ +D ++ + Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLFGEEVHLLEPQTYMNRSGQAVVALAHFFKILPTEILVAHDELDLPPGAAKLKLGGGSGGHNGLKDISAHL-SSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRKDEQDLIDAAIERAL 178
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_BURP1 (Peptidyl-tRNA hydrolase OS=Burkholderia pseudomallei (strain 1710b) GN=pth PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28 Identity = 71/176 (40.34%), Postives = 100/176 (56.82%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVN-FKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRP----------PGKMDSVNFVLRPFSKQERQELDFTFQQGV 642 LIVGLGNPG +Y TRHN GF +VD +A G ++ F + K + V L +PQT+MN SGQ+V ++ ++KI ++LV D+LDLP +L GG GGHNG++ I H S+++ RLRIGIG P K D NFVL+P K E+ +D ++ + Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLFGEEVHLLEPQTYMNRSGQAVVALAHFFKILPTEILVAHDELDLPPGAAKLKLGGGSGGHNGLKDISAHL-SSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRKDEQDLIDAAIERAL 178
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_BURP0 (Peptidyl-tRNA hydrolase OS=Burkholderia pseudomallei (strain 1106a) GN=pth PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28 Identity = 71/176 (40.34%), Postives = 100/176 (56.82%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVN-FKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRP----------PGKMDSVNFVLRPFSKQERQELDFTFQQGV 642 LIVGLGNPG +Y TRHN GF +VD +A G ++ F + K + V L +PQT+MN SGQ+V ++ ++KI ++LV D+LDLP +L GG GGHNG++ I H S+++ RLRIGIG P K D NFVL+P K E+ +D ++ + Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLFGEEVHLLEPQTYMNRSGQAVVALAHFFKILPTEILVAHDELDLPPGAAKLKLGGGSGGHNGLKDISAHL-SSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRKDEQDLIDAAIERAL 178
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_BURM9 (Peptidyl-tRNA hydrolase OS=Burkholderia mallei (strain NCTC 10229) GN=pth PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28 Identity = 71/176 (40.34%), Postives = 100/176 (56.82%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVN-FKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRP----------PGKMDSVNFVLRPFSKQERQELDFTFQQGV 642 LIVGLGNPG +Y TRHN GF +VD +A G ++ F + K + V L +PQT+MN SGQ+V ++ ++KI ++LV D+LDLP +L GG GGHNG++ I H S+++ RLRIGIG P K D NFVL+P K E+ +D ++ + Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLFGEEVHLLEPQTYMNRSGQAVVALAHFFKILPTEILVAHDELDLPPGAAKLKLGGGSGGHNGLKDISAHL-SSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRKDEQDLIDAAIERAL 178
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_BURM7 (Peptidyl-tRNA hydrolase OS=Burkholderia mallei (strain NCTC 10247) GN=pth PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28 Identity = 71/176 (40.34%), Postives = 100/176 (56.82%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVN-FKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRP----------PGKMDSVNFVLRPFSKQERQELDFTFQQGV 642 LIVGLGNPG +Y TRHN GF +VD +A G ++ F + K + V L +PQT+MN SGQ+V ++ ++KI ++LV D+LDLP +L GG GGHNG++ I H S+++ RLRIGIG P K D NFVL+P K E+ +D ++ + Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLFGEEVHLLEPQTYMNRSGQAVVALAHFFKILPTEILVAHDELDLPPGAAKLKLGGGSGGHNGLKDISAHL-SSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRKDEQDLIDAAIERAL 178
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SHIDS (Peptidyl-tRNA hydrolase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=pth PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.905e-28 Identity = 70/188 (37.23%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISV-SSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGL NPG +Y TRHN G VD +AE + F + + +G V L P TFMN SG++V ++ S+++I ++LV+ D+LDLP + GGHGGHNG++ II + F RLRIGIG P K V FVL E++ +D + V + +G KA ++ K Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVVHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAVRCTEMWFTDGLTKATNRLHAFK 192
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_RHOPT (Peptidyl-tRNA hydrolase OS=Rhodopseudomonas palustris (strain TIE-1) GN=pth PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.905e-28 Identity = 64/154 (41.56%), Postives = 90/154 (58.44%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQER 609 L VGLGNPG +Y G RHN+GF ++D IA G S F+ G + + L KP T+MN SG++V S+YKI ++ V D+++LP +K+R+ GG GHNG+RSI H ++ R+R+G+G P K N VL F+K ER Sbjct: 3 LFVGLGNPGAKYQGNRHNIGFMVIDEIARRHGFSPWRRRFQGETADGVLDGERITLLKPLTYMNESGRAVQDAASFYKIGQNEIAVFHDEIELPPAKVRVKVGGGIAGHNGLRSISAHI--GNDYLRVRLGVGHPGAKELVHNHVLGDFAKSER 154 The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bpback to top |