FC873342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_RHOPA (Peptidyl-tRNA hydrolase OS=Rhodopseudomonas palustris GN=pth PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.905e-28 Identity = 64/154 (41.56%), Postives = 90/154 (58.44%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQER 609 L VGLGNPG +Y G RHN+GF ++D IA G S F+ G + + L KP T+MN SG++V S+YKI ++ V D+++LP +K+R+ GG GHNG+RSI H ++ R+R+G+G P K N VL F+K ER Sbjct: 3 LFVGLGNPGAKYQGNRHNIGFMVIDEIARRHGFSPWRRRFQGETADGVLDGERITLLKPLTYMNESGRAVQDAASFYKIGQNEIAVFHDEIELPPAKVRVKVGGGIAGHNGLRSISAHI--GNDYLRVRLGVGHPGAKELVHNHVLGDFAKSER 154
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_PSESM (Peptidyl-tRNA hydrolase OS=Pseudomonas syringae pv. tomato GN=pth PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.905e-28 Identity = 71/188 (37.77%), Postives = 103/188 (54.79%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGIS-VSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGLGNPG +Y TRHN G V+ IA A+ ++ V F G+ V L P T+MN SGQ+V ++ +Y+IP++ +LV D+LDLP +L GGHGGHNG+R II F RLR+GIG P FVL + E+++LD + + + + +N+A +++ K Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVPERKFFGLTGRFTHQGQDVRLLIPTTYMNRSGQAVAALAGFYRIPIESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNRAMKNLHSQK 193
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_PSEPK (Peptidyl-tRNA hydrolase OS=Pseudomonas putida (strain KT2440) GN=pth PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.905e-28 Identity = 75/191 (39.27%), Postives = 109/191 (57.07%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGK----GFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGLGNPG +Y TRHN G V+ +A A+ +S+++ K +FG GN V L P T+MN SGQSV ++ ++++I + +LV D+LDLP +L GGHGGHNG+R II +F RLR+GIG P NFVL + E+++LD + + + +L F KA +++ K Sbjct: 6 LIVGLGNPGPEYEQTRHNAGALFVERLASAQRVSLTAD--KKYFGLTAKFSHQGN-DVRLLIPTTYMNRSGQSVAALANFFRIKPEAILVAHDELDLPPGVAKLKRGGGHGGHNGLRDIIAQLGNQNDFHRLRLGIGHPGDAKLVSNFVLGRAPRAEQEKLDASIDFALGVLPDVLAGDFAKAMRELHSQK 193
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_PSEP1 (Peptidyl-tRNA hydrolase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=pth PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.905e-28 Identity = 75/191 (39.27%), Postives = 109/191 (57.07%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGK----GFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGLGNPG +Y TRHN G V+ +A A+ +S+++ K +FG GN V L P T+MN SGQSV ++ ++++I + +LV D+LDLP +L GGHGGHNG+R II +F RLR+GIG P NFVL + E+++LD + + + +L F KA +++ K Sbjct: 6 LIVGLGNPGPEYEQTRHNAGALFVERLASAQRVSLTAD--KKYFGLTAKFSHQGN-DVRLLIPTTYMNRSGQSVAALANFFRIKPEAILVAHDELDLPPGVAKLKRGGGHGGHNGLRDIIAQLGNQNDFHRLRLGIGHPGDAKLVSNFVLGRAPRAEQEKLDASIDFALGVLPDVLAGDFAKAMRELHSQK 193
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_PROMS (Peptidyl-tRNA hydrolase OS=Prochlorococcus marinus (strain AS9601) GN=pth PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.905e-28 Identity = 69/173 (39.88%), Postives = 107/173 (61.85%), Query Frame = 1 Query: 151 IVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGIS-VSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPP---GK--MDSVNFVLRPFSKQERQELDFTFQQGVEAV 651 ++GLGNPGK+Y +RHN+GF ++++ ++ + + K+ + I N L P TFMN SG +V +IV +YKI L Q+L+I DD DLP K+R KG GGHNG++SII+ + ++ F R+RIGIG PP GK ++++ VL S E+ LD + + +E++ Sbjct: 6 LIGLGNPGKKYFNSRHNIGFLLLESFSKKYNSNFLLKDKLKSSCSEFQINNSTFKLFLPNTFMNNSGDAVRAIVDWYKINLDQILIIVDDKDLPLGKIRFRRKGSSGGHNGLKSIIEQLQ-TQNFKRIRIGIGSPPITNGKNHFNTISHVLGNISLDEKSILDKVYSRVIESL 177
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_METPB (Peptidyl-tRNA hydrolase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=pth PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.905e-28 Identity = 67/153 (43.79%), Postives = 93/153 (60.78%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQE 606 LIVGLGNPG++Y RHN+GF VD IA + F+ + +G+ +L KPQTFMN SG+SVG ++KIPL V+V+ D+LDL +K+R+ GG+ GHNG+RSI ++ R+R+GIG P K +VL F+K E Sbjct: 3 LIVGLGNPGQRYARNRHNIGFMAVDEIARVHRAAPFRRRFQGEAAEVMLGSERAILLKPQTFMNESGRSVGEAQRFFKIPLSDVIVLHDELDLAPAKLRVKLGGGNAGHNGLRSIT--ALCGNDYRRVRLGIGHPGDKALVHAYVLNDFAKSE 153
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_METEP (Peptidyl-tRNA hydrolase OS=Methylobacterium extorquens (strain PA1) GN=pth PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.905e-28 Identity = 68/153 (44.44%), Postives = 92/153 (60.13%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQE 606 LIVGLGNPG +Y RHN+GF VD IA + F+ + +G+ +L KPQTFMN SG+SVG ++KIPL V+V+ D+LDL +K+R+ GG+ GHNG+RSI E+ R+R+GIG P K +VL F+K E Sbjct: 3 LIVGLGNPGARYARNRHNIGFMAVDEIARVHRAAPFRRRFQGEAAEVMLGSERAILLKPQTFMNESGRSVGEAQRFFKIPLADVIVLHDELDLAPAKLRVKLGGGNAGHNGLRSIT--ALCGNEYRRVRLGIGHPGDKALVHAYVLNDFAKSE 153
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_METC4 (Peptidyl-tRNA hydrolase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=pth PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.905e-28 Identity = 68/153 (44.44%), Postives = 92/153 (60.13%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQE 606 LIVGLGNPG +Y RHN+GF VD IA + F+ + +G+ +L KPQTFMN SG+SVG ++KIPL V+V+ D+LDL +K+R+ GG+ GHNG+RSI E+ R+R+GIG P K +VL F+K E Sbjct: 3 LIVGLGNPGARYARNRHNIGFMAVDEIARVHRAAPFRRRFQGEAAEVMLGSERAILLKPQTFMNESGRSVGEAQRFFKIPLADVIVLHDELDLAPAKLRVKLGGGNAGHNGLRSIT--ALCGNEYRRVRLGIGHPGDKALVHAYVLNDFAKSE 153
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_LEGPA (Peptidyl-tRNA hydrolase OS=Legionella pneumophila (strain Paris) GN=pth PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.905e-28 Identity = 75/185 (40.54%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVS-SVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 LIVGL NPG Y TRHN G +V A+A+ +A + I N P LA P TFMN SGQ+ I +YKI ++L++ D+LDLP +++L GGHGGHNG+R I G+ EF RLRIGIG P K +VL S +RQ++ +G+ + I+L +A VN Sbjct: 5 LIVGLRNPGSAYEQTRHNAGAWLVTALAQRHNSHFKIDKKMQAELTEIDINNHPCRLALPLTFMNHSGQTTRIISQFYKIEPGEILIVHDELDLPVGRIKLKTGGGHGGHNGLRDITAQL-GTGEFHRLRIGIGHPGHKDLVHQYVLSRPSMHDRQQIYDAIDRGIAIIPIVLSGDMARAMNQVN 188
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_FRATT (Peptidyl-tRNA hydrolase OS=Francisella tularensis subsp. tularensis GN=pth PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.905e-28 Identity = 68/166 (40.96%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGV 642 +I+GLGN GK+Y TRHNVG + IA+ S SS + K I V+L P T+MN SG +V + ++YKI ++LV+ D+LD+ ++RL GGHGGHNG+RSI H G+ ++ RLRIGIG P K N+VL S +++++D G+ Sbjct: 6 MIIGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNPKLNCNLAKVSIDYNNVVLVFPTTYMNNSGLAVSKVANFYKIAPAEILVVHDELDIDSGEIRLKKGGGHGGHNGLRSINQHL-GTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDNGI 170 The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bpback to top |