FC873342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_FRAT1 (Peptidyl-tRNA hydrolase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=pth PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.905e-28 Identity = 68/166 (40.96%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGV 642 +I+GLGN GK+Y TRHNVG + IA+ S SS + K I V+L P T+MN SG +V + ++YKI ++LV+ D+LD+ ++RL GGHGGHNG+RSI H G+ ++ RLRIGIG P K N+VL S +++++D G+ Sbjct: 6 MIIGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNPKLNCNLAKVSIDYNNVVLVFPTTYMNNSGLAVSKVANFYKIAPAEILVVHDELDIDSGEIRLKKGGGHGGHNGLRSINQHL-GTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDNGI 170
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_DESAD (Peptidyl-tRNA hydrolase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=pth PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.905e-28 Identity = 77/196 (39.29%), Postives = 104/196 (53.06%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAH--------FGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAKP 711 LIVGLGNPG +Y TRHN+GF VDA+AE S S+ FK F GN V+ KP T+MN SG++V +I Y I + V VI D+LDLP +M+ GG+ GH G+ SI + GS F R+R+GIGRP ++VL F+ QE Q ++ + + G A F+N+ P Sbjct: 6 LIVGLGNPGSEYAKTRHNIGFMAVDALAEVAK-SRKSMRFKEMGISGDFELFSLNLAGN-NVLATKPLTYMNLSGKAVAAICGKYSIAVSDVYVIHDELDLPCGRMKFKKGGGNNGHRGLESIQEKM-GSPNFFRIRVGIGRPEFSSQVKDYVLEEFNTQELAIAAQMSQAAIKGLNLHFRRGQGTATQFMNSFMP 198
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_CORDI (Peptidyl-tRNA hydrolase OS=Corynebacterium diphtheriae GN=pth PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.905e-28 Identity = 66/174 (37.93%), Postives = 104/174 (59.77%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGI--SVSSVNFKAH--FGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAV 651 P+LIVGLGN G +Y TRHN+G+ +D + + +V+ K + + +G V++AKP+ FMN +G SV + ++ + +++V++DDLDL F ++ GG GHNG++SI G++++ R IGIGRPPG+M +FVL+PFSK E+ EL + V Sbjct: 4 PYLIVGLGNLGPEYTKTRHNIGYMAIDELLTRTSPMPATLTVHKKTNTLVAETRLGTQKVIVAKPRAFMNVTGPSVRKLADFFTVDRNRIVVLYDDLDLEFGAIKFRHGGGDHGHNGLKSITQAL-GTKDYIRGGIGIGRPPGRMAPKSFVLKPFSKIEQSELPIVCADAADEV 176
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_ACIC5 (Peptidyl-tRNA hydrolase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=pth PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.905e-28 Identity = 74/190 (38.95%), Postives = 108/190 (56.84%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKI-PLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMD----SVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 +L+VGLGNPG +Y T HN GF VDAIA VS+ +A GK +G V+LAKP+T+MN SG +V ++V P++ +LV++D+LDLP +R+ +G HNG RSI G+ ++PR+RIG+G P G+ D N++L P K + LD ++ AV ++ G A N Sbjct: 2 FLVVGLGNPGIEYQFTPHNAGFLAVDAIAAEHNAVVSNRRCQALTGKIQLGGREVILAKPETYMNLSGVAVSALVRELNADPVRDLLVLYDELDLPIGSIRVRERGSPASHNGARSICSAL-GTADWPRVRIGVG-PSGEDDLFRKGKNYLLTPMRKADLATLDGALERTARAVETVVTRGIGVAMNEFN 189
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_PSEPW (Peptidyl-tRNA hydrolase OS=Pseudomonas putida (strain W619) GN=pth PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.032e-27 Identity = 75/191 (39.27%), Postives = 109/191 (57.07%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGK----GFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGLGNPG +Y TRHN G V+ IA A+ +S+++ + +FG GN V L P T+MN SGQSV ++ ++++I + +LV D+LDLP +L GGHGGHNG+R II +F RLR+GIG P NFVL + E+++LD + + + +L F KA +++ K Sbjct: 6 LIVGLGNPGPEYEQTRHNAGALFVERIASAQRVSLTAD--RKYFGLTAKFSHQGN-DVRLLIPTTYMNRSGQSVAALANFFRIKPEAILVAHDELDLPPGVAKLKRGGGHGGHNGLRDIIAQLGNQNDFHRLRLGIGHPGDAKLVSNFVLGRAPRAEQEKLDASIDFALGVLPDVLAGDFAKAMRELHSQK 193
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_PSE14 (Peptidyl-tRNA hydrolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=pth PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.032e-27 Identity = 71/188 (37.77%), Postives = 103/188 (54.79%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGIS-VSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGLGNPG +Y TRHN G V+ IA A+ ++ V F G+ V L P T+MN SGQ+V ++ +Y+IP++ +LV D+LDLP +L GGHGGHNG+R II F RLR+GIG P FVL + E+++LD + + + + +N+A +++ K Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVPERKFFGLTGRFTHQGQDVRLLIPTTYMNRSGQAVAALAGFYRIPVESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNRAMKNLHSQK 193
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_MARAV (Peptidyl-tRNA hydrolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=pth PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.032e-27 Identity = 70/185 (37.84%), Postives = 100/185 (54.05%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVS-SVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 ++VGLGNPG Y TRHN G V+A+A G ++ + + + + + L P TFMN SG ++ ++ ++KI +Q+LV D+LDLP +L GGHGGHNG+R I H G+ +F RLR+GIG P FVL KQE ++L F E +R+L K A +N Sbjct: 7 MVVGLGNPGSDYENTRHNAGALFVEALAREAGQTLRPEKKYHGLYARIQWQGLDLHLLNPSTFMNRSGTAIKALADFFKISPEQILVAHDELDLPPGTAKLKKGGGHGGHNGLRDTIAHL-GTNDFQRLRLGIGHPGDSRKVTGFVLGRLGKQETEQLTAVFD---EVMRVLPDAASGKLAAAMN 187
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_LACF3 (Peptidyl-tRNA hydrolase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=pth PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.032e-27 Identity = 71/170 (41.76%), Postives = 103/170 (60.59%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISV-SSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDS-VNFVLRPFSKQERQELDFTFQQGVEAV 651 +IVGLGN G +Y+ TRHN GF +V+ +A + + +A G I VML KP TFMN SG++V ++ YY I L ++V+ DDLD+P K++L +G GGHNG++S+IDH G+REF R+++GI P K S V+ VL F +ER + Q +A+ Sbjct: 3 MIVGLGNIGTRYDETRHNAGFMVVEQLARDFHLGAFTHEKVEAVTVTGLINGQKVMLVKPTTFMNESGRAVKPLMEYYDIALDDLIVVSDDLDMPVGKIKLKQRGASGGHNGLKSLIDHL-GTREFNRVKLGIDHP--KFGSVVSHVLGRFDTEERPVFEGAVLQAEQAL 169
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_FRATO (Peptidyl-tRNA hydrolase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=pth PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.032e-27 Identity = 69/166 (41.57%), Postives = 97/166 (58.43%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGV 642 +IVGLGN GK+Y TRHNVG + IA+ S SS + K I V+L P T+MN SG +V + ++YKI ++LV D+LD+ ++RL GGHGGHNG+RSI H G+ ++ RLRIGIG P K N+VL S +++++D G+ Sbjct: 6 MIVGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNTKLNCNLAKVSIDYNNVVLVFPTTYMNNSGLAVSKVANFYKIAPAEILVAHDELDIDSGEIRLKKGGGHGGHNGLRSINQHL-GTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDNGI 170
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_FRATH (Peptidyl-tRNA hydrolase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=pth PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.032e-27 Identity = 69/166 (41.57%), Postives = 97/166 (58.43%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGV 642 +IVGLGN GK+Y TRHNVG + IA+ S SS + K I V+L P T+MN SG +V + ++YKI ++LV D+LD+ ++RL GGHGGHNG+RSI H G+ ++ RLRIGIG P K N+VL S +++++D G+ Sbjct: 6 MIVGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNTKLNCNLAKVSIDYNNVVLVFPTTYMNNSGLAVSKVANFYKIAPAEILVAHDELDIDSGEIRLKKGGGHGGHNGLRSINQHL-GTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDNGI 170 The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bpback to top |