FC873342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_FRATF (Peptidyl-tRNA hydrolase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=pth PE=3 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 1.032e-27 Identity = 69/166 (41.57%), Postives = 97/166 (58.43%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGV 642 +IVGLGN GK+Y TRHNVG + IA+ S SS + K I V+L P T+MN SG +V + ++YKI ++LV D+LD+ ++RL GGHGGHNG+RSI H G+ ++ RLRIGIG P K N+VL S +++++D G+ Sbjct: 6 MIVGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNTKLNCNLAKVSIDYNNVVLVFPTTYMNNSGLAVSKVANFYKIAPAEILVAHDELDIDSGEIRLKKGGGHGGHNGLRSINQHL-GTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDNGI 170
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_ACTSZ (Peptidyl-tRNA hydrolase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=pth PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.032e-27 Identity = 67/188 (35.64%), Postives = 103/188 (54.79%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGLGNPG +Y TRHN G ++D ++ ++ F + I + P TFMN SG+++G++ S+Y+I +++L+ D+LDLP +++ GGHGGHNG++ I ++ F RLRIGIG P + ++VL S + +D + V V ILL +G KA +N K Sbjct: 6 LIVGLGNPGDKYADTRHNAGEWLIDRLSRRFNFTLKDEAKFFGKTARTVIDGHEIRFLVPATFMNLSGKAIGALASFYRIRPEEILLAHDELDLPPGTVKIKQGGGHGGHNGLKDTIAQLGNNKNFYRLRIGIGHPGDRNLVTSYVLGKPSPADWALIDKALDEAVVCVEILLKDGITKATNRLNGFK 193
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_PSEU2 (Peptidyl-tRNA hydrolase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=pth PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.348e-27 Identity = 71/188 (37.77%), Postives = 102/188 (54.26%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGIS-VSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGLGNPG +Y TRHN G V+ IA A+ + V F G+ V L P T+MN SGQ+V ++ +Y+IP++ +LV D+LDLP +L GGHGGHNG+R II F RLR+GIG P FVL + E+++LD + + + + +N+A +++ K Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVDLVPERKFFGLTGRFTHQGQDVRLLIPTTYMNRSGQAVAALAGFYRIPVESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNRAMKNLHSQK 193
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_PSEE4 (Peptidyl-tRNA hydrolase OS=Pseudomonas entomophila (strain L48) GN=pth PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.348e-27 Identity = 74/183 (40.44%), Postives = 105/183 (57.38%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGK----GFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKA 684 LIVGLGNPG +Y TRHN G V+ +A A+ +S+++ K +FG GN V L P T+MN SGQSV ++ ++++I + +LV D+LDLP +L GGHGGHNG+R II +F RLR+GIG P NFVL + E+++LD + + + +L F KA Sbjct: 6 LIVGLGNPGPEYEQTRHNAGALFVERLASAQRVSLTAD--KKYFGLTAKFSHQGN-DVRLLIPTTYMNRSGQSVAALANFFRIKPEAILVAHDELDLPPGVAKLKRGGGHGGHNGLRDIIAQLGNQNDFHRLRLGIGHPGDAKLVSNFVLGRAPRAEQEKLDASIDFALGVMPDVLAGDFAKA 185
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_PSEA7 (Peptidyl-tRNA hydrolase OS=Pseudomonas aeruginosa (strain PA7) GN=pth PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.348e-27 Identity = 72/168 (42.86%), Postives = 94/168 (55.95%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGIS-VSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVL--RPFSKQERQELDFTFQQGV 642 LIVGLGNPG +Y+ TRHN G V+ +A A+GIS V+ + GK V L P T+MN SGQSV ++ +++IP +LV D+LD+P +L GGHGGHNG+R II F RLR+GIG P +VL P S+QE + F GV Sbjct: 6 LIVGLGNPGPEYDQTRHNAGALFVERLAHAQGISLVAERKYFGLVGKFSHQGKDVRLLIPTTYMNRSGQSVAALAGFFRIPPDAILVAHDELDMPPGVAKLKTGGGHGGHNGLRDIIAQLGNQNSFHRLRLGIGHPGHSSLVSGYVLGRAPRSEQELLDTSIDFALGV 173
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_PROM2 (Peptidyl-tRNA hydrolase OS=Prochlorococcus marinus (strain MIT 9215) GN=pth PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.348e-27 Identity = 67/176 (38.07%), Postives = 108/176 (61.36%), Query Frame = 1 Query: 151 IVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGIS-VSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPP-----GKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRIL 660 ++GLGNPGK++ +RHN+GF +++ ++ + + K+ + + I N L P TFMN SG +V +IV +YKI L Q+ +I DD DLP K+R KG GGHNG++SII+ + +++F R+RIGIG PP ++++ VL S +E+ LD F++ +E++ L Sbjct: 6 LIGLGNPGKKFLNSRHNIGFLLLEYFSKKYNSNFLFKDKLKSSYSEFQIDNSSYRLFLPNTFMNNSGYAVRAIVDWYKINLDQIFIIVDDKDLPLGKIRFRRKGSSGGHNGLKSIIEQLQ-TQKFKRIRIGIGSPPPIKGEKNFNTISHVLGNISLEEKSILDKVFRRVIESLEKL 180
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_NOVAD (Peptidyl-tRNA hydrolase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=pth PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.348e-27 Identity = 69/157 (43.95%), Postives = 91/157 (57.96%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQEL 618 L VGLGNPG QY RHNVGF +D IAE F+ +G IG V+L KP TFMN SG+SVG + +YK+ + ++V D+LDL K+++ GG GHNG+RSI H +F R+R+GIG P K VL F+K E+ +L Sbjct: 3 LWVGLGNPGPQYALHRHNVGFMALDTIAEVHNFGPVQKKFQGWLQEGRIGTEKVLLLKPATFMNESGRSVGEAMRFYKLGMDALVVFHDELDLAPFKVKVKQGGGTAGHNGLRSIDKHL--GPDFLRVRLGIGHPGHKDRVTGHVLGNFAKSEQDDL 157
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_FRAP2 (Peptidyl-tRNA hydrolase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=pth PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.348e-27 Identity = 69/167 (41.32%), Postives = 100/167 (59.88%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEA--EGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGV 642 +IVGLGN GK+Y TRHNVG + IA+ E S++S + K I ++L P TFMN SG +V + ++YKI +++LV+ D+LD+ ++RL GGHGGHNG+RSI H G+ ++ RLRIGIG P K N+VL S ++ ++D G+ Sbjct: 6 MIVGLGNIGKEYENTRHNVGEWFIAKIAKDNNENFSLNS-KLNCNIAKVNINYNNIILVFPTTFMNNSGLAVSKVANFYKIEPEEILVVHDELDIDSGEIRLKKGGGHGGHNGLRSIHQHL-GTNDYLRLRIGIGHPGHKSKVSNYVLSNPSVAQKNDIDNAIDNGI 170
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_CAMHC (Peptidyl-tRNA hydrolase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=pth PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.348e-27 Identity = 73/178 (41.01%), Postives = 108/178 (60.67%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAH-FGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFN 678 LIVGLGNPG +Y T+HN+GF ++D + ++ S+ S F+ F KG ++L KPQTFMN SG SV ++ +YK ++++VI DDLDL F +R G GGHNG++S ID+ G+ ++ R+RIGIGR G+ ++ N VL F+ E ++L +AV L+ N Sbjct: 3 LIVGLGNPGNEYKNTKHNIGFMLIDELLSSDFSSLKSSKFQGELFKKG-----EILLLKPQTFMNLSGNSVKAVNDFYK--PERIIVIHDDLDLNFGALRFKRGGSSGGHNGIKS-IDNLIGN-DYERVRIGIGR--GQGNAANIVLSKFNNDEDKKLVEILSTAKKAVEFLIKNDIN 169
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_XYLFA (Peptidyl-tRNA hydrolase OS=Xylella fastidiosa GN=pth PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27 Identity = 73/186 (39.25%), Postives = 106/186 (56.99%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGIS-VSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNT 702 LIVGLGNPG ++ TRHN GF VD + + EG + AH + FI V L +P TFMN SG+S+ + +S++KI +Q+LV D+LD P +RL GGHGG NG+R I G F RLR+GIG P K VN+VL + +E +D ++ + +++ F++A ++T Sbjct: 6 LIVGLGNPGSEHTKTRHNAGFRFVDGLVQREGQRWMLESKLFAHVARVFIAGQWVWLLRPVTFMNLSGKSICAGLSFWKIKPEQMLVAHDELDFPPGAVRLKFDGGHGGQNGLRD-ITKLLGHGRFHRLRVGIGHPGHKDRVVNWVLGCPTCEENIAIDAALERASAVLPLVVAGDFDEAMKKLHT 190 The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bpback to top |