FC873342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_VIBHB (Peptidyl-tRNA hydrolase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=pth PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27 Identity = 66/188 (35.11%), Postives = 105/188 (55.85%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSV-NFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 L+VGL NPG +Y TRHN G +V+ +A +++ + F G+ + + L P TFMN SG+++ ++ +Y+I ++++V D+LDL + GGHGGHNG+R I +++F RLRIGIG P K FVL +E++ LD + V + IL+ +G +KA ++T K Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARVHNVTLKNEPKFFGLTGRIMVNGQDLRLLIPTTFMNLSGKAIAALAKFYQIKPEEIMVAHDELDLLPGVAKFKKGGGHGGHNGLRDTISKLGNNKDFYRLRIGIGHPGHKDKVAGFVLGKAPAKEQELLDAAADESVRCLDILIKDGLSKAQNRLHTFK 194
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SALTY (Peptidyl-tRNA hydrolase OS=Salmonella typhimurium GN=pth PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27 Identity = 71/188 (37.77%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISV-SSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGL NPG +Y TRHN G VD +AE + F + + + V L P TFMN SG++VG++ S+Y+I ++LV D+LDLP + GGHGGHNG++ II + F RLR+GIG P K V FVL E++ +D + + EG KA + ++T K Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMASFYRIQPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLAKATSRLHTFK 192
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SALTI (Peptidyl-tRNA hydrolase OS=Salmonella typhi GN=pth PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27 Identity = 71/188 (37.77%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISV-SSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGL NPG +Y TRHN G VD +AE + F + + + V L P TFMN SG++VG++ S+Y+I ++LV D+LDLP + GGHGGHNG++ II + F RLR+GIG P K V FVL E++ +D + + EG KA + ++T K Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMASFYRIQPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLAKATSRLHTFK 192
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SALSV (Peptidyl-tRNA hydrolase OS=Salmonella schwarzengrund (strain CVM19633) GN=pth PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27 Identity = 71/188 (37.77%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISV-SSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGL NPG +Y TRHN G VD +AE + F + + + V L P TFMN SG++VG++ S+Y+I ++LV D+LDLP + GGHGGHNG++ II + F RLR+GIG P K V FVL E++ +D + + EG KA + ++T K Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMASFYRIQPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLAKATSRLHTFK 192
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SALPA (Peptidyl-tRNA hydrolase OS=Salmonella paratyphi A GN=pth PE=3 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27 Identity = 71/188 (37.77%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISV-SSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGL NPG +Y TRHN G VD +AE + F + + + V L P TFMN SG++VG++ S+Y+I ++LV D+LDLP + GGHGGHNG++ II + F RLR+GIG P K V FVL E++ +D + + EG KA + ++T K Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMASFYRIQPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLAKATSRLHTFK 192
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SALNS (Peptidyl-tRNA hydrolase OS=Salmonella newport (strain SL254) GN=pth PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27 Identity = 71/188 (37.77%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISV-SSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGL NPG +Y TRHN G VD +AE + F + + + V L P TFMN SG++VG++ S+Y+I ++LV D+LDLP + GGHGGHNG++ II + F RLR+GIG P K V FVL E++ +D + + EG KA + ++T K Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMASFYRIQPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLAKATSRLHTFK 192
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SALHS (Peptidyl-tRNA hydrolase OS=Salmonella heidelberg (strain SL476) GN=pth PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27 Identity = 71/188 (37.77%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISV-SSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGL NPG +Y TRHN G VD +AE + F + + + V L P TFMN SG++VG++ S+Y+I ++LV D+LDLP + GGHGGHNG++ II + F RLR+GIG P K V FVL E++ +D + + EG KA + ++T K Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMASFYRIQPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKSKVVGFVLGKPPVSEQKLIDEAIYEAARCTELWFKEGLAKATSRLHTFK 192
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SALG2 (Peptidyl-tRNA hydrolase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=pth PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27 Identity = 71/188 (37.77%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISV-SSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGL NPG +Y TRHN G VD +AE + F + + + V L P TFMN SG++VG++ S+Y+I ++LV D+LDLP + GGHGGHNG++ II + F RLR+GIG P K V FVL E++ +D + + EG KA + ++T K Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMASFYRIQPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLAKATSRLHTFK 192
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SALEP (Peptidyl-tRNA hydrolase OS=Salmonella enteritidis PT4 (strain P125109) GN=pth PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27 Identity = 71/188 (37.77%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISV-SSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGL NPG +Y TRHN G VD +AE + F + + + V L P TFMN SG++VG++ S+Y+I ++LV D+LDLP + GGHGGHNG++ II + F RLR+GIG P K V FVL E++ +D + + EG KA + ++T K Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMASFYRIQPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLAKATSRLHTFK 192
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SALDC (Peptidyl-tRNA hydrolase OS=Salmonella dublin (strain CT_02021853) GN=pth PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27 Identity = 71/188 (37.77%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISV-SSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGL NPG +Y TRHN G VD +AE + F + + + V L P TFMN SG++VG++ S+Y+I ++LV D+LDLP + GGHGGHNG++ II + F RLR+GIG P K V FVL E++ +D + + EG KA + ++T K Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGTMASFYRIQPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLAKATSRLHTFK 192 The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bpback to top |