FC873342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SALA4 (Peptidyl-tRNA hydrolase OS=Salmonella agona (strain SL483) GN=pth PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27 Identity = 71/188 (37.77%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISV-SSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGL NPG +Y TRHN G VD +AE + F + + + V L P TFMN SG++VG++ S+Y+I ++LV D+LDLP + GGHGGHNG++ II + F RLR+GIG P K V FVL E++ +D + + EG KA + ++T K Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMASFYRIQPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLAKATSRLHTFK 192
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_RICAE (Peptidyl-tRNA hydrolase OS=Rickettsia africae (strain ESF-5) GN=pth PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27 Identity = 74/188 (39.36%), Postives = 107/188 (56.91%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVN-FKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRI---LLLEGFNKAATFVN 699 L++GLGNPGK+Y TRHNVGF ++ IA S S+ F + ++ KP T+MN SG+SV S+ +YY I ++ VI DD+DL +++ GG+GGHNG++S ID G+ + R+RIG+GRP D ++VL FSK E + T Q ++ + L+LE NK F N Sbjct: 3 LVIGLGNPGKEYQYTRHNVGFIAIEKIANQYNSSFSTKKKFNCEIAETISDGQKIIFIKPTTYMNLSGKSVISVKTYYNIYPAKIFVIHDDIDLDTGRIKFKTGGGNGGHNGLKS-IDGVIGN-NYNRIRIGVGRPQNNQDVADYVLNHFSKPEYE----TVMQAIDRITSNFGLILE--NKLEEFKN 182
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_METSB (Peptidyl-tRNA hydrolase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=pth PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27 Identity = 69/158 (43.67%), Postives = 95/158 (60.13%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPV-----MLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQE 606 L+VGLGNPGK Y G RHN+GF +D IA S+ F++ F G I + + +L PQT+MN SG+SVG Y KI K ++V+ D+LDLP K+R+ GG+ GHNG++SI H E+ R+R+GIG P + N+VL F+K E Sbjct: 3 LLVGLGNPGKAYAGNRHNIGFMALDQIAR----DYSAPPFRSKFN-GLISEITLAGERCVLLAPQTYMNDSGRSVGEAARYLKIEPKDIVVLHDELDLPAGKVRVKTGGGNAGHNGLKSITAHI--GNEYRRVRLGIGHPGDRALVHNYVLGDFAKSE 153
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_EDWI9 (Peptidyl-tRNA hydrolase OS=Edwardsiella ictaluri (strain 93-146) GN=pth PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27 Identity = 70/185 (37.84%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVN-FKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 LIVGL NPG +Y TRHN G VDA+AE G S+ + F + + + + L P TFMN SG++V ++ +Y+I ++LV D+LDLP +L GG+GGHNG++ I + F RLRIGIG P K V FVL E+ +D + + +L+ +G +KA +N Sbjct: 5 LIVGLANPGAEYAQTRHNAGAWFVDALAERHGQSLKEESKFFGYTARLSLAGHDLRLLVPTTFMNLSGKAVSALAGFYRIAPDEILVAHDELDLPPGVAKLKLGGGNGGHNGLKDIQSKLGNNPNFHRLRIGIGHPGDKSKVVGFVLGKPLASEQPLIDDAIDEALRCTDLLMQDGMDKAMNRLN 189
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_DECAR (Peptidyl-tRNA hydrolase OS=Dechloromonas aromatica (strain RCB) GN=pth PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.761e-27 Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPG---KMDSVNFVLRPFSKQERQELD 621 P LIVGLGNPG +Y TRHNVGF VD +A+ +S++ +A F L +P TFMN SGQ+V ++ ++YKIP ++LVI D+LDLP +RL GG+GGHNG++ I G+ +F RLR+GIG P V+FVL K+E +++ Sbjct: 4 PRLIVGLGNPGPEYEATRHNVGFWFVDQLADKLKVSLAP---QAKFFGRAARTGETWLLQPTTFMNRSGQAVAALANFYKIPADEILVIHDELDLPPGGIRLKQGGGNGGHNGLKDIQAKL-GTPDFWRLRLGIGHPRTLNLSQQVVDFVLHQPRKEELPDIE 162
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SHIB3 (Peptidyl-tRNA hydrolase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=pth PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.300e-27 Identity = 70/188 (37.23%), Postives = 98/188 (52.13%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISV-SSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGL NPG +Y TRHN G VD +AE + F + + +G V L P TFMN SG++V ++ S+++I ++LV D+LDLP +L GGHGGHNG++ II + F RLRIGIG P K V FVL E++ +D + + +G KA ++ K Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKLKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLTKATNRLHAFK 192
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SHELP (Peptidyl-tRNA hydrolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=pth PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.300e-27 Identity = 68/180 (37.78%), Postives = 100/180 (55.56%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGIS-VSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKA 684 LIVGL NPG +Y TRHN G V+ +A G+S V+ + + + V L P TFMN SG+SVG++ ++++I ++LV D+LD+P + GGHGGHNG++ II + F RLRIGIG P K N+VL + E++ ++ + V A +L E +KA Sbjct: 6 LIVGLANPGDKYEQTRHNAGAWYVNELARVCGVSLVADSKYYGLTARATLYGKDVRLLIPTTFMNLSGKSVGALANFFRIAPDEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIAKLANDKGFYRLRIGIGHPGDKSMVSNYVLGKAPQTEQRLIEEVIDEAVRATEVLFKEDMSKA 185
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SALPB (Peptidyl-tRNA hydrolase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=pth PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.300e-27 Identity = 70/188 (37.23%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISV-SSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGL NPG +Y TRHN G +D +AE + F + + + V L P TFMN SG++VG++ S+Y+I ++LV D+LDLP + GGHGGHNG++ II + F RLR+GIG P K V FVL E++ +D + + EG KA + ++T K Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYIDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMASFYRIQPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLAKATSRLHTFK 192
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_RICPU (Peptidyl-tRNA hydrolase OS=Rickettsia peacockii (strain Rustic) GN=pth PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.300e-27 Identity = 74/188 (39.36%), Postives = 107/188 (56.91%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVN-FKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRI---LLLEGFNKAATFVN 699 L++GLGNPGK+Y TRHNVGF ++ IA S S+ F + ++ KP T+MN SG+SV S+ +YY I ++ VI DD+DL +++ GG+GGHNG++S ID G+ + R+RIG+GRP D ++VL FSK E + T Q ++ + L+LE NK F N Sbjct: 3 LVIGLGNPGKEYQYTRHNVGFIAIEKIANQYNSSFSTKKKFNCEIAETISDRQKIIFIKPTTYMNLSGKSVISVKTYYNIYPAKIFVIHDDIDLETGRIKFKTGGGNGGHNGLKS-IDGVIGN-NYNRIRIGVGRPQNNQDVADYVLNHFSKPEYK----TVMQAIDRITSNFGLILE--NKLEEFKN 182
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_PSEF5 (Peptidyl-tRNA hydrolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=pth PE=3 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 2.300e-27 Identity = 70/188 (37.23%), Postives = 105/188 (55.85%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGIS-VSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 LIVGLGNPG +Y TRHN G V+ IAE +GI+ V+ + G+ + L P T+MN SGQ+V ++ +++I +++LV D+LDLP +L GGHGGHNG+R II F RLR+GIG P NFVL + E+++LD + + + + +N+A +++ K Sbjct: 6 LIVGLGNPGTEYEQTRHNAGALFVERIAEKQGINLVADRKYFGLTGRFSHQGQDIRLLIPTTYMNRSGQAVAALAGFFRIKPEEILVAHDELDLPPGVAKLKTGGGHGGHNGLRDIIAQLGNQNTFHRLRLGIGHPGVASMVSNFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNRAMKNLHSQK 193 The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bpback to top |